RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 C20orf197Q8N268 126 aa9.96□□□□□ -0.82
USP47-207ENST00000527733 NBEAL2Q6ZNJ1 2754 aa9.95□□□□□ -0.82
USP47-207ENST00000527733 CRYBG3Q68DQ2 2970 aa9.94□□□□□ -0.82
USP47-207ENST00000527733 ZANQ9Y493 2812 aa9.94□□□□□ -0.82
USP47-207ENST00000527733 ASH1LQ9NR48 2969 aaKnown RBP9.93□□□□□ -0.82
USP47-207ENST00000527733 FAM168BA1KXE4 195 aa9.93□□□□□ -0.82
USP47-207ENST00000527733 UQCRQO14949 82 aa9.93□□□□□ -0.82
USP47-207ENST00000527733 SERTAD4-AS1Q5TG53 156 aa9.93□□□□□ -0.82
USP47-207ENST00000527733 SMCPP49901 116 aaPredicted RBP9.93□□□□□ -0.82
USP47-207ENST00000527733 A0A087WTM6 91 aa9.92□□□□□ -0.82
USP47-207ENST00000527733 PRO0461Q9UI25 63 aa9.92□□□□□ -0.82
USP47-207ENST00000527733 EPM2AB3EWF7 344 aa9.92□□□□□ -0.82
USP47-207ENST00000527733 C9orf163Q8N9P6 203 aa9.92□□□□□ -0.82
USP47-207ENST00000527733 LINC00846Q9NV44 126 aa9.92□□□□□ -0.82
USP47-207ENST00000527733 NBEAL1Q6ZS30 2694 aa9.91□□□□□ -0.82
USP47-207ENST00000527733 Q6ZVQ6 151 aa9.9□□□□□ -0.82
USP47-207ENST00000527733 TLX1NBP0CAT3 122 aa9.9□□□□□ -0.82
USP47-207ENST00000527733 BCE1O60756 84 aa9.9□□□□□ -0.83
USP47-207ENST00000527733 Q6Q795 121 aa9.89□□□□□ -0.83
USP47-207ENST00000527733 CASC10Q5T4H9 136 aa9.89□□□□□ -0.83
USP47-207ENST00000527733 KCNQ1DNQ9H478 68 aa9.89□□□□□ -0.83
USP47-207ENST00000527733 SERP2Q8N6R1 65 aa9.89□□□□□ -0.83
USP47-207ENST00000527733 IGLV1-50A0A075B6I6 118 aa9.88□□□□□ -0.83
USP47-207ENST00000527733 CHKB-CPT1BH3BT56 60 aa9.88□□□□□ -0.83
USP47-207ENST00000527733 C3orf22Q8N5N4 141 aa9.88□□□□□ -0.83
USP47-207ENST00000527733 TMEM258P61165 79 aa9.88□□□□□ -0.83
USP47-207ENST00000527733 J3KT08 172 aa9.87□□□□□ -0.83
USP47-207ENST00000527733 C9orf129Q5T035 196 aaKnown RBP9.87□□□□□ -0.83
USP47-207ENST00000527733 ST20-AS1Q8NBB2 130 aa9.86□□□□□ -0.83
USP47-207ENST00000527733 MOBPQ13875 183 aa9.85□□□□□ -0.83
USP47-207ENST00000527733 FAM104AQ969W3 186 aa9.85□□□□□ -0.83
USP47-207ENST00000527733 A0A087WVE0 104 aa9.85□□□□□ -0.83
USP47-207ENST00000527733 DCHS2Q6V1P9 2916 aa9.85□□□□□ -0.83
USP47-207ENST00000527733 HRNRQ86YZ3 2850 aaPredicted RBP9.84□□□□□ -0.83
USP47-207ENST00000527733 CNBPP62633 177 aaKnown RBP9.84□□□□□ -0.83
USP47-207ENST00000527733 IGHV6-1A0A0B4J1U7 121 aa9.83□□□□□ -0.84
USP47-207ENST00000527733 LIMD2Q9BT23 127 aa9.83□□□□□ -0.84
USP47-207ENST00000527733 FAM229AH3BQW9 127 aa9.83□□□□□ -0.84
USP47-207ENST00000527733 DEFB116Q30KQ4 102 aa9.83□□□□□ -0.84
USP47-207ENST00000527733 LINC00528Q8N1L1 170 aa9.83□□□□□ -0.84
USP47-207ENST00000527733 PLA2G2DQ9UNK4 145 aa9.83□□□□□ -0.84
USP47-207ENST00000527733 A0A1B0GW54 56 aa9.82□□□□□ -0.84
USP47-207ENST00000527733 LINC01547P58512 204 aaPredicted RBP9.82□□□□□ -0.84
USP47-207ENST00000527733 LINC00476Q8WZB0 136 aa9.81□□□□□ -0.84
USP47-207ENST00000527733 CRYGAP11844 174 aa9.81□□□□□ -0.84
USP47-207ENST00000527733 Q8NBF4 154 aa9.81□□□□□ -0.84
USP47-207ENST00000527733 COX7CP15954 63 aa9.8□□□□□ -0.84
USP47-207ENST00000527733 CASC2Q6XLA1 102 aa9.79□□□□□ -0.84
USP47-207ENST00000527733 Q6ZQT0 140 aa9.79□□□□□ -0.84
USP47-207ENST00000527733 FAM30AQ9NZY2 134 aa9.79□□□□□ -0.84
USP47-207ENST00000527733 LOC110117498A0A087WWA1 95 aa9.79□□□□□ -0.84
USP47-207ENST00000527733 CDIP1Q9H305 208 aa9.78□□□□□ -0.84
USP47-207ENST00000527733 CXCL6P80162 114 aa9.78□□□□□ -0.84
USP47-207ENST00000527733 TRAV7A0A075B6U4 112 aa9.77□□□□□ -0.85
USP47-207ENST00000527733 SMG1Q96Q15 3661 aaKnown RBP9.77□□□□□ -0.85
USP47-207ENST00000527733 NDUFC1O43677 76 aa9.76□□□□□ -0.85
USP47-207ENST00000527733 LINC00336Q6ZUF6 198 aa9.76□□□□□ -0.85
USP47-207ENST00000527733 SNURFQ9Y675 71 aa9.76□□□□□ -0.85
USP47-207ENST00000527733 CELSR2Q9HCU4 2923 aa9.76□□□□□ -0.85
USP47-207ENST00000527733 A0A1W2PNN7 141 aa9.75□□□□□ -0.85
USP47-207ENST00000527733 NIPBLQ6KC79 2804 aaeCLIP9.73□□□□□ -0.85
USP47-207ENST00000527733 FAM236DA0A1B0GTK5 79 aa9.73□□□□□ -0.85
USP47-207ENST00000527733 FAM236CP0DP71 79 aa9.73□□□□□ -0.85
USP47-207ENST00000527733 KMT2BQ9UMN6 2715 aaPredicted RBP9.72□□□□□ -0.85
USP47-207ENST00000527733 RPL37AP61513 92 aaKnown RBP9.72□□□□□ -0.85
USP47-207ENST00000527733 Q8N9L7 120 aa9.72□□□□□ -0.85
USP47-207ENST00000527733 SPACA4Q8TDM5 124 aa9.72□□□□□ -0.85
USP47-207ENST00000527733 TRBV7-7A0A0K0K1E9 115 aa9.72□□□□□ -0.85
USP47-207ENST00000527733 HCG22E2RYF7 251 aa9.72□□□□□ -0.85
USP47-207ENST00000527733 ZNF861PO60384 105 aa9.72□□□□□ -0.85
USP47-207ENST00000527733 TYMSOSQ8TAI1 123 aa9.72□□□□□ -0.85
USP47-207ENST00000527733 NF1P21359 2839 aa9.71□□□□□ -0.85
USP47-207ENST00000527733 LINC00208Q96KT6 92 aa9.7□□□□□ -0.86
USP47-207ENST00000527733 PLA2G1BP04054 148 aaKnown RBP9.7□□□□□ -0.86
USP47-207ENST00000527733 TNP2Q05952 138 aa9.69□□□□□ -0.86
USP47-207ENST00000527733 TRBV7-4A0A0J9YYF1 115 aa9.69□□□□□ -0.86
USP47-207ENST00000527733 IGLV5-37A0A075B6J1 123 aa9.68□□□□□ -0.86
USP47-207ENST00000527733 CCDC179H3BU77 68 aa9.68□□□□□ -0.86
USP47-207ENST00000527733 Q8N377 158 aa9.66□□□□□ -0.86
USP47-207ENST00000527733 PSORS1C2Q9UIG4 136 aa9.66□□□□□ -0.86
USP47-207ENST00000527733 ATP5EP56381 51 aaPredicted RBP9.65□□□□□ -0.86
USP47-207ENST00000527733 FBN2P35556 2912 aa9.64□□□□□ -0.87
USP47-207ENST00000527733 PRR4Q16378 134 aa9.64□□□□□ -0.87
USP47-207ENST00000527733 C5orf47Q569G3 176 aa9.64□□□□□ -0.87
USP47-207ENST00000527733 IGLV7-43P04211 117 aa9.62□□□□□ -0.87
USP47-207ENST00000527733 SEC61GP60059 68 aa9.62□□□□□ -0.87
USP47-207ENST00000527733 TENM4Q6N022 2769 aa9.62□□□□□ -0.87
USP47-207ENST00000527733 SMR3BP02814 79 aaPredicted RBP9.61□□□□□ -0.87
USP47-207ENST00000527733 SSBP3-AS1Q7Z2R9 100 aa9.61□□□□□ -0.87
USP47-207ENST00000527733 H0Y9P7 68 aa9.6□□□□□ -0.87
USP47-207ENST00000527733 IGFL1Q6UW32 110 aa9.6□□□□□ -0.87
USP47-207ENST00000527733 ERC2-IT1O76042 136 aa9.6□□□□□ -0.87
USP47-207ENST00000527733 KRTAP1-5Q9BYS1 174 aa9.59□□□□□ -0.87
USP47-207ENST00000527733 hDV103S1A0JD37 113 aa9.59□□□□□ -0.87
USP47-207ENST00000527733 SMIM29Q86T20 159 aa9.59□□□□□ -0.87
USP47-207ENST00000527733 RETNLBQ9BQ08 111 aa9.59□□□□□ -0.87
USP47-207ENST00000527733 TMEM254Q8TBM7 123 aa9.58□□□□□ -0.88
USP47-207ENST00000527733 CSMD1Q96PZ7 3565 aa9.58□□□□□ -0.88
USP47-207ENST00000527733 SVEP1Q4LDE5 3571 aa9.57□□□□□ -0.88
USP47-207ENST00000527733 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms