RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 A0A096LPF7 62 aa4.3□□□□□ -1.72
LIN7C-202ENST00000524596 H3BUX3 64 aa4.3□□□□□ -1.72
LIN7C-202ENST00000524596 LINC00304Q8N9R0 145 aa4.29□□□□□ -1.72
LIN7C-202ENST00000524596 TTC28Q96AY4 2481 aa4.29□□□□□ -1.72
LIN7C-202ENST00000524596 COL4A4P53420 1690 aaPredicted RBP4.29□□□□□ -1.72
LIN7C-202ENST00000524596 DEFB103AP81534 67 aa4.29□□□□□ -1.72
LIN7C-202ENST00000524596 Q8N377 158 aa4.28□□□□□ -1.72
LIN7C-202ENST00000524596 PRR34Q9NV39 138 aa4.28□□□□□ -1.72
LIN7C-202ENST00000524596 COL6A3P12111 3177 aa4.27□□□□□ -1.73
LIN7C-202ENST00000524596 Q6ZSN1 163 aa4.27□□□□□ -1.73
LIN7C-202ENST00000524596 COL4A6Q14031 1691 aa4.27□□□□□ -1.73
LIN7C-202ENST00000524596 DEFB109BQ30KR1 87 aa4.26□□□□□ -1.73
LIN7C-202ENST00000524596 MUC6Q6W4X9 2439 aa4.26□□□□□ -1.73
LIN7C-202ENST00000524596 DEFB136Q30KP8 78 aa4.26□□□□□ -1.73
LIN7C-202ENST00000524596 SPINK6Q6UWN8 80 aa4.26□□□□□ -1.73
LIN7C-202ENST00000524596 SZT2Q5T011 3432 aa4.26□□□□□ -1.73
LIN7C-202ENST00000524596 P0C880 135 aa4.26□□□□□ -1.73
LIN7C-202ENST00000524596 SPTBN5Q9NRC6 3674 aaKnown RBP4.26□□□□□ -1.73
LIN7C-202ENST00000524596 IGKV2D-30A0A075B6S6 120 aa4.25□□□□□ -1.73
LIN7C-202ENST00000524596 IGKV2-30P06310 120 aa4.25□□□□□ -1.73
LIN7C-202ENST00000524596 KRTAP11-1Q8IUC1 163 aa4.25□□□□□ -1.73
LIN7C-202ENST00000524596 KRTAP4-16G5E9R7 235 aaPredicted RBP4.25□□□□□ -1.73
LIN7C-202ENST00000524596 GVQW2A0A096LPI5 108 aaPredicted RBP4.24□□□□□ -1.73
LIN7C-202ENST00000524596 C15orf56Q8N910 161 aa4.24□□□□□ -1.73
LIN7C-202ENST00000524596 TYMSOSQ8TAI1 123 aa4.24□□□□□ -1.73
LIN7C-202ENST00000524596 NBDYA0A0U1RRE5 68 aa4.24□□□□□ -1.73
LIN7C-202ENST00000524596 Q96NJ1 140 aa4.24□□□□□ -1.73
LIN7C-202ENST00000524596 CSPG4Q6UVK1 2322 aa4.23□□□□□ -1.73
LIN7C-202ENST00000524596 APLNQ9ULZ1 77 aa4.23□□□□□ -1.73
LIN7C-202ENST00000524596 KMT2BQ9UMN6 2715 aaPredicted RBP4.23□□□□□ -1.73
LIN7C-202ENST00000524596 IGFL1Q6UW32 110 aa4.22□□□□□ -1.73
LIN7C-202ENST00000524596 BDP1A6H8Y1 2624 aa4.22□□□□□ -1.73
LIN7C-202ENST00000524596 RIF1Q5UIP0 2472 aaKnown RBP4.22□□□□□ -1.73
LIN7C-202ENST00000524596 PSORS1C2Q9UIG4 136 aa4.22□□□□□ -1.73
LIN7C-202ENST00000524596 LYNX1G3V0Z9 82 aa4.21□□□□□ -1.74
LIN7C-202ENST00000524596 LYNX1P0DP58 116 aa4.21□□□□□ -1.74
LIN7C-202ENST00000524596 SONP18583 2426 aaKnown RBP4.21□□□□□ -1.74
LIN7C-202ENST00000524596 MUC22E2RYF6 1773 aaPredicted RBP4.2□□□□□ -1.74
LIN7C-202ENST00000524596 MKI67P46013 3256 aaKnown RBP4.2□□□□□ -1.74
LIN7C-202ENST00000524596 PANO1I0J062 215 aa4.2□□□□□ -1.74
LIN7C-202ENST00000524596 KRTAP29-1A8MX34 341 aaPredicted RBP4.19□□□□□ -1.74
LIN7C-202ENST00000524596 FAM168BA1KXE4 195 aa4.19□□□□□ -1.74
LIN7C-202ENST00000524596 RPL37P61927 97 aaKnown RBP4.19□□□□□ -1.74
LIN7C-202ENST00000524596 UNC80Q8N2C7 3258 aa4.18□□□□□ -1.74
LIN7C-202ENST00000524596 RANBP2P49792 3224 aaKnown RBP4.18□□□□□ -1.74
LIN7C-202ENST00000524596 LINC00472Q9H8W2 130 aa4.18□□□□□ -1.74
LIN7C-202ENST00000524596 ZFHX2Q9C0A1 2572 aaPredicted RBP4.18□□□□□ -1.74
LIN7C-202ENST00000524596 MMP24-AS1A0A0U1RRL7 71 aa4.18□□□□□ -1.74
LIN7C-202ENST00000524596 PLAC4Q8WY50 150 aa4.18□□□□□ -1.74
LIN7C-202ENST00000524596 F8P00451 2351 aa4.17□□□□□ -1.74
LIN7C-202ENST00000524596 A0A087WTM6 91 aa4.17□□□□□ -1.74
LIN7C-202ENST00000524596 LELP1Q5T871 98 aa4.17□□□□□ -1.74
LIN7C-202ENST00000524596 SPG11Q96JI7 2443 aa4.16□□□□□ -1.74
LIN7C-202ENST00000524596 A0A0G2JQZ4 141 aa4.16□□□□□ -1.74
LIN7C-202ENST00000524596 COX6B2Q6YFQ2 88 aa4.15□□□□□ -1.75
LIN7C-202ENST00000524596 KRTAP26-1Q6PEX3 210 aa4.14□□□□□ -1.75
LIN7C-202ENST00000524596 A0A0C4DFX4 3053 aa4.13□□□□□ -1.75
LIN7C-202ENST00000524596 R4GN34 69 aa4.13□□□□□ -1.75
LIN7C-202ENST00000524596 BAHCC1Q9P281 2608 aa4.12□□□□□ -1.75
LIN7C-202ENST00000524596 H1FX-AS1Q4G0G2 97 aa4.12□□□□□ -1.75
LIN7C-202ENST00000524596 PKD1L2Q7Z442 2459 aa4.12□□□□□ -1.75
LIN7C-202ENST00000524596 C14orf177Q52M58 125 aa4.12□□□□□ -1.75
LIN7C-202ENST00000524596 SPART-AS1P0CW21 52 aa4.11□□□□□ -1.75
LIN7C-202ENST00000524596 PRUNE2Q8WUY3 3088 aa4.11□□□□□ -1.75
LIN7C-202ENST00000524596 ANAPC11Q9NYG5 84 aa4.1□□□□□ -1.75
LIN7C-202ENST00000524596 BRCA2P51587 3418 aa4.1□□□□□ -1.75
LIN7C-202ENST00000524596 A0A0D9SG42 100 aa4.09□□□□□ -1.75
LIN7C-202ENST00000524596 HIVEP2P31629 2446 aa4.09□□□□□ -1.75
LIN7C-202ENST00000524596 ABCA2Q9BZC7 2435 aa4.09□□□□□ -1.76
LIN7C-202ENST00000524596 LAMA3Q16787 3333 aa4.09□□□□□ -1.76
LIN7C-202ENST00000524596 LAMA2P24043 3122 aaKnown RBP4.07□□□□□ -1.76
LIN7C-202ENST00000524596 COL27A1Q8IZC6 1860 aaPredicted RBP4.07□□□□□ -1.76
LIN7C-202ENST00000524596 FAM208BQ5VWN6 2430 aa4.07□□□□□ -1.76
LIN7C-202ENST00000524596 CENPFP49454 3210 aa4.07□□□□□ -1.76
LIN7C-202ENST00000524596 KLK9Q2XQG4 91 aa4.06□□□□□ -1.76
LIN7C-202ENST00000524596 CHD9Q3L8U1 2897 aa4.05□□□□□ -1.76
LIN7C-202ENST00000524596 PRO2289Q9P1D8 64 aa4.04□□□□□ -1.76
LIN7C-202ENST00000524596 TRANK1O15050 2925 aa4.04□□□□□ -1.76
LIN7C-202ENST00000524596 IGF2RP11717 2491 aa4.04□□□□□ -1.76
LIN7C-202ENST00000524596 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
LIN7C-202ENST00000524596 Q8N1X5 172 aa4.03□□□□□ -1.76
LIN7C-202ENST00000524596 SPTBN4Q9H254 2564 aa4.03□□□□□ -1.76
LIN7C-202ENST00000524596 MUC3AQ02505 3323 aa4.03□□□□□ -1.76
LIN7C-202ENST00000524596 ANKHD1Q8IWZ3 2542 aaKnown RBP4.03□□□□□ -1.77
LIN7C-202ENST00000524596 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
LIN7C-202ENST00000524596 C10orf99Q6UWK7 81 aa4.02□□□□□ -1.77
LIN7C-202ENST00000524596 NAV2Q8IVL1 2488 aa4.02□□□□□ -1.77
LIN7C-202ENST00000524596 ABCA12Q86UK0 2595 aa4.02□□□□□ -1.77
LIN7C-202ENST00000524596 JMJD1CQ15652 2540 aa4.01□□□□□ -1.77
LIN7C-202ENST00000524596 FN1P02751 2386 aaKnown RBP4.01□□□□□ -1.77
LIN7C-202ENST00000524596 USP24Q9UPU5 2620 aa4.01□□□□□ -1.77
LIN7C-202ENST00000524596 VCANP13611 3396 aa4□□□□□ -1.77
LIN7C-202ENST00000524596 EPG5Q9HCE0 2579 aa4□□□□□ -1.77
LIN7C-202ENST00000524596 WWC2-AS2Q96NR7 200 aa3.99□□□□□ -1.77
LIN7C-202ENST00000524596 EYSQ5T1H1 3165 aa3.99□□□□□ -1.77
LIN7C-202ENST00000524596 ACACBO00763 2458 aa3.98□□□□□ -1.77
LIN7C-202ENST00000524596 A0A1W2PPR1 153 aa3.98□□□□□ -1.77
LIN7C-202ENST00000524596 CHD6Q8TD26 2715 aa3.97□□□□□ -1.77
LIN7C-202ENST00000524596 DEFB124Q8NES8 71 aa3.97□□□□□ -1.77
LIN7C-202ENST00000524596 ZNF292O60281 2723 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms