RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 PSMB2P49721 201 aa6.86□□□□□ -1.31
TRAPPC4-204ENST00000524797 C6orf226Q5I0X4 101 aa6.86□□□□□ -1.31
TRAPPC4-204ENST00000524797 C1orf137Q5JT78 98 aa6.86□□□□□ -1.31
TRAPPC4-204ENST00000524797 TEN1Q86WV5 123 aa6.86□□□□□ -1.31
TRAPPC4-204ENST00000524797 TNXBP22105 4242 aa6.85□□□□□ -1.31
TRAPPC4-204ENST00000524797 HMCN2Q8NDA2 5059 aa6.85□□□□□ -1.31
TRAPPC4-204ENST00000524797 F8VRH5 84 aa6.85□□□□□ -1.31
TRAPPC4-204ENST00000524797 SMCPP49901 116 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC4-204ENST00000524797 C9orf129Q5T035 196 aaKnown RBP6.85□□□□□ -1.31
TRAPPC4-204ENST00000524797 KRTAP11-1Q8IUC1 163 aa6.85□□□□□ -1.31
TRAPPC4-204ENST00000524797 TRBV20-1A0A075B6N2 111 aa6.84□□□□□ -1.31
TRAPPC4-204ENST00000524797 LOC107984156A0A0G2JMH3 177 aa6.84□□□□□ -1.31
TRAPPC4-204ENST00000524797 TINCRA0A1B0GVN0 87 aa6.84□□□□□ -1.31
TRAPPC4-204ENST00000524797 ARL17AQ8IVW1 177 aa6.84□□□□□ -1.31
TRAPPC4-204ENST00000524797 IGLV5-45A0A087WSX0 123 aa6.84□□□□□ -1.32
TRAPPC4-204ENST00000524797 IFITM1P13164 125 aa6.84□□□□□ -1.32
TRAPPC4-204ENST00000524797 KRTAP10-8P60410 259 aa6.84□□□□□ -1.32
TRAPPC4-204ENST00000524797 SMIM1B2RUZ4 78 aa6.83□□□□□ -1.32
TRAPPC4-204ENST00000524797 PMVKQ15126 192 aa6.83□□□□□ -1.32
TRAPPC4-204ENST00000524797 MEIG1Q5JSS6 88 aa6.83□□□□□ -1.32
TRAPPC4-204ENST00000524797 IGLV7-43P04211 117 aa6.82□□□□□ -1.32
TRAPPC4-204ENST00000524797 CXCL5P42830 114 aa6.82□□□□□ -1.32
TRAPPC4-204ENST00000524797 SCGB1D4Q6XE38 83 aa6.82□□□□□ -1.32
TRAPPC4-204ENST00000524797 COX7B2Q8TF08 81 aa6.82□□□□□ -1.32
TRAPPC4-204ENST00000524797 ZNF815PA8K554 130 aa6.81□□□□□ -1.32
TRAPPC4-204ENST00000524797 LCE2BO14633 110 aa6.81□□□□□ -1.32
TRAPPC4-204ENST00000524797 C9JAW5 83 aa6.8□□□□□ -1.32
TRAPPC4-204ENST00000524797 UBE2BP63146 152 aa6.8□□□□□ -1.32
TRAPPC4-204ENST00000524797 DIRC1Q969H9 104 aa6.8□□□□□ -1.32
TRAPPC4-204ENST00000524797 XAGE1AQ9HD64 81 aa6.8□□□□□ -1.32
TRAPPC4-204ENST00000524797 SNCGO76070 127 aa6.79□□□□□ -1.32
TRAPPC4-204ENST00000524797 TCL1BO95988 128 aa6.78□□□□□ -1.32
TRAPPC4-204ENST00000524797 SCGB1C2P0DMR2 95 aa6.78□□□□□ -1.32
TRAPPC4-204ENST00000524797 HERVK_113P61574 105 aa6.78□□□□□ -1.32
TRAPPC4-204ENST00000524797 ANKRD29Q8N6D5 301 aa6.78□□□□□ -1.32
TRAPPC4-204ENST00000524797 H0Y9J4 135 aa6.78□□□□□ -1.32
TRAPPC4-204ENST00000524797 SPANXDQ9BXN6 97 aa6.78□□□□□ -1.32
TRAPPC4-204ENST00000524797 C22orf24Q9Y442 160 aa6.78□□□□□ -1.32
TRAPPC4-204ENST00000524797 SFTA2Q6UW10 78 aa6.77□□□□□ -1.33
TRAPPC4-204ENST00000524797 ZNF22P17026 224 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC4-204ENST00000524797 IGLV5-39A0A0G2JS06 123 aa6.76□□□□□ -1.33
TRAPPC4-204ENST00000524797 SLC25A20O43772 301 aa6.76□□□□□ -1.33
TRAPPC4-204ENST00000524797 PLEKHB2Q96CS7 222 aa6.76□□□□□ -1.33
TRAPPC4-204ENST00000524797 PRO0628Q9UI54 55 aa6.76□□□□□ -1.33
TRAPPC4-204ENST00000524797 PRO1854Q9UHT4 67 aa6.75□□□□□ -1.33
TRAPPC4-204ENST00000524797 V9GYY9 64 aa6.75□□□□□ -1.33
TRAPPC4-204ENST00000524797 C11orf86A6NJI1 115 aa6.74□□□□□ -1.33
TRAPPC4-204ENST00000524797 CFC1BP0CG36 223 aa6.74□□□□□ -1.33
TRAPPC4-204ENST00000524797 CFC1P0CG37 223 aa6.74□□□□□ -1.33
TRAPPC4-204ENST00000524797 MRPL55Q7Z7F7 128 aaKnown RBP6.74□□□□□ -1.33
TRAPPC4-204ENST00000524797 PRR26Q8N8Z3 221 aa6.74□□□□□ -1.33
TRAPPC4-204ENST00000524797 IGLV5-37A0A075B6J1 123 aa6.73□□□□□ -1.33
TRAPPC4-204ENST00000524797 KRTAP1-4P0C5Y4 121 aa6.72□□□□□ -1.33
TRAPPC4-204ENST00000524797 LINC00167Q96N53 147 aa6.72□□□□□ -1.33
TRAPPC4-204ENST00000524797 ZNF861PO60384 105 aa6.72□□□□□ -1.33
TRAPPC4-204ENST00000524797 IGLV1-50A0A075B6I6 118 aa6.71□□□□□ -1.34
TRAPPC4-204ENST00000524797 ATXN8Q156A1 80 aa6.71□□□□□ -1.34
TRAPPC4-204ENST00000524797 PFN2P35080 140 aa6.7□□□□□ -1.34
TRAPPC4-204ENST00000524797 RPL13AP40429 203 aaKnown RBP6.7□□□□□ -1.34
TRAPPC4-204ENST00000524797 TMEM170BQ5T4T1 132 aa6.7□□□□□ -1.34
TRAPPC4-204ENST00000524797 A0A0B4J2C4 111 aa6.7□□□□□ -1.34
TRAPPC4-204ENST00000524797 RPL37AP8A6NKH3 93 aa6.7□□□□□ -1.34
TRAPPC4-204ENST00000524797 BCE1O60756 84 aa6.7□□□□□ -1.34
TRAPPC4-204ENST00000524797 LGALS3P17931 250 aaKnown RBP6.7□□□□□ -1.34
TRAPPC4-204ENST00000524797 NKAPP1Q8N9T2 125 aa6.7□□□□□ -1.34
TRAPPC4-204ENST00000524797 ZNF625Q96I27 306 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC4-204ENST00000524797 TRBV10-2A0A0K0K1G8 114 aa6.68□□□□□ -1.34
TRAPPC4-204ENST00000524797 TMEM223A0PJW6 202 aa6.68□□□□□ -1.34
TRAPPC4-204ENST00000524797 J3QQQ9 107 aa6.68□□□□□ -1.34
TRAPPC4-204ENST00000524797 RPL28P46779 137 aaKnown RBP6.68□□□□□ -1.34
TRAPPC4-204ENST00000524797 COX17Q14061 63 aa6.68□□□□□ -1.34
TRAPPC4-204ENST00000524797 Q1RN00 199 aa6.68□□□□□ -1.34
TRAPPC4-204ENST00000524797 SND1-IT1Q9HBX3 110 aa6.68□□□□□ -1.34
TRAPPC4-204ENST00000524797 VPREB1P12018 145 aa6.67□□□□□ -1.34
TRAPPC4-204ENST00000524797 C9orf153Q5TBE3 101 aa6.67□□□□□ -1.34
TRAPPC4-204ENST00000524797 C3orf22Q8N5N4 141 aa6.67□□□□□ -1.34
TRAPPC4-204ENST00000524797 UQCRQO14949 82 aa6.66□□□□□ -1.34
TRAPPC4-204ENST00000524797 H7C2G1 150 aa6.66□□□□□ -1.34
TRAPPC4-204ENST00000524797 LEPROTO15243 131 aa6.66□□□□□ -1.34
TRAPPC4-204ENST00000524797 TSPEAR-AS2P59090 65 aa6.66□□□□□ -1.34
TRAPPC4-204ENST00000524797 FAM240AA0A1B0GVK7 77 aa6.65□□□□□ -1.34
TRAPPC4-204ENST00000524797 KRTAP13-1Q8IUC0 172 aa6.65□□□□□ -1.34
TRAPPC4-204ENST00000524797 UBR4Q5T4S7 5183 aa6.65□□□□□ -1.34
TRAPPC4-204ENST00000524797 TEX49A0A1B0GTD5 131 aa6.64□□□□□ -1.35
TRAPPC4-204ENST00000524797 H3BT86 120 aa6.64□□□□□ -1.35
TRAPPC4-204ENST00000524797 Q8NDZ9 215 aa6.64□□□□□ -1.35
TRAPPC4-204ENST00000524797 IGKV2-28A0A075B6P5 120 aa6.64□□□□□ -1.35
TRAPPC4-204ENST00000524797 IGKV2D-28P01615 120 aa6.64□□□□□ -1.35
TRAPPC4-204ENST00000524797 COX6CP09669 75 aa6.64□□□□□ -1.35
TRAPPC4-204ENST00000524797 UBE2AP49459 152 aa6.64□□□□□ -1.35
TRAPPC4-204ENST00000524797 MUSTN1Q8IVN3 82 aa6.64□□□□□ -1.35
TRAPPC4-204ENST00000524797 A0A0U1RRA0 63 aa6.63□□□□□ -1.35
TRAPPC4-204ENST00000524797 LINC00158P58513 81 aa6.63□□□□□ -1.35
TRAPPC4-204ENST00000524797 Q5XG85 94 aa6.63□□□□□ -1.35
TRAPPC4-204ENST00000524797 HRCT1Q6UXD1 115 aa6.63□□□□□ -1.35
TRAPPC4-204ENST00000524797 TRBV7-7A0A0K0K1E9 115 aa6.62□□□□□ -1.35
TRAPPC4-204ENST00000524797 EIF4EBP3O60516 100 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC4-204ENST00000524797 TMEM258P61165 79 aa6.62□□□□□ -1.35
TRAPPC4-204ENST00000524797 IMUPQ9GZP8 106 aa6.62□□□□□ -1.35
TRAPPC4-204ENST00000524797 LRP2P98164 4655 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms