RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 PLNP26678 52 aa3.36□□□□□ -1.87
PABPC1-223ENST00000523636 NPC2P61916 151 aa3.36□□□□□ -1.87
PABPC1-223ENST00000523636 CAMK2N1Q7Z7J9 78 aa3.36□□□□□ -1.87
PABPC1-223ENST00000523636 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
PABPC1-223ENST00000523636 DPH3P1Q9H4G8 78 aa3.36□□□□□ -1.87
PABPC1-223ENST00000523636 PHLDA3Q9Y5J5 127 aa3.36□□□□□ -1.87
PABPC1-223ENST00000523636 IGHV3OR16-8A0A075B7F1 116 aa3.35□□□□□ -1.87
PABPC1-223ENST00000523636 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.35□□□□□ -1.87
PABPC1-223ENST00000523636 TRAV10A0A0B4J240 114 aa3.35□□□□□ -1.87
PABPC1-223ENST00000523636 TRAV12-1A0A0B4J245 112 aa3.35□□□□□ -1.87
PABPC1-223ENST00000523636 IGKV3D-20A0A0C4DH25 116 aa3.35□□□□□ -1.87
PABPC1-223ENST00000523636 IGHV7-4-1A0A0J9YVY3 117 aa3.35□□□□□ -1.87
PABPC1-223ENST00000523636 ATP5EP56381 51 aaPredicted RBP3.35□□□□□ -1.87
PABPC1-223ENST00000523636 TSPEAR-AS2P59090 65 aa3.35□□□□□ -1.87
PABPC1-223ENST00000523636 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
PABPC1-223ENST00000523636 SCGB3A1Q96QR1 104 aa3.35□□□□□ -1.87
PABPC1-223ENST00000523636 RHPN1-AS1Q9BWJ2 59 aa3.35□□□□□ -1.87
PABPC1-223ENST00000523636 A0A096LNJ9 63 aa3.34□□□□□ -1.87
PABPC1-223ENST00000523636 IGHV3-49A0A0A0MS15 119 aa3.34□□□□□ -1.87
PABPC1-223ENST00000523636 SOCS3O14543 225 aa3.34□□□□□ -1.87
PABPC1-223ENST00000523636 HIST1H4AP62805 103 aaKnown RBP3.34□□□□□ -1.87
PABPC1-223ENST00000523636 ZC2HC1BQ5TFG8 222 aa3.34□□□□□ -1.87
PABPC1-223ENST00000523636 ZFAND2AQ8N6M9 145 aa3.34□□□□□ -1.87
PABPC1-223ENST00000523636 C20orf203Q8NBC4 194 aa3.34□□□□□ -1.87
PABPC1-223ENST00000523636 ODF3Q96PU9 254 aa3.34□□□□□ -1.87
PABPC1-223ENST00000523636 TTTY13Q9BZ97 58 aa3.34□□□□□ -1.87
PABPC1-223ENST00000523636 NEBP20929 6669 aa3.33□□□□□ -1.88
PABPC1-223ENST00000523636 IGLV1-50A0A075B6I6 118 aa3.33□□□□□ -1.88
PABPC1-223ENST00000523636 TRAV2A0A0B4J234 112 aa3.33□□□□□ -1.88
PABPC1-223ENST00000523636 F8VRH5 84 aa3.33□□□□□ -1.88
PABPC1-223ENST00000523636 H3BVH4 76 aa3.33□□□□□ -1.88
PABPC1-223ENST00000523636 BCE1O60756 84 aa3.33□□□□□ -1.88
PABPC1-223ENST00000523636 TCL1BO95988 128 aa3.33□□□□□ -1.88
PABPC1-223ENST00000523636 SOSTDC1Q6X4U4 206 aa3.33□□□□□ -1.88
PABPC1-223ENST00000523636 FP248Q71RG6 208 aaPredicted RBP3.33□□□□□ -1.88
PABPC1-223ENST00000523636 ADM2Q7Z4H4 148 aa3.33□□□□□ -1.88
PABPC1-223ENST00000523636 UBE2DNLQ8IWF7 75 aa3.33□□□□□ -1.88
PABPC1-223ENST00000523636 Q8NAQ8 132 aa3.33□□□□□ -1.88
PABPC1-223ENST00000523636 TMEM141Q96I45 108 aa3.33□□□□□ -1.88
PABPC1-223ENST00000523636 DSCR8Q96T75 97 aa3.33□□□□□ -1.88
PABPC1-223ENST00000523636 SMIM2Q9BVW6 85 aa3.33□□□□□ -1.88
PABPC1-223ENST00000523636 HHLA3Q9XRX5 114 aa3.33□□□□□ -1.88
