RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 KRTAP10-8P60410 259 aa5.49□□□□□ -1.53
CMTM1-210ENST00000528441 E9PLD3 99 aa5.48□□□□□ -1.53
CMTM1-210ENST00000528441 HERV-K104P63124 156 aa5.48□□□□□ -1.53
CMTM1-210ENST00000528441 PRLHP81277 87 aa5.48□□□□□ -1.53
CMTM1-210ENST00000528441 NDUFA12Q9UI09 145 aa5.48□□□□□ -1.53
CMTM1-210ENST00000528441 IGLV5-37A0A075B6J1 123 aa5.47□□□□□ -1.53
CMTM1-210ENST00000528441 NCR3O14931 201 aa5.47□□□□□ -1.53
CMTM1-210ENST00000528441 VPREB1P12018 145 aa5.47□□□□□ -1.53
CMTM1-210ENST00000528441 MIR7-3HGQ8N6C7 128 aa5.47□□□□□ -1.53
CMTM1-210ENST00000528441 PLEKHB2Q96CS7 222 aa5.47□□□□□ -1.53
CMTM1-210ENST00000528441 SNHG12Q9BXW3 62 aa5.47□□□□□ -1.53
CMTM1-210ENST00000528441 TNXBP22105 4242 aa5.46□□□□□ -1.54
CMTM1-210ENST00000528441 TMEM238C9JI98 176 aa5.46□□□□□ -1.54
CMTM1-210ENST00000528441 CRYGAP11844 174 aa5.46□□□□□ -1.54
CMTM1-210ENST00000528441 TAL2Q16559 108 aa5.46□□□□□ -1.54
CMTM1-210ENST00000528441 C2orf91Q6ZV80 131 aa5.46□□□□□ -1.54
CMTM1-210ENST00000528441 TYMSOSQ8TAI1 123 aa5.46□□□□□ -1.54
CMTM1-210ENST00000528441 HIGD2AQ9BW72 106 aa5.46□□□□□ -1.54
CMTM1-210ENST00000528441 M0R378 163 aa5.45□□□□□ -1.54
CMTM1-210ENST00000528441 LEPROTO15243 131 aa5.45□□□□□ -1.54
CMTM1-210ENST00000528441 TSPAN13O95857 204 aa5.45□□□□□ -1.54
CMTM1-210ENST00000528441 PRR4Q16378 134 aa5.45□□□□□ -1.54
CMTM1-210ENST00000528441 TMEM126AQ9H061 195 aa5.45□□□□□ -1.54
CMTM1-210ENST00000528441 HMCN2Q8NDA2 5059 aa5.44□□□□□ -1.54
CMTM1-210ENST00000528441 IGKV2D-26A0A0A0MRZ7 120 aa5.44□□□□□ -1.54
CMTM1-210ENST00000528441 ETDCA0A1B0GVM5 59 aa5.44□□□□□ -1.54
CMTM1-210ENST00000528441 J3QQQ9 107 aa5.44□□□□□ -1.54
CMTM1-210ENST00000528441 COL5A1-AS1Q5SY13 56 aa5.44□□□□□ -1.54
CMTM1-210ENST00000528441 KRTAP1-4P0C5Y4 121 aa5.43□□□□□ -1.54
CMTM1-210ENST00000528441 NPC2P61916 151 aa5.43□□□□□ -1.54
CMTM1-210ENST00000528441 HSD52Q0P140 79 aa5.43□□□□□ -1.54
CMTM1-210ENST00000528441 DAND5Q8N907 189 aa5.43□□□□□ -1.54
CMTM1-210ENST00000528441 ANAPC11Q9NYG5 84 aa5.43□□□□□ -1.54
CMTM1-210ENST00000528441 NMUP48645 174 aa5.42□□□□□ -1.54
CMTM1-210ENST00000528441 S100A7L2Q5SY68 101 aa5.42□□□□□ -1.54
CMTM1-210ENST00000528441 BVES-AS1Q5T3Y7 98 aa5.42□□□□□ -1.54
CMTM1-210ENST00000528441 PCP2Q8IVA1 136 aa5.42□□□□□ -1.54
CMTM1-210ENST00000528441 PRYO14603 147 aa5.41□□□□□ -1.54
CMTM1-210ENST00000528441 TSPEAR-AS2P59090 65 aa5.41□□□□□ -1.54
CMTM1-210ENST00000528441 ZNF706Q9Y5V0 76 aaPredicted RBP5.41□□□□□ -1.54
CMTM1-210ENST00000528441 A0A087X002 238 aa5.4□□□□□ -1.54
CMTM1-210ENST00000528441 Q8NDZ9 215 aa5.4□□□□□ -1.54
CMTM1-210ENST00000528441 CDIP1Q9H305 208 aa5.4□□□□□ -1.54
CMTM1-210ENST00000528441 PPDPFQ9H3Y8 114 aa5.4□□□□□ -1.54
CMTM1-210ENST00000528441 SPANXB1Q9NS25 103 aaPredicted RBP5.4□□□□□ -1.54
CMTM1-210ENST00000528441 TRBV10-3A0A0K0K1G6 114 aa5.39□□□□□ -1.55
CMTM1-210ENST00000528441 Q6ZVH6 145 aa5.39□□□□□ -1.55
CMTM1-210ENST00000528441 A0A1B0GWB2 263 aa5.38□□□□□ -1.55
CMTM1-210ENST00000528441 A6NDN8 102 aa5.38□□□□□ -1.55
CMTM1-210ENST00000528441 HINT1P49773 126 aaPredicted RBP5.38□□□□□ -1.55
CMTM1-210ENST00000528441 LINC00304Q8N9R0 145 aa5.38□□□□□ -1.55
CMTM1-210ENST00000528441 OR13C6PQ8NH95 151 aa5.38□□□□□ -1.55
CMTM1-210ENST00000528441 A0A0J9YXY3 114 aa5.37□□□□□ -1.55
CMTM1-210ENST00000528441 ZNF815PA8K554 130 aa5.37□□□□□ -1.55
CMTM1-210ENST00000528441 TIMM17BO60830 172 aa5.37□□□□□ -1.55
CMTM1-210ENST00000528441 FAM229BQ4G0N7 80 aa5.37□□□□□ -1.55
CMTM1-210ENST00000528441 KRTAP13-1Q8IUC0 172 aa5.37□□□□□ -1.55
CMTM1-210ENST00000528441 CEND1Q8N111 149 aa5.37□□□□□ -1.55
CMTM1-210ENST00000528441 SCGB1D4Q6XE38 83 aa5.36□□□□□ -1.55
CMTM1-210ENST00000528441 SMCR5Q8TEV8 140 aa5.36□□□□□ -1.55
CMTM1-210ENST00000528441 TRAV23DV6A0A075B6W5 121 aa5.35□□□□□ -1.55
CMTM1-210ENST00000528441 TAX1BP3O14907 124 aa5.35□□□□□ -1.55
CMTM1-210ENST00000528441 GAGE2AQ6NT46 116 aa5.35□□□□□ -1.55
CMTM1-210ENST00000528441 LINC00337Q8N6G1 96 aa5.35□□□□□ -1.55
CMTM1-210ENST00000528441 TTTY13Q9BZ97 58 aa5.35□□□□□ -1.55
CMTM1-210ENST00000528441 CBY1Q9Y3M2 126 aa5.35□□□□□ -1.55
CMTM1-210ENST00000528441 UBR4Q5T4S7 5183 aa5.35□□□□□ -1.55
CMTM1-210ENST00000528441 TRBV10-2A0A0K0K1G8 114 aa5.34□□□□□ -1.55
CMTM1-210ENST00000528441 C3orf22Q8N5N4 141 aa5.34□□□□□ -1.55
CMTM1-210ENST00000528441 SPRR4Q96PI1 79 aa5.34□□□□□ -1.55
CMTM1-210ENST00000528441 KRTAP9-3Q9BYQ3 159 aa5.34□□□□□ -1.55
CMTM1-210ENST00000528441 KCNQ1DNQ9H478 68 aa5.34□□□□□ -1.55
CMTM1-210ENST00000528441 IGLV9-49A0A0B4J1Y8 123 aa5.33□□□□□ -1.56
CMTM1-210ENST00000528441 A0A1B0GV90 55 aa5.33□□□□□ -1.56
CMTM1-210ENST00000528441 NDUFC2O95298 119 aa5.33□□□□□ -1.56
CMTM1-210ENST00000528441 IFITM1P13164 125 aa5.33□□□□□ -1.56
CMTM1-210ENST00000528441 KRTAP13-2Q52LG2 175 aa5.33□□□□□ -1.56
CMTM1-210ENST00000528441 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
CMTM1-210ENST00000528441 HIST1H4GQ99525 98 aa5.33□□□□□ -1.56
CMTM1-210ENST00000528441 RETNLBQ9BQ08 111 aa5.33□□□□□ -1.56
CMTM1-210ENST00000528441 C9orf118A6NHY6 69 aa5.32□□□□□ -1.56
CMTM1-210ENST00000528441 BATFQ16520 125 aa5.32□□□□□ -1.56
CMTM1-210ENST00000528441 C9orf153Q5TBE3 101 aa5.32□□□□□ -1.56
CMTM1-210ENST00000528441 LITAFQ99732 161 aa5.32□□□□□ -1.56
CMTM1-210ENST00000528441 SPANXDQ9BXN6 97 aa5.32□□□□□ -1.56
CMTM1-210ENST00000528441 SPANXCQ9NY87 97 aa5.32□□□□□ -1.56
CMTM1-210ENST00000528441 B5MCH6 92 aa5.31□□□□□ -1.56
CMTM1-210ENST00000528441 FXYD2P54710 66 aa5.31□□□□□ -1.56
CMTM1-210ENST00000528441 ADAMTSL4-AS1Q5T5F5 129 aa5.31□□□□□ -1.56
CMTM1-210ENST00000528441 LINC00308Q8TCZ7 52 aa5.31□□□□□ -1.56
CMTM1-210ENST00000528441 COPS9Q8WXC6 57 aa5.31□□□□□ -1.56
CMTM1-210ENST00000528441 LRP2P98164 4655 aa5.31□□□□□ -1.56
CMTM1-210ENST00000528441 ZNF73O43830 326 aaPredicted RBP5.3□□□□□ -1.56
CMTM1-210ENST00000528441 SPRR1AP35321 89 aa5.3□□□□□ -1.56
CMTM1-210ENST00000528441 MOBPQ13875 183 aa5.3□□□□□ -1.56
CMTM1-210ENST00000528441 SPAG11AQ6PDA7 123 aa5.3□□□□□ -1.56
CMTM1-210ENST00000528441 SOSTDC1Q6X4U4 206 aa5.3□□□□□ -1.56
CMTM1-210ENST00000528441 Q8NBF4 154 aa5.3□□□□□ -1.56
CMTM1-210ENST00000528441 LOC107984156A0A0G2JMH3 177 aa5.29□□□□□ -1.56
CMTM1-210ENST00000528441 UBE2V1Q13404 147 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms