RNA–Protein interactions for RNA: ENST00000532542.1

TRIM3-211, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 4,419 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-211ENST00000532542 LINC00846Q9NV44 126 aa7.3□□□□□ -1.24
TRIM3-211ENST00000532542 NBPF19A0A087WUL8 3843 aa7.29□□□□□ -1.24
TRIM3-211ENST00000532542 CDK2AP2O75956 126 aa7.29□□□□□ -1.24
TRIM3-211ENST00000532542 C9orf129Q5T035 196 aaKnown RBP7.29□□□□□ -1.24
TRIM3-211ENST00000532542 SERTAD4-AS1Q5TG53 156 aa7.29□□□□□ -1.24
TRIM3-211ENST00000532542 KCNQ1DNQ9H478 68 aa7.29□□□□□ -1.24
TRIM3-211ENST00000532542 PLA2G2DQ9UNK4 145 aa7.28□□□□□ -1.24
TRIM3-211ENST00000532542 Q6ZRX8 168 aa7.28□□□□□ -1.24
TRIM3-211ENST00000532542 CASC10Q5T4H9 136 aa7.28□□□□□ -1.24
TRIM3-211ENST00000532542 TENM1Q9UKZ4 2725 aa7.27□□□□□ -1.25
TRIM3-211ENST00000532542 C3orf84H3BNL1 204 aa7.27□□□□□ -1.25
TRIM3-211ENST00000532542 IGLV5-52A0A0A0MRZ9 124 aa7.26□□□□□ -1.25
TRIM3-211ENST00000532542 TRBV7-7A0A0K0K1E9 115 aa7.26□□□□□ -1.25
TRIM3-211ENST00000532542 C1orf137Q5JT78 98 aa7.26□□□□□ -1.25
TRIM3-211ENST00000532542 LINC00528Q8N1L1 170 aa7.26□□□□□ -1.25
TRIM3-211ENST00000532542 NBEAL1Q6ZS30 2694 aa7.26□□□□□ -1.25
TRIM3-211ENST00000532542 KRTAP26-1Q6PEX3 210 aa7.26□□□□□ -1.25
TRIM3-211ENST00000532542 SMIM20Q8N5G0 67 aa7.26□□□□□ -1.25
TRIM3-211ENST00000532542 FAM168BA1KXE4 195 aa7.25□□□□□ -1.25
TRIM3-211ENST00000532542 B5MCH6 92 aa7.25□□□□□ -1.25
TRIM3-211ENST00000532542 IGLV1-50A0A075B6I6 118 aa7.25□□□□□ -1.25
TRIM3-211ENST00000532542 A0A096LNI7 61 aa7.25□□□□□ -1.25
TRIM3-211ENST00000532542 ZNF706Q9Y5V0 76 aaPredicted RBP7.25□□□□□ -1.25
TRIM3-211ENST00000532542 LOC110117498A0A087WWA1 95 aa7.24□□□□□ -1.25
TRIM3-211ENST00000532542 CNBPP62633 177 aaKnown RBP7.24□□□□□ -1.25
TRIM3-211ENST00000532542 PRLHP81277 87 aa7.24□□□□□ -1.25
TRIM3-211ENST00000532542 SCXQ7RTU7 201 aa7.24□□□□□ -1.25
TRIM3-211ENST00000532542 Q6ZQT0 140 aa7.23□□□□□ -1.25
TRIM3-211ENST00000532542 SMCR5Q8TEV8 140 aa7.22□□□□□ -1.25
TRIM3-211ENST00000532542 UQCRQO14949 82 aa7.21□□□□□ -1.25
TRIM3-211ENST00000532542 Q6ZVQ6 151 aa7.21□□□□□ -1.25
TRIM3-211ENST00000532542 WWC2-AS2Q96NR7 200 aa7.21□□□□□ -1.25
TRIM3-211ENST00000532542 NDUFB1O75438 58 aa7.21□□□□□ -1.26
TRIM3-211ENST00000532542 C9orf163Q8N9P6 203 aa7.21□□□□□ -1.26
TRIM3-211ENST00000532542 Q8NDZ9 215 aa7.21□□□□□ -1.26
TRIM3-211ENST00000532542 VWFP04275 2813 aa7.21□□□□□ -1.26
TRIM3-211ENST00000532542 IGLV5-37A0A075B6J1 123 aa7.2□□□□□ -1.26
TRIM3-211ENST00000532542 SS18L2Q9UHA2 77 aa7.2□□□□□ -1.26
TRIM3-211ENST00000532542 CHTF8P0CG12 524 aa7.2□□□□□ -1.26
TRIM3-211ENST00000532542 VPS13CQ709C8 3753 aa7.2□□□□□ -1.26
TRIM3-211ENST00000532542 PHF5AQ7RTV0 110 aaKnown RBP7.2□□□□□ -1.26
TRIM3-211ENST00000532542 Q9BRP9 147 aa7.19□□□□□ -1.26
TRIM3-211ENST00000532542 ANK3Q12955 4377 aaKnown RBP7.19□□□□□ -1.26
TRIM3-211ENST00000532542 RTL8CO15255 209 aa7.18□□□□□ -1.26
TRIM3-211ENST00000532542 A0A1B0GW54 56 aa7.18□□□□□ -1.26
TRIM3-211ENST00000532542 A0A087WVE0 104 aa7.18□□□□□ -1.26
TRIM3-211ENST00000532542 SERP2Q8N6R1 65 aa7.18□□□□□ -1.26
TRIM3-211ENST00000532542 C3orf22Q8N5N4 141 aa7.17□□□□□ -1.26
TRIM3-211ENST00000532542 OBSCN-AS1Q96MR7 158 aa7.17□□□□□ -1.26
TRIM3-211ENST00000532542 LINC01547P58512 204 aaPredicted RBP7.17□□□□□ -1.26
TRIM3-211ENST00000532542 CXCL6P80162 114 aa7.17□□□□□ -1.26
TRIM3-211ENST00000532542 ST20-AS1Q8NBB2 130 aa7.16□□□□□ -1.26
TRIM3-211ENST00000532542 A0A087WTM6 91 aa7.16□□□□□ -1.26
TRIM3-211ENST00000532542 STAB2Q8WWQ8 2551 aa7.15□□□□□ -1.26
TRIM3-211ENST00000532542 COX7CP15954 63 aa7.15□□□□□ -1.26
TRIM3-211ENST00000532542 EPM2AB3EWF7 344 aa7.15□□□□□ -1.27
TRIM3-211ENST00000532542 IGLV9-49A0A0B4J1Y8 123 aa7.14□□□□□ -1.27
TRIM3-211ENST00000532542 KRTAP1-5Q9BYS1 174 aa7.13□□□□□ -1.27
TRIM3-211ENST00000532542 A0A1W2PNN7 141 aa7.13□□□□□ -1.27
TRIM3-211ENST00000532542 H0Y9J4 135 aa7.13□□□□□ -1.27
TRIM3-211ENST00000532542 BCE1O60756 84 aa7.13□□□□□ -1.27
TRIM3-211ENST00000532542 TRBV7-4A0A0J9YYF1 115 aa7.13□□□□□ -1.27
TRIM3-211ENST00000532542 CCDC179H3BU77 68 aa7.13□□□□□ -1.27
TRIM3-211ENST00000532542 Q8NBF4 154 aa7.13□□□□□ -1.27
TRIM3-211ENST00000532542 Q8N377 158 aa7.13□□□□□ -1.27
TRIM3-211ENST00000532542 C20orf197Q8N268 126 aa7.11□□□□□ -1.27
TRIM3-211ENST00000532542 A0A087WSZ3 146 aa7.11□□□□□ -1.27
TRIM3-211ENST00000532542 LINC00476Q8WZB0 136 aa7.1□□□□□ -1.27
TRIM3-211ENST00000532542 C4orf48Q5BLP8 95 aa7.09□□□□□ -1.27
TRIM3-211ENST00000532542 LRCOL1A6NCL2 159 aa7.09□□□□□ -1.27
TRIM3-211ENST00000532542 MP68P56378 58 aa7.09□□□□□ -1.27
TRIM3-211ENST00000532542 TRAV7A0A075B6U4 112 aa7.09□□□□□ -1.28
TRIM3-211ENST00000532542 TENM3Q9P273 2699 aa7.07□□□□□ -1.28
TRIM3-211ENST00000532542 SPRR1AP35321 89 aa7.07□□□□□ -1.28
TRIM3-211ENST00000532542 ZNF469Q96JG9 3925 aaPredicted RBP7.06□□□□□ -1.28
TRIM3-211ENST00000532542 NDUFS5O43920 106 aa7.06□□□□□ -1.28
TRIM3-211ENST00000532542 ERC2-IT1O76042 136 aa7.06□□□□□ -1.28
TRIM3-211ENST00000532542 HRCT1Q6UXD1 115 aa7.06□□□□□ -1.28
TRIM3-211ENST00000532542 IGLV5-48A0A075B6I7 105 aa7.05□□□□□ -1.28
TRIM3-211ENST00000532542 WFDC13Q8IUB5 93 aa7.04□□□□□ -1.28
TRIM3-211ENST00000532542 J3KT08 172 aa7.03□□□□□ -1.28
TRIM3-211ENST00000532542 Q8N9L7 120 aa7.03□□□□□ -1.28
TRIM3-211ENST00000532542 NDUFC1O43677 76 aa7.02□□□□□ -1.29
TRIM3-211ENST00000532542 ZFHX3Q15911 3703 aa7.02□□□□□ -1.29
TRIM3-211ENST00000532542 TMEM258P61165 79 aa7.01□□□□□ -1.29
TRIM3-211ENST00000532542 FBN1P35555 2871 aaKnown RBP7.01□□□□□ -1.29
TRIM3-211ENST00000532542 IGFL1Q6UW32 110 aa7.01□□□□□ -1.29
TRIM3-211ENST00000532542 DEFB116Q30KQ4 102 aa7□□□□□ -1.29
TRIM3-211ENST00000532542 CIRBP-AS1Q8TBR5 109 aa7□□□□□ -1.29
TRIM3-211ENST00000532542 MOBPQ13875 183 aa7□□□□□ -1.29
TRIM3-211ENST00000532542 SPACA4Q8TDM5 124 aa7□□□□□ -1.29
TRIM3-211ENST00000532542 ZNF861PO60384 105 aa6.99□□□□□ -1.29
TRIM3-211ENST00000532542 CRYGAP11844 174 aa6.99□□□□□ -1.29
TRIM3-211ENST00000532542 SPINK6Q6UWN8 80 aa6.99□□□□□ -1.29
TRIM3-211ENST00000532542 IGKV4-1P06312 121 aa6.99□□□□□ -1.29
TRIM3-211ENST00000532542 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.99□□□□□ -1.29
TRIM3-211ENST00000532542 SNURFQ9Y675 71 aa6.98□□□□□ -1.29
TRIM3-211ENST00000532542 A0A1W2PNM2 257 aa6.98□□□□□ -1.29
TRIM3-211ENST00000532542 HCG22E2RYF7 251 aa6.98□□□□□ -1.29
TRIM3-211ENST00000532542 FAM30AQ9NZY2 134 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms