RNA–Protein interactions for RNA: ENST00000530520.5

ME3-209, Transcript of malic enzyme 3, humanhuman

TSL 5

Gene ME3, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-209ENST00000530520 RYR1P21817 5038 aa15.3■□□□□ 0.04
ME3-209ENST00000530520 A0A1B0GWB2 263 aa15.3■□□□□ 0.04
ME3-209ENST00000530520 FAM229AH3BQW9 127 aa15.28■□□□□ 0.04
ME3-209ENST00000530520 ZNF73O43830 326 aaPredicted RBP15.28■□□□□ 0.04
ME3-209ENST00000530520 SMIM11BQ8TCY0 68 aa15.28■□□□□ 0.04
ME3-209ENST00000530520 Q1RN00 199 aa15.27■□□□□ 0.03
ME3-209ENST00000530520 BCE1O60756 84 aa15.26■□□□□ 0.03
ME3-209ENST00000530520 SPRR1AP35321 89 aa15.26■□□□□ 0.03
ME3-209ENST00000530520 DIRC1Q969H9 104 aa15.26■□□□□ 0.03
ME3-209ENST00000530520 ETDCA0A1B0GVM5 59 aa15.25■□□□□ 0.03
ME3-209ENST00000530520 C6orf99Q4VX62 202 aa15.25■□□□□ 0.03
ME3-209ENST00000530520 FAM19A1Q7Z5A9 133 aa15.25■□□□□ 0.03
ME3-209ENST00000530520 HSPG2P98160 4391 aa15.25■□□□□ 0.03
ME3-209ENST00000530520 Q5VSD8 79 aa15.24■□□□□ 0.03
ME3-209ENST00000530520 PLA2G1BP04054 148 aaKnown RBP15.23■□□□□ 0.03
ME3-209ENST00000530520 UBE2AP49459 152 aa15.22■□□□□ 0.03
ME3-209ENST00000530520 Q8N1X5 172 aa15.21■□□□□ 0.03
ME3-209ENST00000530520 KRTAP4-16G5E9R7 235 aaPredicted RBP15.2■□□□□ 0.02
ME3-209ENST00000530520 IGLV7-43P04211 117 aa15.2■□□□□ 0.02
ME3-209ENST00000530520 RPL28P46779 137 aaKnown RBP15.2■□□□□ 0.02
ME3-209ENST00000530520 SNHG12Q9BXW3 62 aa15.2■□□□□ 0.02
ME3-209ENST00000530520 PRLHP81277 87 aa15.19■□□□□ 0.02
ME3-209ENST00000530520 TSPAN13O95857 204 aa15.18■□□□□ 0.02
ME3-209ENST00000530520 B5MCH6 92 aa15.17■□□□□ 0.02
ME3-209ENST00000530520 COX7BP24311 80 aa15.16■□□□□ 0.02
ME3-209ENST00000530520 KRTAP10-4P60372 401 aaPredicted RBP15.15■□□□□ 0.02
ME3-209ENST00000530520 VAMP3Q15836 100 aa15.15■□□□□ 0.02
ME3-209ENST00000530520 Q6ZRX8 168 aa15.15■□□□□ 0.02
ME3-209ENST00000530520 KRTAP17-1Q9BYP8 105 aa15.15■□□□□ 0.02
ME3-209ENST00000530520 PSMB2P49721 201 aa15.15■□□□□ 0.02
ME3-209ENST00000530520 TRBV7-6A0A0J9YX20 115 aa15.14■□□□□ 0.01
ME3-209ENST00000530520 ELOF1P60002 83 aaKnown RBP15.14■□□□□ 0.01
ME3-209ENST00000530520 ZNF861PO60384 105 aa15.13■□□□□ 0.01
ME3-209ENST00000530520 KRTAP13-1Q8IUC0 172 aa15.13■□□□□ 0.01
ME3-209ENST00000530520 VPS13BQ7Z7G8 4022 aa15.13■□□□□ 0.01
ME3-209ENST00000530520 FAT1Q14517 4588 aa15.12■□□□□ 0.01
ME3-209ENST00000530520 H0Y9J4 135 aa15.12■□□□□ 0.01
ME3-209ENST00000530520 TRIAP1O43715 76 aa15.11■□□□□ 0.01
ME3-209ENST00000530520 HIGD2AQ9BW72 106 aa15.11■□□□□ 0.01
ME3-209ENST00000530520 NAA38Q9BRA0 125 aaKnown RBP15.07■□□□□ 0
ME3-209ENST00000530520 Q9BRP9 147 aa15.07■□□□□ 0
ME3-209ENST00000530520 COX6CP09669 75 aa15.07■□□□□ 0
ME3-209ENST00000530520 COL5A1-AS1Q5SY13 56 aa15.07■□□□□ 0
ME3-209ENST00000530520 SRRM2Q9UQ35 2752 aaKnown RBP15.06■□□□□ 0
ME3-209ENST00000530520 SMCR5Q8TEV8 140 aa15.06■□□□□ 0
ME3-209ENST00000530520 H0YGX0 51 aa15.05■□□□□ -0
ME3-209ENST00000530520 DHRS4-AS1Q9P1J3 65 aa15.05■□□□□ -0
ME3-209ENST00000530520 TAX1BP3O14907 124 aa15.04■□□□□ -0
ME3-209ENST00000530520 SPINK6Q6UWN8 80 aa15.04■□□□□ -0
ME3-209ENST00000530520 SLC25A20O43772 301 aa15.02■□□□□ -0
ME3-209ENST00000530520 SCGB1C2P0DMR2 95 aa15.02■□□□□ -0
ME3-209ENST00000530520 INAFM2P0DMQ5 153 aa15.02□□□□□ -0.01
ME3-209ENST00000530520 LINC00575Q6W349 94 aa15.02□□□□□ -0.01
ME3-209ENST00000530520 H3BUT2 72 aa15.01□□□□□ -0.01
ME3-209ENST00000530520 ERC2-IT1O76042 136 aa15□□□□□ -0.01
ME3-209ENST00000530520 C9orf118A6NHY6 69 aa14.99□□□□□ -0.01
ME3-209ENST00000530520 CLEC2BQ92478 149 aa14.98□□□□□ -0.01
ME3-209ENST00000530520 hADV29S1A0JD25 119 aa14.98□□□□□ -0.01
ME3-209ENST00000530520 FAM218AQ96MZ4 157 aa14.97□□□□□ -0.01
ME3-209ENST00000530520 HERC2O95714 4834 aa14.96□□□□□ -0.01
ME3-209ENST00000530520 KRTAP4-5Q9BYR2 181 aa14.96□□□□□ -0.01
ME3-209ENST00000530520 SNCGO76070 127 aa14.95□□□□□ -0.02
ME3-209ENST00000530520 LYRM7Q5U5X0 104 aa14.94□□□□□ -0.02
ME3-209ENST00000530520 ZNF706Q9Y5V0 76 aaPredicted RBP14.93□□□□□ -0.02
ME3-209ENST00000530520 ST20-AS1Q8NBB2 130 aa14.91□□□□□ -0.02
ME3-209ENST00000530520 A0A1W2PPM0 123 aa14.9□□□□□ -0.02
ME3-209ENST00000530520 A0A1B0GX51 115 aa14.9□□□□□ -0.02
ME3-209ENST00000530520 Q6ZQY7 126 aa14.89□□□□□ -0.03
ME3-209ENST00000530520 SPRR4Q96PI1 79 aa14.89□□□□□ -0.03
ME3-209ENST00000530520 FABP2P12104 132 aa14.88□□□□□ -0.03
ME3-209ENST00000530520 LST1O00453 97 aa14.86□□□□□ -0.03
ME3-209ENST00000530520 DNAL4O96015 105 aa14.86□□□□□ -0.03
ME3-209ENST00000530520 GAGE2AQ6NT46 116 aa14.86□□□□□ -0.03
ME3-209ENST00000530520 TCL1BO95988 128 aa14.85□□□□□ -0.03
ME3-209ENST00000530520 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.85□□□□□ -0.03
ME3-209ENST00000530520 DEFB105AQ8NG35 78 aa14.85□□□□□ -0.03
ME3-209ENST00000530520 ATXN8Q156A1 80 aa14.84□□□□□ -0.03
ME3-209ENST00000530520 PKHD1L1Q86WI1 4243 aa14.83□□□□□ -0.03
ME3-209ENST00000530520 TRBV20-1A0A075B6N2 111 aa14.82□□□□□ -0.04
ME3-209ENST00000530520 TRACP01848 142 aa14.82□□□□□ -0.04
ME3-209ENST00000530520 KRTAP1-4P0C5Y4 121 aa14.82□□□□□ -0.04
ME3-209ENST00000530520 ANAPC11Q9NYG5 84 aa14.82□□□□□ -0.04
ME3-209ENST00000530520 IGLV5-48A0A075B6I7 105 aa14.8□□□□□ -0.04
ME3-209ENST00000530520 TEX49A0A1B0GTD5 131 aa14.79□□□□□ -0.04
ME3-209ENST00000530520 LINC00483Q53H64 154 aa14.79□□□□□ -0.04
ME3-209ENST00000530520 LINC01547P58512 204 aaPredicted RBP14.78□□□□□ -0.04
ME3-209ENST00000530520 SPCS1Q9Y6A9 102 aa14.78□□□□□ -0.04
ME3-209ENST00000530520 OCIAD2Q56VL3 154 aa14.77□□□□□ -0.04
ME3-209ENST00000530520 FLG2Q5D862 2391 aaPredicted RBP14.76□□□□□ -0.05
ME3-209ENST00000530520 SPRR1BP22528 89 aa14.76□□□□□ -0.05
ME3-209ENST00000530520 Q8N377 158 aa14.76□□□□□ -0.05
ME3-209ENST00000530520 ORMDL1Q9P0S3 153 aa14.76□□□□□ -0.05
ME3-209ENST00000530520 GHRHP01286 108 aa14.74□□□□□ -0.05
ME3-209ENST00000530520 FAM229BQ4G0N7 80 aa14.74□□□□□ -0.05
ME3-209ENST00000530520 CRYGAP11844 174 aa14.72□□□□□ -0.05
ME3-209ENST00000530520 PPDPFLQ8WWR9 84 aa14.72□□□□□ -0.05
ME3-209ENST00000530520 A0A087X002 238 aa14.71□□□□□ -0.05
ME3-209ENST00000530520 H3BMG7 143 aa14.7□□□□□ -0.06
ME3-209ENST00000530520 C3orf22Q8N5N4 141 aa14.7□□□□□ -0.06
ME3-209ENST00000530520 LAMTOR3Q9UHA4 124 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms