RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 HIST1H4GQ99525 98 aa5.78□□□□□ -1.48
CHD7-208ENST00000528280 SND1-IT1Q9HBX3 110 aa5.78□□□□□ -1.48
CHD7-208ENST00000528280 TMEM223A0PJW6 202 aa5.77□□□□□ -1.49
CHD7-208ENST00000528280 LEPROTO15243 131 aa5.77□□□□□ -1.49
CHD7-208ENST00000528280 LINC00158P58513 81 aa5.77□□□□□ -1.49
CHD7-208ENST00000528280 HERV-K104P63124 156 aa5.77□□□□□ -1.49
CHD7-208ENST00000528280 OCIAD2Q56VL3 154 aa5.77□□□□□ -1.49
CHD7-208ENST00000528280 Q6ZVH6 145 aa5.77□□□□□ -1.49
CHD7-208ENST00000528280 H3BUT2 72 aa5.76□□□□□ -1.49
CHD7-208ENST00000528280 KRTAP1-4P0C5Y4 121 aa5.76□□□□□ -1.49
CHD7-208ENST00000528280 SCGB1A1P11684 91 aa5.76□□□□□ -1.49
CHD7-208ENST00000528280 UBE2AP49459 152 aa5.76□□□□□ -1.49
CHD7-208ENST00000528280 LYRM7Q5U5X0 104 aa5.76□□□□□ -1.49
CHD7-208ENST00000528280 SCGB1D4Q6XE38 83 aa5.76□□□□□ -1.49
CHD7-208ENST00000528280 ZNF625Q96I27 306 aaPredicted RBP5.76□□□□□ -1.49
CHD7-208ENST00000528280 TTTY13Q9BZ97 58 aa5.76□□□□□ -1.49
CHD7-208ENST00000528280 J3QQQ9 107 aa5.75□□□□□ -1.49
CHD7-208ENST00000528280 CRYGAP11844 174 aa5.75□□□□□ -1.49
CHD7-208ENST00000528280 LGALS3P17931 250 aaKnown RBP5.75□□□□□ -1.49
CHD7-208ENST00000528280 NHP2Q9NX24 153 aaKnown RBP5.75□□□□□ -1.49
CHD7-208ENST00000528280 SPCS1Q9Y6A9 102 aa5.75□□□□□ -1.49
CHD7-208ENST00000528280 VPREB1P12018 145 aa5.74□□□□□ -1.49
CHD7-208ENST00000528280 IGKV2-28A0A075B6P5 120 aa5.73□□□□□ -1.49
CHD7-208ENST00000528280 TMEM238C9JI98 176 aa5.73□□□□□ -1.49
CHD7-208ENST00000528280 M0R378 163 aa5.73□□□□□ -1.49
CHD7-208ENST00000528280 IGKV2D-28P01615 120 aa5.73□□□□□ -1.49
CHD7-208ENST00000528280 MEIG1Q5JSS6 88 aa5.73□□□□□ -1.49
CHD7-208ENST00000528280 F8W1H4 67 aa5.72□□□□□ -1.49
CHD7-208ENST00000528280 FAM229BQ4G0N7 80 aa5.72□□□□□ -1.49
CHD7-208ENST00000528280 RAB37Q96AX2 223 aa5.72□□□□□ -1.49
CHD7-208ENST00000528280 TMEM126AQ9H061 195 aa5.72□□□□□ -1.49
CHD7-208ENST00000528280 NDUFA12Q9UI09 145 aa5.72□□□□□ -1.49
CHD7-208ENST00000528280 TIMM17BO60830 172 aa5.71□□□□□ -1.5
CHD7-208ENST00000528280 FAM19A1Q7Z5A9 133 aa5.71□□□□□ -1.5
CHD7-208ENST00000528280 KRTAP13-1Q8IUC0 172 aa5.71□□□□□ -1.5
CHD7-208ENST00000528280 TYMSOSQ8TAI1 123 aa5.71□□□□□ -1.5
CHD7-208ENST00000528280 A0A0B4J2C4 111 aa5.7□□□□□ -1.5
CHD7-208ENST00000528280 A0A0J9YXY3 114 aa5.7□□□□□ -1.5
CHD7-208ENST00000528280 TSPEAR-AS2P59090 65 aa5.7□□□□□ -1.5
CHD7-208ENST00000528280 PPDPFQ9H3Y8 114 aa5.7□□□□□ -1.5
CHD7-208ENST00000528280 TRBV20-1A0A075B6N2 111 aa5.69□□□□□ -1.5
CHD7-208ENST00000528280 A0A0U1RRA0 63 aa5.69□□□□□ -1.5
CHD7-208ENST00000528280 K7ERJ3 54 aa5.69□□□□□ -1.5
CHD7-208ENST00000528280 IFITM1P13164 125 aa5.69□□□□□ -1.5
CHD7-208ENST00000528280 MIR7-3HGQ8N6C7 128 aa5.69□□□□□ -1.5
CHD7-208ENST00000528280 COPS9Q8WXC6 57 aa5.69□□□□□ -1.5
CHD7-208ENST00000528280 VPS25Q9BRG1 176 aa5.69□□□□□ -1.5
CHD7-208ENST00000528280 SPANXDQ9BXN6 97 aa5.69□□□□□ -1.5
CHD7-208ENST00000528280 SPANXCQ9NY87 97 aa5.69□□□□□ -1.5
CHD7-208ENST00000528280 LOC107984156A0A0G2JMH3 177 aa5.68□□□□□ -1.5
CHD7-208ENST00000528280 J3QR89 54 aa5.68□□□□□ -1.5
CHD7-208ENST00000528280 ARL17AQ8IVW1 177 aa5.68□□□□□ -1.5
CHD7-208ENST00000528280 PRYO14603 147 aa5.67□□□□□ -1.5
CHD7-208ENST00000528280 LINC00337Q8N6G1 96 aa5.67□□□□□ -1.5
CHD7-208ENST00000528280 KCNQ1DNQ9H478 68 aa5.67□□□□□ -1.5
CHD7-208ENST00000528280 PRO1854Q9UHT4 67 aa5.67□□□□□ -1.5
CHD7-208ENST00000528280 ZNF706Q9Y5V0 76 aaPredicted RBP5.67□□□□□ -1.5
CHD7-208ENST00000528280 A0A087X002 238 aa5.66□□□□□ -1.5
CHD7-208ENST00000528280 TRBV10-2A0A0K0K1G8 114 aa5.66□□□□□ -1.5
CHD7-208ENST00000528280 TSPAN13O95857 204 aa5.66□□□□□ -1.5
CHD7-208ENST00000528280 CFC1BP0CG36 223 aa5.66□□□□□ -1.5
CHD7-208ENST00000528280 CFC1P0CG37 223 aa5.66□□□□□ -1.5
CHD7-208ENST00000528280 PRLHP81277 87 aa5.66□□□□□ -1.5
CHD7-208ENST00000528280 PRR4Q16378 134 aa5.66□□□□□ -1.5
CHD7-208ENST00000528280 NAA38Q9BRA0 125 aaKnown RBP5.66□□□□□ -1.5
CHD7-208ENST00000528280 Q8NDZ9 215 aa5.65□□□□□ -1.5
CHD7-208ENST00000528280 HIGD2AQ9BW72 106 aa5.65□□□□□ -1.5
CHD7-208ENST00000528280 MUC2Q02817 5179 aa5.64□□□□□ -1.51
CHD7-208ENST00000528280 ETDCA0A1B0GVM5 59 aa5.64□□□□□ -1.51
CHD7-208ENST00000528280 A4D1N5 150 aa5.64□□□□□ -1.51
CHD7-208ENST00000528280 NDUFC2O95298 119 aa5.64□□□□□ -1.51
CHD7-208ENST00000528280 SPRR1AP35321 89 aa5.64□□□□□ -1.51
CHD7-208ENST00000528280 C21orf62-AS1Q17RA5 79 aa5.64□□□□□ -1.51
CHD7-208ENST00000528280 SPAG11AQ6PDA7 123 aa5.64□□□□□ -1.51
CHD7-208ENST00000528280 MTURNQ8N3F0 131 aa5.64□□□□□ -1.51
CHD7-208ENST00000528280 LITAFQ99732 161 aa5.64□□□□□ -1.51
CHD7-208ENST00000528280 ANAPC11Q9NYG5 84 aa5.64□□□□□ -1.51
CHD7-208ENST00000528280 LPAP08519 4548 aa5.64□□□□□ -1.51
CHD7-208ENST00000528280 H3BMG7 143 aa5.63□□□□□ -1.51
CHD7-208ENST00000528280 NCR3O14931 201 aa5.63□□□□□ -1.51
CHD7-208ENST00000528280 LCE2AQ5TA79 106 aaPredicted RBP5.63□□□□□ -1.51
CHD7-208ENST00000528280 MUSTN1Q8IVN3 82 aa5.63□□□□□ -1.51
CHD7-208ENST00000528280 LINC00304Q8N9R0 145 aa5.63□□□□□ -1.51
CHD7-208ENST00000528280 PRO0461Q9UI25 63 aa5.63□□□□□ -1.51
CHD7-208ENST00000528280 KRTAP13-2Q52LG2 175 aa5.62□□□□□ -1.51
CHD7-208ENST00000528280 C4orf48Q5BLP8 95 aa5.62□□□□□ -1.51
CHD7-208ENST00000528280 S100A7L2Q5SY68 101 aa5.62□□□□□ -1.51
CHD7-208ENST00000528280 TRBV10-3A0A0K0K1G6 114 aa5.61□□□□□ -1.51
CHD7-208ENST00000528280 SMCR5Q8TEV8 140 aa5.61□□□□□ -1.51
CHD7-208ENST00000528280 SPRR4Q96PI1 79 aa5.61□□□□□ -1.51
CHD7-208ENST00000528280 A0A0U1RQV1 116 aa5.6□□□□□ -1.51
CHD7-208ENST00000528280 KRTAP4-16G5E9R7 235 aaPredicted RBP5.6□□□□□ -1.51
CHD7-208ENST00000528280 COX6CP09669 75 aa5.6□□□□□ -1.51
CHD7-208ENST00000528280 DAND5Q8N907 189 aa5.6□□□□□ -1.51
CHD7-208ENST00000528280 A0A1B0GV72 72 aa5.59□□□□□ -1.51
CHD7-208ENST00000528280 B5MCH6 92 aa5.59□□□□□ -1.51
CHD7-208ENST00000528280 SCGB1C2P0DMR2 95 aa5.59□□□□□ -1.51
CHD7-208ENST00000528280 PSMB2P49721 201 aa5.59□□□□□ -1.51
CHD7-208ENST00000528280 ATXN8Q156A1 80 aa5.59□□□□□ -1.51
CHD7-208ENST00000528280 SIGMAR1Q99720 223 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms