RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 C3orf79P0CE67 100 aa0.63□□□□□ -2.31
CAPRIN1-208ENST00000530008 COX7BP24311 80 aa0.63□□□□□ -2.31
CAPRIN1-208ENST00000530008 S100ZQ8WXG8 99 aa0.63□□□□□ -2.31
CAPRIN1-208ENST00000530008 PREX2Q70Z35 1606 aa0.63□□□□□ -2.31
CAPRIN1-208ENST00000530008 TIAM1Q13009 1591 aa0.62□□□□□ -2.31
CAPRIN1-208ENST00000530008 DDX60LQ5H9U9 1706 aaKnown RBP0.62□□□□□ -2.31
CAPRIN1-208ENST00000530008 C2CD3Q4AC94 2353 aa0.62□□□□□ -2.31
CAPRIN1-208ENST00000530008 ALS2Q96Q42 1657 aa0.62□□□□□ -2.31
CAPRIN1-208ENST00000530008 PTPRZ1P23471 2315 aaPredicted RBP0.61□□□□□ -2.31
CAPRIN1-208ENST00000530008 K7EQZ3 153 aa0.61□□□□□ -2.31
CAPRIN1-208ENST00000530008 SFTA3P0C7M3 94 aa0.61□□□□□ -2.31
CAPRIN1-208ENST00000530008 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.61□□□□□ -2.316e-10■■■□□ 17.7
CAPRIN1-208ENST00000530008 PTPRQQ9UMZ3 2332 aa0.61□□□□□ -2.31
CAPRIN1-208ENST00000530008 NWD1Q149M9 1564 aa0.61□□□□□ -2.31
CAPRIN1-208ENST00000530008 NDUFB1O75438 58 aa0.6□□□□□ -2.31
CAPRIN1-208ENST00000530008 COX6B1P14854 86 aa0.6□□□□□ -2.31
CAPRIN1-208ENST00000530008 DEFB109BQ30KR1 87 aa0.6□□□□□ -2.31
CAPRIN1-208ENST00000530008 GNG13Q9P2W3 67 aa0.6□□□□□ -2.31
CAPRIN1-208ENST00000530008 PLXNC1O60486 1568 aa0.6□□□□□ -2.31
CAPRIN1-208ENST00000530008 CELSR2Q9HCU4 2923 aa0.6□□□□□ -2.31
CAPRIN1-208ENST00000530008 CNOT1A5YKK6 2376 aaKnown RBP0.6□□□□□ -2.31
CAPRIN1-208ENST00000530008 TNRC6CQ9HCJ0 1690 aaKnown RBP0.59□□□□□ -2.31
CAPRIN1-208ENST00000530008 USP24Q9UPU5 2620 aa0.59□□□□□ -2.31
CAPRIN1-208ENST00000530008 SPTBN2O15020 2390 aa0.59□□□□□ -2.31
CAPRIN1-208ENST00000530008 ANKRD50Q9ULJ7 1429 aa0.59□□□□□ -2.31
CAPRIN1-208ENST00000530008 CPSF4LA6NMK7 179 aaKnown RBP0.59□□□□□ -2.31
CAPRIN1-208ENST00000530008 SPRR1AP35321 89 aa0.59□□□□□ -2.31
CAPRIN1-208ENST00000530008 ATXN8Q156A1 80 aa0.59□□□□□ -2.31
CAPRIN1-208ENST00000530008 LELP1Q5T871 98 aa0.59□□□□□ -2.31
CAPRIN1-208ENST00000530008 ENHOQ6UWT2 76 aa0.59□□□□□ -2.31
CAPRIN1-208ENST00000530008 LY75O60449 1722 aa0.58□□□□□ -2.32
CAPRIN1-208ENST00000530008 C4AP0C0L4 1744 aa0.58□□□□□ -2.32
CAPRIN1-208ENST00000530008 C4BP0C0L5 1744 aa0.58□□□□□ -2.32
CAPRIN1-208ENST00000530008 NDUFA4O00483 81 aa0.58□□□□□ -2.32
CAPRIN1-208ENST00000530008 RNF17Q9BXT8 1623 aaKnown RBP0.57□□□□□ -2.32
CAPRIN1-208ENST00000530008 SPTY2D1-AS1A0A0U1RR47 76 aa0.57□□□□□ -2.32
CAPRIN1-208ENST00000530008 LINC01549A6NIU2 74 aa0.57□□□□□ -2.32
CAPRIN1-208ENST00000530008 ABCC6O95255 1503 aa0.57□□□□□ -2.32
CAPRIN1-208ENST00000530008 ANKRD36CQ5JPF3 1778 aa0.57□□□□□ -2.32
CAPRIN1-208ENST00000530008 CROCC2H7BZ55 1655 aa0.56□□□□□ -2.32
CAPRIN1-208ENST00000530008 PRXQ9BXM0 1461 aa0.56□□□□□ -2.32
CAPRIN1-208ENST00000530008 BPTFQ12830 3046 aa0.56□□□□□ -2.32
CAPRIN1-208ENST00000530008 MRPL34Q9BQ48 92 aaKnown RBP0.56□□□□□ -2.32
CAPRIN1-208ENST00000530008 C3P01024 1663 aa0.56□□□□□ -2.32
CAPRIN1-208ENST00000530008 ANK2Q01484 3957 aa0.55□□□□□ -2.32
CAPRIN1-208ENST00000530008 K7EMI3 77 aa0.55□□□□□ -2.32
CAPRIN1-208ENST00000530008 UGGT1Q9NYU2 1555 aa0.54□□□□□ -2.32
CAPRIN1-208ENST00000530008 I3L3M4 83 aa0.54□□□□□ -2.32
CAPRIN1-208ENST00000530008 USMG5Q96IX5 58 aa0.54□□□□□ -2.32
CAPRIN1-208ENST00000530008 ABCA10Q8WWZ4 1543 aa0.54□□□□□ -2.32
CAPRIN1-208ENST00000530008 NDUFA3O95167 84 aa0.53□□□□□ -2.32
CAPRIN1-208ENST00000530008 SPRR1BP22528 89 aa0.53□□□□□ -2.32
CAPRIN1-208ENST00000530008 KLK9Q2XQG4 91 aa0.53□□□□□ -2.32
CAPRIN1-208ENST00000530008 APLNQ9ULZ1 77 aa0.53□□□□□ -2.32
CAPRIN1-208ENST00000530008 EEA1Q15075 1411 aa0.53□□□□□ -2.32
CAPRIN1-208ENST00000530008 MAST1Q9Y2H9 1570 aa0.53□□□□□ -2.33
CAPRIN1-208ENST00000530008 MUC5ACP98088 5654 aa0.53□□□□□ -2.33
CAPRIN1-208ENST00000530008 A0A1B0GUL6 1792 aa0.52□□□□□ -2.33
CAPRIN1-208ENST00000530008 KNL1Q8NG31 2342 aa0.52□□□□□ -2.33
CAPRIN1-208ENST00000530008 SPTBN1Q01082 2364 aaKnown RBP0.52□□□□□ -2.33
CAPRIN1-208ENST00000530008 SYNE1Q8NF91 8797 aaKnown RBP0.52□□□□□ -2.33
CAPRIN1-208ENST00000530008 CRIP1P50238 77 aa0.52□□□□□ -2.33
CAPRIN1-208ENST00000530008 H1FX-AS1Q4G0G2 97 aa0.52□□□□□ -2.33
CAPRIN1-208ENST00000530008 KCNQ1DNQ9H478 68 aa0.52□□□□□ -2.33
CAPRIN1-208ENST00000530008 TOGARAM1Q9Y4F4 1720 aa0.52□□□□□ -2.33
CAPRIN1-208ENST00000530008 ALMS1Q8TCU4 4167 aa0.52□□□□□ -2.33
CAPRIN1-208ENST00000530008 NCOR1O75376 2440 aa0.52□□□□□ -2.33
CAPRIN1-208ENST00000530008 CPS1P31327 1500 aa0.51□□□□□ -2.33
CAPRIN1-208ENST00000530008 RPL38P63173 70 aaKnown RBP0.51□□□□□ -2.33
CAPRIN1-208ENST00000530008 SMIM5Q71RC9 77 aa0.51□□□□□ -2.33
CAPRIN1-208ENST00000530008 CLASP1Q7Z460 1538 aa0.51□□□□□ -2.33
CAPRIN1-208ENST00000530008 DEFB105AQ8NG35 78 aa0.51□□□□□ -2.33
CAPRIN1-208ENST00000530008 PRO3102Q9H379 93 aa0.51□□□□□ -2.33
CAPRIN1-208ENST00000530008 PIEZO2Q9H5I5 2752 aa0.51□□□□□ -2.33
CAPRIN1-208ENST00000530008 NAV2Q8IVL1 2488 aa0.5□□□□□ -2.33
CAPRIN1-208ENST00000530008 SYCP2Q9BX26 1530 aa0.5□□□□□ -2.33
CAPRIN1-208ENST00000530008 LOC730098B7Z3J9 87 aa0.5□□□□□ -2.33
CAPRIN1-208ENST00000530008 H0YAA0 97 aa0.5□□□□□ -2.33
CAPRIN1-208ENST00000530008 UBL5Q9BZL1 73 aa0.5□□□□□ -2.33
CAPRIN1-208ENST00000530008 FXYD6Q9H0Q3 95 aa0.5□□□□□ -2.33
CAPRIN1-208ENST00000530008 PCLOQ9Y6V0 5065 aa0.5□□□□□ -2.33
CAPRIN1-208ENST00000530008 BSNQ9UPA5 3926 aa0.5□□□□□ -2.33
CAPRIN1-208ENST00000530008 ZFYVE26Q68DK2 2539 aa0.49□□□□□ -2.33
CAPRIN1-208ENST00000530008 PKDREJQ9NTG1 2253 aa0.49□□□□□ -2.33
CAPRIN1-208ENST00000530008 FCER1GP30273 86 aa0.49□□□□□ -2.33
CAPRIN1-208ENST00000530008 REV3LO60673 3130 aa0.49□□□□□ -2.33
CAPRIN1-208ENST00000530008 SYNE2Q8WXH0 6885 aaKnown RBP0.49□□□□□ -2.33
CAPRIN1-208ENST00000530008 CSMD3Q7Z407 3707 aa0.48□□□□□ -2.33
CAPRIN1-208ENST00000530008 ZNF292O60281 2723 aa0.48□□□□□ -2.33
CAPRIN1-208ENST00000530008 ETDCA0A1B0GVM5 59 aa0.48□□□□□ -2.33
CAPRIN1-208ENST00000530008 M0R1W7 72 aa0.48□□□□□ -2.33
CAPRIN1-208ENST00000530008 WFDC13Q8IUB5 93 aa0.48□□□□□ -2.33
CAPRIN1-208ENST00000530008 CDKN2A-AS1Q9UH64 79 aa0.48□□□□□ -2.33
CAPRIN1-208ENST00000530008 GVINP1Q7Z2Y8 2422 aa0.48□□□□□ -2.33
CAPRIN1-208ENST00000530008 NEBP20929 6669 aa0.48□□□□□ -2.33
CAPRIN1-208ENST00000530008 FAT4Q6V0I7 4981 aa0.48□□□□□ -2.33
CAPRIN1-208ENST00000530008 WNK2Q9Y3S1 2297 aa0.48□□□□□ -2.33
CAPRIN1-208ENST00000530008 COL6A5A8TX70 2615 aa0.48□□□□□ -2.33
CAPRIN1-208ENST00000530008 FANCD2Q9BXW9 1451 aa0.48□□□□□ -2.33
CAPRIN1-208ENST00000530008 IGF2RP11717 2491 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms