RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 UBE2BP63146 152 aa5.35□□□□□ -1.55
CCDC90B-208ENST00000527025 RPL24P83731 157 aaKnown RBP5.35□□□□□ -1.55
CCDC90B-208ENST00000527025 SPATA45Q537H7 98 aa5.35□□□□□ -1.55
CCDC90B-208ENST00000527025 SCGB1D4Q6XE38 83 aa5.35□□□□□ -1.55
CCDC90B-208ENST00000527025 LINC00308Q8TCZ7 52 aa5.35□□□□□ -1.55
CCDC90B-208ENST00000527025 TMEM238C9JI98 176 aa5.34□□□□□ -1.55
CCDC90B-208ENST00000527025 NDUFC2O95298 119 aa5.34□□□□□ -1.55
CCDC90B-208ENST00000527025 KRTAP1-4P0C5Y4 121 aa5.34□□□□□ -1.55
CCDC90B-208ENST00000527025 NPC2P61916 151 aa5.34□□□□□ -1.55
CCDC90B-208ENST00000527025 LBHQ53QV2 105 aaPredicted RBP5.34□□□□□ -1.55
CCDC90B-208ENST00000527025 NKAPP1Q8N9T2 125 aa5.34□□□□□ -1.55
CCDC90B-208ENST00000527025 PPDPFQ9H3Y8 114 aa5.34□□□□□ -1.55
CCDC90B-208ENST00000527025 IGLV1-50A0A075B6I6 118 aa5.33□□□□□ -1.56
CCDC90B-208ENST00000527025 LOC105371267A0A1B0GV96 52 aa5.33□□□□□ -1.56
CCDC90B-208ENST00000527025 H0Y9J4 135 aa5.33□□□□□ -1.56
CCDC90B-208ENST00000527025 M0R378 163 aa5.33□□□□□ -1.56
CCDC90B-208ENST00000527025 C2orf91Q6ZV80 131 aa5.33□□□□□ -1.56
CCDC90B-208ENST00000527025 C14orf144Q96I85 54 aa5.33□□□□□ -1.56
CCDC90B-208ENST00000527025 SPANXB1Q9NS25 103 aaPredicted RBP5.33□□□□□ -1.56
CCDC90B-208ENST00000527025 IGKV2-28A0A075B6P5 120 aa5.32□□□□□ -1.56
CCDC90B-208ENST00000527025 TRBV10-2A0A0K0K1G8 114 aa5.32□□□□□ -1.56
CCDC90B-208ENST00000527025 NCR3O14931 201 aa5.32□□□□□ -1.56
CCDC90B-208ENST00000527025 IGKV2D-28P01615 120 aa5.32□□□□□ -1.56
CCDC90B-208ENST00000527025 REG3GQ6UW15 175 aa5.32□□□□□ -1.56
CCDC90B-208ENST00000527025 Q6ZVH6 145 aa5.32□□□□□ -1.56
CCDC90B-208ENST00000527025 MIEN1Q9BRT3 115 aa5.32□□□□□ -1.56
CCDC90B-208ENST00000527025 ZNF861PO60384 105 aa5.31□□□□□ -1.56
CCDC90B-208ENST00000527025 IFITM1P13164 125 aa5.31□□□□□ -1.56
CCDC90B-208ENST00000527025 KRTAP13-1Q8IUC0 172 aa5.31□□□□□ -1.56
CCDC90B-208ENST00000527025 PRR26Q8N8Z3 221 aa5.31□□□□□ -1.56
CCDC90B-208ENST00000527025 DIRC1Q969H9 104 aa5.31□□□□□ -1.56
CCDC90B-208ENST00000527025 TRBV10-3A0A0K0K1G6 114 aa5.3□□□□□ -1.56
CCDC90B-208ENST00000527025 BCE1O60756 84 aa5.3□□□□□ -1.56
CCDC90B-208ENST00000527025 IGLV6-57P01721 117 aa5.3□□□□□ -1.56
CCDC90B-208ENST00000527025 SMIM6P0DI80 62 aa5.3□□□□□ -1.56
CCDC90B-208ENST00000527025 SLC25A34Q6PIV7 304 aa5.3□□□□□ -1.56
CCDC90B-208ENST00000527025 MUSTN1Q8IVN3 82 aa5.3□□□□□ -1.56
CCDC90B-208ENST00000527025 HIGD1BQ9P298 99 aa5.3□□□□□ -1.56
CCDC90B-208ENST00000527025 SPRR1AP35321 89 aa5.29□□□□□ -1.56
CCDC90B-208ENST00000527025 LINC00337Q8N6G1 96 aa5.29□□□□□ -1.56
CCDC90B-208ENST00000527025 TMEM126AQ9H061 195 aa5.29□□□□□ -1.56
CCDC90B-208ENST00000527025 UBR4Q5T4S7 5183 aa5.28□□□□□ -1.56
CCDC90B-208ENST00000527025 KRTAP4-16G5E9R7 235 aaPredicted RBP5.28□□□□□ -1.56
CCDC90B-208ENST00000527025 PRYO14603 147 aa5.28□□□□□ -1.56
CCDC90B-208ENST00000527025 KCNQ1DNQ9H478 68 aa5.28□□□□□ -1.56
CCDC90B-208ENST00000527025 DDTP30046 118 aa5.27□□□□□ -1.57
CCDC90B-208ENST00000527025 COPS9Q8WXC6 57 aa5.27□□□□□ -1.57
CCDC90B-208ENST00000527025 ANAPC11Q9NYG5 84 aa5.27□□□□□ -1.57
CCDC90B-208ENST00000527025 LRP2P98164 4655 aa5.27□□□□□ -1.57
CCDC90B-208ENST00000527025 A0A087X002 238 aa5.26□□□□□ -1.57
CCDC90B-208ENST00000527025 A4D1N5 150 aa5.26□□□□□ -1.57
CCDC90B-208ENST00000527025 S100A12P80511 92 aa5.26□□□□□ -1.57
CCDC90B-208ENST00000527025 PRLHP81277 87 aa5.26□□□□□ -1.57
CCDC90B-208ENST00000527025 TRAV23DV6A0A075B6W5 121 aa5.25□□□□□ -1.57
CCDC90B-208ENST00000527025 S100A7L2Q5SY68 101 aa5.25□□□□□ -1.57
CCDC90B-208ENST00000527025 LINC00518Q8N0U6 118 aa5.25□□□□□ -1.57
CCDC90B-208ENST00000527025 HIST1H4GQ99525 98 aa5.25□□□□□ -1.57
CCDC90B-208ENST00000527025 UQCR10Q9UDW1 63 aa5.25□□□□□ -1.57
CCDC90B-208ENST00000527025 RPL28P46779 137 aaKnown RBP5.24□□□□□ -1.57
CCDC90B-208ENST00000527025 TAL2Q16559 108 aa5.24□□□□□ -1.57
CCDC90B-208ENST00000527025 LPAP08519 4548 aa5.24□□□□□ -1.57
CCDC90B-208ENST00000527025 KRTAP13-2Q52LG2 175 aa5.23□□□□□ -1.57
CCDC90B-208ENST00000527025 FAM19A1Q7Z5A9 133 aa5.23□□□□□ -1.57
CCDC90B-208ENST00000527025 OR13C6PQ8NH95 151 aa5.23□□□□□ -1.57
CCDC90B-208ENST00000527025 PRO1933Q9H354 126 aa5.23□□□□□ -1.57
CCDC90B-208ENST00000527025 B5MCH6 92 aa5.22□□□□□ -1.57
CCDC90B-208ENST00000527025 ZNF73O43830 326 aaPredicted RBP5.22□□□□□ -1.57
CCDC90B-208ENST00000527025 UBE2AP49459 152 aa5.22□□□□□ -1.57
CCDC90B-208ENST00000527025 FXYD2P54710 66 aa5.22□□□□□ -1.57
CCDC90B-208ENST00000527025 HSD52Q0P140 79 aa5.22□□□□□ -1.57
CCDC90B-208ENST00000527025 CEND1Q8N111 149 aa5.22□□□□□ -1.57
CCDC90B-208ENST00000527025 C12orf57Q99622 126 aa5.22□□□□□ -1.57
CCDC90B-208ENST00000527025 TRAV13-2A0A0B4J235 113 aa5.21□□□□□ -1.58
CCDC90B-208ENST00000527025 ETDCA0A1B0GVM5 59 aa5.21□□□□□ -1.58
CCDC90B-208ENST00000527025 CFC1BP0CG36 223 aa5.21□□□□□ -1.58
CCDC90B-208ENST00000527025 CFC1P0CG37 223 aa5.21□□□□□ -1.58
CCDC90B-208ENST00000527025 SVIPQ8NHG7 77 aa5.21□□□□□ -1.58
CCDC90B-208ENST00000527025 SMCR5Q8TEV8 140 aa5.21□□□□□ -1.58
CCDC90B-208ENST00000527025 A0A0B4J2C4 111 aa5.2□□□□□ -1.58
CCDC90B-208ENST00000527025 A6NDN8 102 aa5.2□□□□□ -1.58
CCDC90B-208ENST00000527025 C6orf99Q4VX62 202 aa5.2□□□□□ -1.58
CCDC90B-208ENST00000527025 Q6ZRX8 168 aa5.2□□□□□ -1.58
CCDC90B-208ENST00000527025 Q9BRP9 147 aa5.2□□□□□ -1.58
CCDC90B-208ENST00000527025 CBY1Q9Y3M2 126 aa5.2□□□□□ -1.58
CCDC90B-208ENST00000527025 ERC2-IT1O76042 136 aa5.19□□□□□ -1.58
CCDC90B-208ENST00000527025 RPL13AP40429 203 aaKnown RBP5.19□□□□□ -1.58
CCDC90B-208ENST00000527025 ELOF1P60002 83 aaKnown RBP5.19□□□□□ -1.58
CCDC90B-208ENST00000527025 SMIM11BQ8TCY0 68 aa5.19□□□□□ -1.58
CCDC90B-208ENST00000527025 HIGD2AQ9BW72 106 aa5.19□□□□□ -1.58
CCDC90B-208ENST00000527025 A0A1B0GWB2 263 aa5.18□□□□□ -1.58
CCDC90B-208ENST00000527025 TRBV7-6A0A0J9YX20 115 aa5.17□□□□□ -1.58
CCDC90B-208ENST00000527025 CRYGAP11844 174 aa5.17□□□□□ -1.58
CCDC90B-208ENST00000527025 COX7BP24311 80 aa5.17□□□□□ -1.58
CCDC90B-208ENST00000527025 SPRR4Q96PI1 79 aa5.17□□□□□ -1.58
CCDC90B-208ENST00000527025 K7ERJ3 54 aa5.16□□□□□ -1.58
CCDC90B-208ENST00000527025 TSPAN13O95857 204 aa5.16□□□□□ -1.58
CCDC90B-208ENST00000527025 FAM229BQ4G0N7 80 aa5.16□□□□□ -1.58
CCDC90B-208ENST00000527025 BVES-AS1Q5T3Y7 98 aa5.16□□□□□ -1.58
CCDC90B-208ENST00000527025 C3orf22Q8N5N4 141 aa5.16□□□□□ -1.58
CCDC90B-208ENST00000527025 KRTAP3-1Q9BYR8 98 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms