RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 MT-ND4LP03901 98 aa4.06□□□□□ -1.76
CASP4-205ENST00000525116 TRGC2P03986 189 aa4.06□□□□□ -1.76
CASP4-205ENST00000525116 TLX1NBP0CAT3 122 aa4.06□□□□□ -1.76
CASP4-205ENST00000525116 HERVK_113P61574 105 aa4.06□□□□□ -1.76
CASP4-205ENST00000525116 SMDT1Q9H4I9 107 aa4.06□□□□□ -1.76
CASP4-205ENST00000525116 TRBV7-6A0A0J9YX20 115 aa4.05□□□□□ -1.76
CASP4-205ENST00000525116 HIGD1CA8MV81 97 aa4.05□□□□□ -1.76
CASP4-205ENST00000525116 LST1O00453 97 aa4.05□□□□□ -1.76
CASP4-205ENST00000525116 ZNF861PO60384 105 aa4.05□□□□□ -1.76
CASP4-205ENST00000525116 RPL39P62891 51 aaKnown RBP4.05□□□□□ -1.76
CASP4-205ENST00000525116 Q1RN00 199 aa4.05□□□□□ -1.76
CASP4-205ENST00000525116 MEIG1Q5JSS6 88 aa4.05□□□□□ -1.76
CASP4-205ENST00000525116 CLLU1Q5K131 121 aa4.05□□□□□ -1.76
CASP4-205ENST00000525116 C9orf129Q5T035 196 aaKnown RBP4.05□□□□□ -1.76
CASP4-205ENST00000525116 C2orf82Q6UX34 121 aa4.05□□□□□ -1.76
CASP4-205ENST00000525116 RETNLBQ9BQ08 111 aa4.05□□□□□ -1.76
CASP4-205ENST00000525116 A8MUN3 132 aa4.04□□□□□ -1.76
CASP4-205ENST00000525116 RPL23P62829 140 aaKnown RBP4.04□□□□□ -1.76
CASP4-205ENST00000525116 TYMSOSQ8TAI1 123 aa4.04□□□□□ -1.76
CASP4-205ENST00000525116 FAM104AQ969W3 186 aa4.04□□□□□ -1.76
CASP4-205ENST00000525116 TOMM6Q96B49 74 aa4.04□□□□□ -1.76
CASP4-205ENST00000525116 TIMM21Q9BVV7 248 aa4.04□□□□□ -1.76
CASP4-205ENST00000525116 NDUFC2-KCTD14E9PQ53 114 aa4.03□□□□□ -1.76
CASP4-205ENST00000525116 PPP1R17O96001 155 aa4.03□□□□□ -1.76
CASP4-205ENST00000525116 LINC00313P59037 77 aa4.03□□□□□ -1.76
CASP4-205ENST00000525116 HBBP68871 147 aa4.03□□□□□ -1.76
CASP4-205ENST00000525116 ORMDL2Q53FV1 153 aa4.03□□□□□ -1.76
CASP4-205ENST00000525116 MIEN1Q9BRT3 115 aa4.03□□□□□ -1.76
CASP4-205ENST00000525116 ANAPC11Q9NYG5 84 aa4.03□□□□□ -1.76
CASP4-205ENST00000525116 C22orf24Q9Y442 160 aa4.03□□□□□ -1.76
CASP4-205ENST00000525116 TRBV30A0A0K0K1B3 111 aa4.02□□□□□ -1.77
CASP4-205ENST00000525116 CRYGAP11844 174 aa4.02□□□□□ -1.77
CASP4-205ENST00000525116 CKS2P33552 79 aa4.02□□□□□ -1.77
CASP4-205ENST00000525116 CXCL6P80162 114 aa4.02□□□□□ -1.77
CASP4-205ENST00000525116 MRPL51Q4U2R6 128 aaKnown RBP4.02□□□□□ -1.77
CASP4-205ENST00000525116 SLC25A34Q6PIV7 304 aa4.02□□□□□ -1.77
CASP4-205ENST00000525116 PRO1933Q9H354 126 aa4.02□□□□□ -1.77
CASP4-205ENST00000525116 CCDC179H3BU77 68 aa4.01□□□□□ -1.77
CASP4-205ENST00000525116 NUPR1O60356 82 aa4.01□□□□□ -1.77
CASP4-205ENST00000525116 RPL28P46779 137 aaKnown RBP4.01□□□□□ -1.77
CASP4-205ENST00000525116 TMEM258P61165 79 aa4.01□□□□□ -1.77
CASP4-205ENST00000525116 FAM104BQ5XKR9 115 aa4.01□□□□□ -1.77
CASP4-205ENST00000525116 C3orf22Q8N5N4 141 aa4.01□□□□□ -1.77
CASP4-205ENST00000525116 SMIM7Q9BQ49 75 aa4.01□□□□□ -1.77
CASP4-205ENST00000525116 C20orf78Q9BR46 151 aa4.01□□□□□ -1.77
CASP4-205ENST00000525116 NAA38Q9BRA0 125 aaKnown RBP4.01□□□□□ -1.77
CASP4-205ENST00000525116 XAGE1AQ9HD64 81 aa4.01□□□□□ -1.77
CASP4-205ENST00000525116 TOMM7Q9P0U1 55 aa4.01□□□□□ -1.77
CASP4-205ENST00000525116 ZNF706Q9Y5V0 76 aaPredicted RBP4.01□□□□□ -1.77
CASP4-205ENST00000525116 ZNF727A8MUV8 499 aa4□□□□□ -1.77
CASP4-205ENST00000525116 C9JQL5 133 aa4□□□□□ -1.77
CASP4-205ENST00000525116 ZNF73O43830 326 aaPredicted RBP4□□□□□ -1.77
CASP4-205ENST00000525116 BCE1O60756 84 aa4□□□□□ -1.77
CASP4-205ENST00000525116 MRPS36P82909 103 aaKnown RBP4□□□□□ -1.77
CASP4-205ENST00000525116 LCA10Q71F78 164 aa4□□□□□ -1.77
CASP4-205ENST00000525116 SMIM2Q9BVW6 85 aa4□□□□□ -1.77
CASP4-205ENST00000525116 OSTCQ9NRP0 149 aa4□□□□□ -1.77
CASP4-205ENST00000525116 TRBV24-1A0A075B6N3 115 aa3.99□□□□□ -1.77
CASP4-205ENST00000525116 D6R8Y8 96 aa3.99□□□□□ -1.77
CASP4-205ENST00000525116 TAX1BP3O14907 124 aa3.99□□□□□ -1.77
CASP4-205ENST00000525116 SPINK8P0C7L1 97 aa3.99□□□□□ -1.77
CASP4-205ENST00000525116 LGALS3P17931 250 aaKnown RBP3.99□□□□□ -1.77
CASP4-205ENST00000525116 IFI27P40305 119 aaPredicted RBP3.99□□□□□ -1.77
CASP4-205ENST00000525116 KRTAP13-2Q52LG2 175 aa3.99□□□□□ -1.77
CASP4-205ENST00000525116 LINC00304Q8N9R0 145 aa3.99□□□□□ -1.77
CASP4-205ENST00000525116 BRK1Q8WUW1 75 aa3.99□□□□□ -1.77
CASP4-205ENST00000525116 V9GYV3 84 aa3.99□□□□□ -1.77
CASP4-205ENST00000525116 FAM236AA0A1B0GUQ0 79 aa3.98□□□□□ -1.77
CASP4-205ENST00000525116 FAM236BA0A1B0GV22 79 aa3.98□□□□□ -1.77
CASP4-205ENST00000525116 NPYP01303 97 aa3.98□□□□□ -1.77
CASP4-205ENST00000525116 SRP19P09132 144 aaKnown RBP3.98□□□□□ -1.77
CASP4-205ENST00000525116 FABP2P12104 132 aa3.98□□□□□ -1.77
CASP4-205ENST00000525116 DSCR10P59022 87 aa3.98□□□□□ -1.77
CASP4-205ENST00000525116 LINC00167Q96N53 147 aa3.98□□□□□ -1.77
CASP4-205ENST00000525116 TIMM17AQ99595 171 aa3.98□□□□□ -1.77
CASP4-205ENST00000525116 UBE2AP49459 152 aa3.97□□□□□ -1.77
CASP4-205ENST00000525116 TPRXLQ17RH7 258 aa3.97□□□□□ -1.77
CASP4-205ENST00000525116 MRPL54Q6P161 138 aaKnown RBP3.97□□□□□ -1.77
CASP4-205ENST00000525116 ALKAL2Q6UX46 152 aa3.97□□□□□ -1.77
CASP4-205ENST00000525116 TMEM141Q96I45 108 aa3.97□□□□□ -1.77
CASP4-205ENST00000525116 IGLV8-61A0A075B6I0 122 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 IGKV2D-26A0A0A0MRZ7 120 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 SMIM27A0A1W2PRY6 76 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 M0R378 163 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 IFITM1P13164 125 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 HIST1H2BOP23527 126 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 HIST1H2BBP33778 126 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 HIST1H2BDP58876 126 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 HIST1H2BCP62807 126 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 ADIRFQ15847 76 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 HIST2H2BEQ16778 126 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.96□□□□□ -1.78
CASP4-205ENST00000525116 COPS9Q8WXC6 57 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 HIST1H2BHQ93079 126 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 HIST1H2BNQ99877 126 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 HIST1H2BMQ99879 126 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 RPS10P5Q9NQ39 176 aa3.96□□□□□ -1.78
CASP4-205ENST00000525116 A0A1B0GW54 56 aa3.95□□□□□ -1.78
CASP4-205ENST00000525116 H3BMG7 143 aa3.95□□□□□ -1.78
CASP4-205ENST00000525116 FAM229BQ4G0N7 80 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms