RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 C9orf129Q5T035 196 aaKnown RBP7.03□□□□□ -1.28
TRAPPC4-213ENST00000533149 XP32Q5T750 250 aa7.03□□□□□ -1.28
TRAPPC4-213ENST00000533149 Q8NDZ9 215 aa7.03□□□□□ -1.28
TRAPPC4-213ENST00000533149 A0A0B4J2C4 111 aa7.02□□□□□ -1.28
TRAPPC4-213ENST00000533149 NDUFC2O95298 119 aa7.02□□□□□ -1.28
TRAPPC4-213ENST00000533149 SPINK6Q6UWN8 80 aa7.02□□□□□ -1.28
TRAPPC4-213ENST00000533149 RAB37Q96AX2 223 aa7.02□□□□□ -1.28
TRAPPC4-213ENST00000533149 IGKV2-28A0A075B6P5 120 aa7.01□□□□□ -1.29
TRAPPC4-213ENST00000533149 A0A096LNI7 61 aa7.01□□□□□ -1.29
TRAPPC4-213ENST00000533149 IGKV2D-28P01615 120 aa7.01□□□□□ -1.29
TRAPPC4-213ENST00000533149 PRO1854Q9UHT4 67 aa7.01□□□□□ -1.29
TRAPPC4-213ENST00000533149 PKIGQ9Y2B9 76 aa7.01□□□□□ -1.29
TRAPPC4-213ENST00000533149 IGKV2-24A0A0C4DH68 120 aa7.01□□□□□ -1.29
TRAPPC4-213ENST00000533149 VPREB1P12018 145 aa7.01□□□□□ -1.29
TRAPPC4-213ENST00000533149 SPACA4Q8TDM5 124 aa7.01□□□□□ -1.29
TRAPPC4-213ENST00000533149 PLAC8Q9NZF1 115 aa7.01□□□□□ -1.29
TRAPPC4-213ENST00000533149 TRAV13-2A0A0B4J235 113 aa7□□□□□ -1.29
TRAPPC4-213ENST00000533149 TAX1BP3O14907 124 aa7□□□□□ -1.29
TRAPPC4-213ENST00000533149 NCR3O14931 201 aa7□□□□□ -1.29
TRAPPC4-213ENST00000533149 CHTF8P0CG12 524 aa7□□□□□ -1.29
TRAPPC4-213ENST00000533149 LINC00337Q8N6G1 96 aa7□□□□□ -1.29
TRAPPC4-213ENST00000533149 FAM168BA1KXE4 195 aa6.99□□□□□ -1.29
TRAPPC4-213ENST00000533149 OR13C6PQ8NH95 151 aa6.99□□□□□ -1.29
TRAPPC4-213ENST00000533149 LPAP08519 4548 aa6.98□□□□□ -1.29
TRAPPC4-213ENST00000533149 FAT4Q6V0I7 4981 aa6.98□□□□□ -1.29
TRAPPC4-213ENST00000533149 TRBV10-2A0A0K0K1G8 114 aa6.98□□□□□ -1.29
TRAPPC4-213ENST00000533149 A0A1W2PNN7 141 aa6.98□□□□□ -1.29
TRAPPC4-213ENST00000533149 H7C2G1 150 aa6.98□□□□□ -1.29
TRAPPC4-213ENST00000533149 M0R378 163 aa6.98□□□□□ -1.29
TRAPPC4-213ENST00000533149 RPL13AP40429 203 aaKnown RBP6.98□□□□□ -1.29
TRAPPC4-213ENST00000533149 LBHQ53QV2 105 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC4-213ENST00000533149 KRTAP7-1Q8IUC3 87 aa6.98□□□□□ -1.29
TRAPPC4-213ENST00000533149 IGLV5-37A0A075B6J1 123 aa6.97□□□□□ -1.29
TRAPPC4-213ENST00000533149 LINC00474Q9P2X8 69 aa6.97□□□□□ -1.29
TRAPPC4-213ENST00000533149 C22orf24Q9Y442 160 aa6.97□□□□□ -1.29
TRAPPC4-213ENST00000533149 MUC2Q02817 5179 aa6.96□□□□□ -1.3
TRAPPC4-213ENST00000533149 C9orf118A6NHY6 69 aa6.96□□□□□ -1.3
TRAPPC4-213ENST00000533149 TSPAN13O95857 204 aa6.96□□□□□ -1.3
TRAPPC4-213ENST00000533149 S100A7L2Q5SY68 101 aa6.96□□□□□ -1.3
TRAPPC4-213ENST00000533149 FAM19A5Q7Z5A7 132 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC4-213ENST00000533149 NKAPP1Q8N9T2 125 aa6.96□□□□□ -1.3
TRAPPC4-213ENST00000533149 NAA38Q9BRA0 125 aaKnown RBP6.96□□□□□ -1.3
TRAPPC4-213ENST00000533149 Q1RN00 199 aa6.95□□□□□ -1.3
TRAPPC4-213ENST00000533149 TMEM126AQ9H061 195 aa6.95□□□□□ -1.3
TRAPPC4-213ENST00000533149 TRBV10-3A0A0K0K1G6 114 aa6.94□□□□□ -1.3
TRAPPC4-213ENST00000533149 GAGE10A6NGK3 116 aa6.94□□□□□ -1.3
TRAPPC4-213ENST00000533149 H3BUT2 72 aa6.94□□□□□ -1.3
TRAPPC4-213ENST00000533149 IGLV6-57P01721 117 aa6.94□□□□□ -1.3
TRAPPC4-213ENST00000533149 PSMB2P49721 201 aa6.93□□□□□ -1.3
TRAPPC4-213ENST00000533149 SMIM11BQ8TCY0 68 aa6.93□□□□□ -1.3
TRAPPC4-213ENST00000533149 LINC00167Q96N53 147 aa6.93□□□□□ -1.3
TRAPPC4-213ENST00000533149 MRPL55Q7Z7F7 128 aaKnown RBP6.92□□□□□ -1.3
TRAPPC4-213ENST00000533149 RPL37AP8A6NKH3 93 aa6.91□□□□□ -1.3
TRAPPC4-213ENST00000533149 M0QXV9 152 aa6.91□□□□□ -1.3
TRAPPC4-213ENST00000533149 RPL28P46779 137 aaKnown RBP6.91□□□□□ -1.3
TRAPPC4-213ENST00000533149 PHF5AQ7RTV0 110 aaKnown RBP6.91□□□□□ -1.3
TRAPPC4-213ENST00000533149 IGLV1-50A0A075B6I6 118 aa6.9□□□□□ -1.3
TRAPPC4-213ENST00000533149 A0A1W2PPM0 123 aa6.9□□□□□ -1.3
TRAPPC4-213ENST00000533149 TRIAP1O43715 76 aa6.9□□□□□ -1.3
TRAPPC4-213ENST00000533149 SCGB1C2P0DMR2 95 aa6.9□□□□□ -1.3
TRAPPC4-213ENST00000533149 PSORS1C2Q9UIG4 136 aa6.9□□□□□ -1.3
TRAPPC4-213ENST00000533149 TRAV23DV6A0A075B6W5 121 aa6.89□□□□□ -1.31
TRAPPC4-213ENST00000533149 A0A1B0GV90 55 aa6.88□□□□□ -1.31
TRAPPC4-213ENST00000533149 COX6CP09669 75 aa6.88□□□□□ -1.31
TRAPPC4-213ENST00000533149 FABP2P12104 132 aa6.88□□□□□ -1.31
TRAPPC4-213ENST00000533149 KCNQ1DNQ9H478 68 aa6.88□□□□□ -1.31
TRAPPC4-213ENST00000533149 CBY1Q9Y3M2 126 aa6.88□□□□□ -1.31
TRAPPC4-213ENST00000533149 VAMP3Q15836 100 aa6.87□□□□□ -1.31
TRAPPC4-213ENST00000533149 PRR4Q16378 134 aa6.87□□□□□ -1.31
TRAPPC4-213ENST00000533149 C6orf99Q4VX62 202 aa6.87□□□□□ -1.31
TRAPPC4-213ENST00000533149 PRYO14603 147 aa6.86□□□□□ -1.31
TRAPPC4-213ENST00000533149 ZNF73O43830 326 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC4-213ENST00000533149 UBE2BP63146 152 aa6.86□□□□□ -1.31
TRAPPC4-213ENST00000533149 CRCT1Q9UGL9 99 aa6.86□□□□□ -1.31
TRAPPC4-213ENST00000533149 H0YGX0 51 aa6.85□□□□□ -1.31
TRAPPC4-213ENST00000533149 LYRM7Q5U5X0 104 aa6.85□□□□□ -1.31
TRAPPC4-213ENST00000533149 KRTAP11-1Q8IUC1 163 aa6.85□□□□□ -1.31
TRAPPC4-213ENST00000533149 DIRC1Q969H9 104 aa6.85□□□□□ -1.31
TRAPPC4-213ENST00000533149 CLEC2BQ92478 149 aa6.84□□□□□ -1.31
TRAPPC4-213ENST00000533149 SPCS1Q9Y6A9 102 aa6.84□□□□□ -1.31
TRAPPC4-213ENST00000533149 TRBV7-6A0A0J9YX20 115 aa6.83□□□□□ -1.32
TRAPPC4-213ENST00000533149 TCL1BO95988 128 aa6.83□□□□□ -1.32
TRAPPC4-213ENST00000533149 COX7BP24311 80 aa6.83□□□□□ -1.32
TRAPPC4-213ENST00000533149 SPRR1AP35321 89 aa6.83□□□□□ -1.32
TRAPPC4-213ENST00000533149 TRBV20-1A0A075B6N2 111 aa6.82□□□□□ -1.32
TRAPPC4-213ENST00000533149 K7EP34 96 aa6.82□□□□□ -1.32
TRAPPC4-213ENST00000533149 FAM218AQ96MZ4 157 aa6.82□□□□□ -1.32
TRAPPC4-213ENST00000533149 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
TRAPPC4-213ENST00000533149 ETDCA0A1B0GVM5 59 aa6.81□□□□□ -1.32
TRAPPC4-213ENST00000533149 KRTAP4-16G5E9R7 235 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC4-213ENST00000533149 PRR26Q8N8Z3 221 aa6.81□□□□□ -1.32
TRAPPC4-213ENST00000533149 B5MCH6 92 aa6.8□□□□□ -1.32
TRAPPC4-213ENST00000533149 LST1O00453 97 aa6.8□□□□□ -1.32
TRAPPC4-213ENST00000533149 ELOF1P60002 83 aaKnown RBP6.8□□□□□ -1.32
TRAPPC4-213ENST00000533149 ATXN8Q156A1 80 aa6.8□□□□□ -1.32
TRAPPC4-213ENST00000533149 LINC00575Q6W349 94 aa6.8□□□□□ -1.32
TRAPPC4-213ENST00000533149 GTF2H5Q6ZYL4 71 aa6.8□□□□□ -1.32
TRAPPC4-213ENST00000533149 H3BMG7 143 aa6.78□□□□□ -1.32
TRAPPC4-213ENST00000533149 UBE2V1Q13404 147 aa6.78□□□□□ -1.32
TRAPPC4-213ENST00000533149 FAM19A1Q7Z5A9 133 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms