RNA–Protein interactions for RNA: ENST00000529813.1

USP47-208, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 3,123 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-208ENST00000529813 C9JAW5 83 aa2.89□□□□□ -1.95
USP47-208ENST00000529813 IGKCP01834 107 aa2.89□□□□□ -1.95
USP47-208ENST00000529813 LCE3BQ5TA77 95 aa2.89□□□□□ -1.95
USP47-208ENST00000529813 TEX49A0A1B0GTD5 131 aa2.89□□□□□ -1.95
USP47-208ENST00000529813 LORP23490 312 aaPredicted RBP2.89□□□□□ -1.95
USP47-208ENST00000529813 PSORS1C2Q9UIG4 136 aa2.89□□□□□ -1.95
USP47-208ENST00000529813 IGKV2-28A0A075B6P5 120 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 MYMXA0A1B0GTQ4 84 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 IGKV2D-28P01615 120 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 CXCL5P42830 114 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 SERTAD4-AS1Q5TG53 156 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 MYCBP2O75592 4640 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 KRTAP4-8A0A0G2JLE6 195 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 NPC2P61916 151 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 PRR3P79522 188 aaKnown RBP2.88□□□□□ -1.95
USP47-208ENST00000529813 CIRBPQ14011 172 aaKnown RBP2.88□□□□□ -1.95
USP47-208ENST00000529813 C9orf129Q5T035 196 aaKnown RBP2.88□□□□□ -1.95
USP47-208ENST00000529813 TMEM126AQ9H061 195 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 C22orf24Q9Y442 160 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 SLC25A20O43772 301 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 SCGB1C2P0DMR2 95 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 C4orf26Q17RF5 130 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 DAND5Q8N907 189 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
USP47-208ENST00000529813 F8WDY8 70 aa2.87□□□□□ -1.95
USP47-208ENST00000529813 DPM2O94777 84 aa2.87□□□□□ -1.95
USP47-208ENST00000529813 LGALS3P17931 250 aaKnown RBP2.87□□□□□ -1.95
USP47-208ENST00000529813 HERVK_113P61574 105 aa2.87□□□□□ -1.95
USP47-208ENST00000529813 C9orf153Q5TBE3 101 aa2.87□□□□□ -1.95
USP47-208ENST00000529813 HRCT1Q6UXD1 115 aa2.87□□□□□ -1.95
USP47-208ENST00000529813 NDUFA12Q9UI09 145 aa2.87□□□□□ -1.95
USP47-208ENST00000529813 FAM236AA0A1B0GUQ0 79 aa2.87□□□□□ -1.95
USP47-208ENST00000529813 FAM236BA0A1B0GV22 79 aa2.87□□□□□ -1.95
USP47-208ENST00000529813 LINC01546A6NGU7 62 aa2.87□□□□□ -1.95
USP47-208ENST00000529813 H7C2G1 150 aa2.87□□□□□ -1.95
USP47-208ENST00000529813 UBE2AP49459 152 aa2.87□□□□□ -1.95
USP47-208ENST00000529813 LINC01561Q8N1V8 128 aa2.87□□□□□ -1.95
USP47-208ENST00000529813 TAL2Q16559 108 aa2.86□□□□□ -1.95
USP47-208ENST00000529813 PLEKHB2Q96CS7 222 aa2.86□□□□□ -1.95
USP47-208ENST00000529813 CYSTM1Q9H1C7 97 aa2.86□□□□□ -1.95
USP47-208ENST00000529813 IGLV5-45A0A087WSX0 123 aa2.86□□□□□ -1.95
USP47-208ENST00000529813 J3KT08 172 aa2.86□□□□□ -1.95
USP47-208ENST00000529813 Q6Q795 121 aa2.86□□□□□ -1.95
USP47-208ENST00000529813 REG3GQ6UW15 175 aa2.86□□□□□ -1.95
USP47-208ENST00000529813 SCGB1D4Q6XE38 83 aa2.86□□□□□ -1.95
USP47-208ENST00000529813 MRPL55Q7Z7F7 128 aaKnown RBP2.86□□□□□ -1.95
USP47-208ENST00000529813 KRTAP11-1Q8IUC1 163 aa2.86□□□□□ -1.95
USP47-208ENST00000529813 TRAV12-1A0A0B4J245 112 aa2.86□□□□□ -1.95
USP47-208ENST00000529813 TMEM223A0PJW6 202 aa2.86□□□□□ -1.95
USP47-208ENST00000529813 NCR3O14931 201 aa2.86□□□□□ -1.95
USP47-208ENST00000529813 MIR7-3HGQ8N6C7 128 aa2.86□□□□□ -1.95
USP47-208ENST00000529813 LINC00167Q96N53 147 aa2.86□□□□□ -1.95
USP47-208ENST00000529813 SND1-IT1Q9HBX3 110 aa2.86□□□□□ -1.95
USP47-208ENST00000529813 VPS13BQ7Z7G8 4022 aa2.85□□□□□ -1.95
USP47-208ENST00000529813 OXTP01178 125 aa2.85□□□□□ -1.95
USP47-208ENST00000529813 TLX1NBP0CAT3 122 aa2.85□□□□□ -1.95
USP47-208ENST00000529813 PLNP26678 52 aa2.85□□□□□ -1.95
USP47-208ENST00000529813 FAM19A3Q7Z5A8 133 aa2.85□□□□□ -1.95
USP47-208ENST00000529813 FAM19A1Q7Z5A9 133 aa2.85□□□□□ -1.95
USP47-208ENST00000529813 HERC1Q15751 4861 aa2.85□□□□□ -1.95
USP47-208ENST00000529813 IGLV5-39A0A0G2JS06 123 aa2.85□□□□□ -1.95
USP47-208ENST00000529813 ZNF815PA8K554 130 aa2.85□□□□□ -1.95
USP47-208ENST00000529813 J3QQQ9 107 aa2.85□□□□□ -1.95
USP47-208ENST00000529813 IGLV7-43P04211 117 aa2.85□□□□□ -1.95
USP47-208ENST00000529813 CFC1BP0CG36 223 aa2.85□□□□□ -1.95
USP47-208ENST00000529813 CFC1P0CG37 223 aa2.85□□□□□ -1.95
USP47-208ENST00000529813 HIGD2AQ9BW72 106 aa2.85□□□□□ -1.95
USP47-208ENST00000529813 DNAH8Q96JB1 4490 aa2.84□□□□□ -1.95
USP47-208ENST00000529813 KRTAP10-4P60372 401 aaPredicted RBP2.84□□□□□ -1.95
USP47-208ENST00000529813 OR13C6PQ8NH95 151 aa2.84□□□□□ -1.95
USP47-208ENST00000529813 DIRC1Q969H9 104 aa2.84□□□□□ -1.95
USP47-208ENST00000529813 DSCR8Q96T75 97 aa2.84□□□□□ -1.95
USP47-208ENST00000529813 LRP1Q07954 4544 aaKnown RBP2.84□□□□□ -1.95
USP47-208ENST00000529813 PRLHP81277 87 aa2.84□□□□□ -1.95
USP47-208ENST00000529813 SPINK6Q6UWN8 80 aa2.84□□□□□ -1.95
USP47-208ENST00000529813 KRTAP7-1Q8IUC3 87 aa2.84□□□□□ -1.95
USP47-208ENST00000529813 C3orf22Q8N5N4 141 aa2.84□□□□□ -1.95
USP47-208ENST00000529813 PRR26Q8N8Z3 221 aa2.84□□□□□ -1.95
USP47-208ENST00000529813 hADV29S1A0JD25 119 aa2.84□□□□□ -1.96
USP47-208ENST00000529813 TSPEAR-AS2P59090 65 aa2.84□□□□□ -1.96
USP47-208ENST00000529813 ANAPC11Q9NYG5 84 aa2.84□□□□□ -1.96
USP47-208ENST00000529813 LEPROTO15243 131 aa2.83□□□□□ -1.96
USP47-208ENST00000529813 KRTAP29-1A8MX34 341 aaPredicted RBP2.83□□□□□ -1.96
USP47-208ENST00000529813 EIF4EBP3O60516 100 aaPredicted RBP2.83□□□□□ -1.96
USP47-208ENST00000529813 RPL28P46779 137 aaKnown RBP2.83□□□□□ -1.96
USP47-208ENST00000529813 S100A7L2Q5SY68 101 aa2.83□□□□□ -1.96
USP47-208ENST00000529813 LYRM7Q5U5X0 104 aa2.83□□□□□ -1.96
USP47-208ENST00000529813 GAGE2AQ6NT46 116 aa2.83□□□□□ -1.96
USP47-208ENST00000529813 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
USP47-208ENST00000529813 UQCRQO14949 82 aa2.82□□□□□ -1.96
USP47-208ENST00000529813 Q5XG85 94 aa2.82□□□□□ -1.96
USP47-208ENST00000529813 PRO1854Q9UHT4 67 aa2.82□□□□□ -1.96
USP47-208ENST00000529813 A0A1B0GX51 115 aa2.82□□□□□ -1.96
USP47-208ENST00000529813 Q1RN00 199 aa2.82□□□□□ -1.96
USP47-208ENST00000529813 PLA2G2DQ9UNK4 145 aa2.82□□□□□ -1.96
USP47-208ENST00000529813 ETDCA0A1B0GVM5 59 aa2.82□□□□□ -1.96
USP47-208ENST00000529813 ZNF861PO60384 105 aa2.82□□□□□ -1.96
USP47-208ENST00000529813 COX17Q14061 63 aa2.82□□□□□ -1.96
USP47-208ENST00000529813 TRBV7-7A0A0K0K1E9 115 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms