RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-222	ENST00000534375	SCRIB	Q14160	1630 aa		0.83	□□□□□ -2.28
PICALM-222	ENST00000534375	TENM2	Q9NT68	2774 aa		0.83	□□□□□ -2.28
PICALM-222	ENST00000534375	BSN	Q9UPA5	3926 aa		0.83	□□□□□ -2.28
PICALM-222	ENST00000534375	TNC	P24821	2201 aa		0.83	□□□□□ -2.28
PICALM-222	ENST00000534375	CYB5A	P00167	134 aa		0.83	□□□□□ -2.28
PICALM-222	ENST00000534375	ETDB	Q3ZM63	59 aa		0.83	□□□□□ -2.28
PICALM-222	ENST00000534375	TNRC6C	Q9HCJ0	1690 aa	Known RBP	0.83	□□□□□ -2.28
PICALM-222	ENST00000534375	PKDREJ	Q9NTG1	2253 aa		0.83	□□□□□ -2.28
PICALM-222	ENST00000534375	SYNE2	Q8WXH0	6885 aa	Known RBP	0.83	□□□□□ -2.28
PICALM-222	ENST00000534375	XRN1	Q8IZH2	1706 aa	Known RBP	0.83	□□□□□ -2.28
PICALM-222	ENST00000534375	STAB2	Q8WWQ8	2551 aa		0.83	□□□□□ -2.28
PICALM-222	ENST00000534375	GLI2	P10070	1586 aa		0.83	□□□□□ -2.28
PICALM-222	ENST00000534375	TARBP1	Q13395	1621 aa	Known RBP	0.82	□□□□□ -2.28
PICALM-222	ENST00000534375	USP32	Q8NFA0	1604 aa		0.82	□□□□□ -2.28
PICALM-222	ENST00000534375	CCDC180	Q9P1Z9	1646 aa		0.82	□□□□□ -2.28
PICALM-222	ENST00000534375	HERC2	O95714	4834 aa		0.82	□□□□□ -2.28
PICALM-222	ENST00000534375	CRYBG1	Q9Y4K1	1723 aa		0.82	□□□□□ -2.28
PICALM-222	ENST00000534375	TRBV6-1	A0A0K0K1D8	114 aa		0.82	□□□□□ -2.28
PICALM-222	ENST00000534375		I3L2K1	104 aa		0.82	□□□□□ -2.28
PICALM-222	ENST00000534375	KRTAP2-3	P0C7H8	128 aa		0.82	□□□□□ -2.28
PICALM-222	ENST00000534375	KRTAP2-4	Q9BYR9	128 aa		0.82	□□□□□ -2.28
PICALM-222	ENST00000534375	KRTAP2-1	Q9BYU5	128 aa		0.82	□□□□□ -2.28
PICALM-222	ENST00000534375	KIAA0586	Q9BVV6	1533 aa		0.82	□□□□□ -2.28
PICALM-222	ENST00000534375	FSIP2	Q5CZC0	6907 aa		0.82	□□□□□ -2.28
PICALM-222	ENST00000534375	HERC1	Q15751	4861 aa		0.82	□□□□□ -2.28
PICALM-222	ENST00000534375	LAMA1	P25391	3075 aa		0.82	□□□□□ -2.28
PICALM-222	ENST00000534375	ADGRG4	Q8IZF6	3080 aa		0.82	□□□□□ -2.28
PICALM-222	ENST00000534375	PLIN4	Q96Q06	1357 aa		0.82	□□□□□ -2.28
PICALM-222	ENST00000534375	DMXL2	Q8TDJ6	3036 aa		0.81	□□□□□ -2.28
PICALM-222	ENST00000534375	CUBN	O60494	3623 aa		0.81	□□□□□ -2.28
PICALM-222	ENST00000534375	SPEN	Q96T58	3664 aa	Known RBP	0.81	□□□□□ -2.28
PICALM-222	ENST00000534375	MACF1	Q9UPN3	7388 aa	Known RBP	0.81	□□□□□ -2.28
PICALM-222	ENST00000534375	ZNF720	Q7Z2F6	126 aa		0.81	□□□□□ -2.28
PICALM-222	ENST00000534375	ACAN	P16112	2415 aa		0.81	□□□□□ -2.28
PICALM-222	ENST00000534375	DMD	P11532	3685 aa		0.81	□□□□□ -2.28
PICALM-222	ENST00000534375	PREX2	Q70Z35	1606 aa		0.81	□□□□□ -2.28
PICALM-222	ENST00000534375	NRXN3	Q9Y4C0	1643 aa		0.81	□□□□□ -2.28
PICALM-222	ENST00000534375	C3	P01024	1663 aa		0.81	□□□□□ -2.28
PICALM-222	ENST00000534375	PKD1L3	Q7Z443	1732 aa		0.81	□□□□□ -2.28
PICALM-222	ENST00000534375	NEXMIF	Q5QGS0	1516 aa		0.8	□□□□□ -2.28
PICALM-222	ENST00000534375	ABCC2	Q92887	1545 aa		0.8	□□□□□ -2.28
PICALM-222	ENST00000534375	TULP4	Q9NRJ4	1543 aa		0.8	□□□□□ -2.28
PICALM-222	ENST00000534375	PAPPA	Q13219	1627 aa		0.8	□□□□□ -2.28
PICALM-222	ENST00000534375		A0A0D9SFI3	127 aa		0.8	□□□□□ -2.28
PICALM-222	ENST00000534375	LINC00959	A0A1B0GUT2	108 aa		0.8	□□□□□ -2.28
PICALM-222	ENST00000534375	CNFN	Q9BYD5	112 aa		0.8	□□□□□ -2.28
PICALM-222	ENST00000534375	ITSN2	Q9NZM3	1697 aa		0.8	□□□□□ -2.28
PICALM-222	ENST00000534375	SVEP1	Q4LDE5	3571 aa		0.8	□□□□□ -2.28
PICALM-222	ENST00000534375	DCAF1	Q9Y4B6	1507 aa		0.79	□□□□□ -2.28
PICALM-222	ENST00000534375	NEB	P20929	6669 aa		0.79	□□□□□ -2.28
PICALM-222	ENST00000534375	FAT4	Q6V0I7	4981 aa		0.79	□□□□□ -2.28
PICALM-222	ENST00000534375	C5	P01031	1676 aa		0.79	□□□□□ -2.28
PICALM-222	ENST00000534375	CENPE	Q02224	2701 aa		0.79	□□□□□ -2.28
PICALM-222	ENST00000534375		H3BQF6	201 aa		0.79	□□□□□ -2.28
PICALM-222	ENST00000534375	LEPROTL1	O95214	131 aa		0.79	□□□□□ -2.28
PICALM-222	ENST00000534375	PEA15	Q15121	130 aa		0.79	□□□□□ -2.28
PICALM-222	ENST00000534375	TP53AIP1	Q9HCN2	124 aa		0.79	□□□□□ -2.28
PICALM-222	ENST00000534375	MGA	Q8IWI9	3026 aa		0.79	□□□□□ -2.28
PICALM-222	ENST00000534375	ABCA8	O94911	1581 aa		0.79	□□□□□ -2.28
PICALM-222	ENST00000534375	ACACA	Q13085	2346 aa		0.78	□□□□□ -2.28
PICALM-222	ENST00000534375	LTN1	O94822	1766 aa		0.78	□□□□□ -2.28
PICALM-222	ENST00000534375		D6R8Y8	96 aa		0.78	□□□□□ -2.28
PICALM-222	ENST00000534375		H0Y9P7	68 aa		0.78	□□□□□ -2.28
PICALM-222	ENST00000534375	HMGN3	Q15651	99 aa		0.78	□□□□□ -2.28
PICALM-222	ENST00000534375	MUSTN1	Q8IVN3	82 aa		0.78	□□□□□ -2.28
PICALM-222	ENST00000534375	PRO0255	Q9UI72	69 aa		0.78	□□□□□ -2.28
PICALM-222	ENST00000534375	KIF14	Q15058	1648 aa		0.78	□□□□□ -2.29
PICALM-222	ENST00000534375	TSC2	P49815	1807 aa		0.78	□□□□□ -2.29
PICALM-222	ENST00000534375	LAMA5	O15230	3695 aa		0.77	□□□□□ -2.29
PICALM-222	ENST00000534375	PRH1	P02810	166 aa		0.77	□□□□□ -2.29
PICALM-222	ENST00000534375	HMGN2	P05204	90 aa	Known RBP	0.77	□□□□□ -2.29
PICALM-222	ENST00000534375	S100A3	P33764	101 aa		0.77	□□□□□ -2.29
PICALM-222	ENST00000534375	WFDC2	Q14508	124 aa		0.77	□□□□□ -2.29
PICALM-222	ENST00000534375	NMS	Q5H8A3	153 aa		0.77	□□□□□ -2.29
PICALM-222	ENST00000534375	C6orf201	Q7Z4U5	140 aa		0.77	□□□□□ -2.29
PICALM-222	ENST00000534375	SPCS1	Q9Y6A9	102 aa		0.77	□□□□□ -2.29
PICALM-222	ENST00000534375	ZC3H13	Q5T200	1668 aa	Known RBP	0.77	□□□□□ -2.29
PICALM-222	ENST00000534375	HIVEP1	P15822	2718 aa		0.76	□□□□□ -2.29
PICALM-222	ENST00000534375	CCDC18	Q5T9S5	1454 aa		0.76	□□□□□ -2.29
PICALM-222	ENST00000534375	PRKDC	P78527	4128 aa	Known RBP	0.76	□□□□□ -2.29
PICALM-222	ENST00000534375		A0A1B0GU69	56 aa		0.76	□□□□□ -2.29
PICALM-222	ENST00000534375	IQCF6	A8MYZ5	107 aa		0.76	□□□□□ -2.29
PICALM-222	ENST00000534375	COL7A1	Q02388	2944 aa		0.76	□□□□□ -2.29
PICALM-222	ENST00000534375	AHNAK2	Q8IVF2	5795 aa		0.76	□□□□□ -2.29
PICALM-222	ENST00000534375		A0A0G2JMZ2	1700 aa		0.75	□□□□□ -2.29
PICALM-222	ENST00000534375	ARHGAP35	Q9NRY4	1499 aa		0.75	□□□□□ -2.29
PICALM-222	ENST00000534375	UACA	Q9BZF9	1416 aa		0.75	□□□□□ -2.29
PICALM-222	ENST00000534375	GNGT1	P63211	74 aa		0.75	□□□□□ -2.29
PICALM-222	ENST00000534375	KIF20B	Q96Q89	1820 aa		0.75	□□□□□ -2.29
PICALM-222	ENST00000534375	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	0.74	□□□□□ -2.29
PICALM-222	ENST00000534375	SLIT1	O75093	1534 aa		0.74	□□□□□ -2.29
PICALM-222	ENST00000534375	KDM5D	Q9BY66	1539 aa		0.74	□□□□□ -2.29
PICALM-222	ENST00000534375	SMIM11A	P58511	58 aa		0.74	□□□□□ -2.29
PICALM-222	ENST00000534375	ALKAL2	Q6UX46	152 aa		0.74	□□□□□ -2.29
PICALM-222	ENST00000534375	RABAC1	Q9UI14	185 aa		0.74	□□□□□ -2.29
PICALM-222	ENST00000534375	UGGT1	Q9NYU2	1555 aa		0.74	□□□□□ -2.29
PICALM-222	ENST00000534375	MAP1A	P78559	2803 aa	Predicted RBP	0.74	□□□□□ -2.29
PICALM-222	ENST00000534375	KNL1	Q8NG31	2342 aa		0.73	□□□□□ -2.29
PICALM-222	ENST00000534375	SCN11A	Q9UI33	1791 aa		0.73	□□□□□ -2.29
PICALM-222	ENST00000534375	QSER1	Q2KHR3	1735 aa		0.73	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 1348 ms