PABPC1-223ENST00000523636 MGPP08493 103 aa3.32□□□□□ -1.88
PABPC1-223ENST00000523636 UBE2AP49459 152 aa3.32□□□□□ -1.88
PABPC1-223ENST00000523636 FXYD7P58549 80 aa3.32□□□□□ -1.88
PABPC1-223ENST00000523636 SS18Q15532 418 aa3.32□□□□□ -1.88
PABPC1-223ENST00000523636 DEFB114Q30KQ6 69 aa3.32□□□□□ -1.88
PABPC1-223ENST00000523636 TMEM170BQ5T4T1 132 aa3.32□□□□□ -1.88
PABPC1-223ENST00000523636 Q6ZRN7 208 aaPredicted RBP3.32□□□□□ -1.88
PABPC1-223ENST00000523636 C5orf38Q86SI9 138 aa3.32□□□□□ -1.88
PABPC1-223ENST00000523636 LINC00643Q86TS7 51 aa3.32□□□□□ -1.88
PABPC1-223ENST00000523636 SERP2Q8N6R1 65 aa3.32□□□□□ -1.88
PABPC1-223ENST00000523636 C14orf178Q8N769 122 aaPredicted RBP3.32□□□□□ -1.88
PABPC1-223ENST00000523636 UPK3BQ9BT76 320 aa3.32□□□□□ -1.88
PABPC1-223ENST00000523636 TRBV25-1A0A075B6N4 114 aa3.31□□□□□ -1.88
PABPC1-223ENST00000523636 DEFB131BA0A096LNP1 70 aa3.31□□□□□ -1.88
PABPC1-223ENST00000523636 MYMXA0A1B0GTQ4 84 aa3.31□□□□□ -1.88
PABPC1-223ENST00000523636 K7ERS5 55 aa3.31□□□□□ -1.88
PABPC1-223ENST00000523636 GNRH2O43555 120 aa3.31□□□□□ -1.88
PABPC1-223ENST00000523636 IGHV3-30-3P0DP02 117 aa3.31□□□□□ -1.88
PABPC1-223ENST00000523636 Q6ZQT7 251 aa3.31□□□□□ -1.88
PABPC1-223ENST00000523636 CHCHD7Q9BUK0 85 aa3.31□□□□□ -1.88
PABPC1-223ENST00000523636 XAGE1AQ9HD64 81 aa3.31□□□□□ -1.88
PABPC1-223ENST00000523636 MRPL35Q9NZE8 188 aaKnown RBP3.31□□□□□ -1.88
PABPC1-223ENST00000523636 IGKV3-7A0A075B6H7 116 aa3.3□□□□□ -1.88
PABPC1-223ENST00000523636 IGLV7-46A0A075B6I9 117 aa3.3□□□□□ -1.88
PABPC1-223ENST00000523636 TRBV6-5A0A0K0K1A5 114 aa3.3□□□□□ -1.88
PABPC1-223ENST00000523636 A0A1B0GVX0 72 aa3.3□□□□□ -1.88
PABPC1-223ENST00000523636 ZFP2Q6ZN57 461 aa3.3□□□□□ -1.88
PABPC1-223ENST00000523636 SDIM1Q6ZPB5 146 aa3.3□□□□□ -1.88
PABPC1-223ENST00000523636 TRAV12-3A0A0B4J271 114 aa3.29□□□□□ -1.88
PABPC1-223ENST00000523636 A0A0J9YX75 114 aa3.29□□□□□ -1.88
PABPC1-223ENST00000523636 A6NED7 52 aa3.29□□□□□ -1.88
PABPC1-223ENST00000523636 I3L3M4 83 aa3.29□□□□□ -1.88
PABPC1-223ENST00000523636 BPY2O14599 106 aa3.29□□□□□ -1.88
PABPC1-223ENST00000523636 NDUFC1O43677 76 aa3.29□□□□□ -1.88
PABPC1-223ENST00000523636 RNASE3P12724 160 aaKnown RBP3.29□□□□□ -1.88
PABPC1-223ENST00000523636 POLR2KP53803 58 aaKnown RBP3.29□□□□□ -1.88
PABPC1-223ENST00000523636 UBE2D3P61077 147 aa3.29□□□□□ -1.88
PABPC1-223ENST00000523636 UBE2D2P62837 147 aa3.29□□□□□ -1.88
PABPC1-223ENST00000523636 CIRBPQ14011 172 aaKnown RBP3.29□□□□□ -1.88
PABPC1-223ENST00000523636 RHOHQ15669 191 aa3.29□□□□□ -1.88
PABPC1-223ENST00000523636 PRR9Q5T870 116 aa3.29□□□□□ -1.88
PABPC1-223ENST00000523636 CIRBP-AS1Q8TBR5 109 aa3.29□□□□□ -1.88
PABPC1-223ENST00000523636 MUC12Q9UKN1 5478 aa3.29□□□□□ -1.88
PABPC1-223ENST00000523636 IGKV2D-26A0A0A0MRZ7 120 aa3.28□□□□□ -1.88
PABPC1-223ENST00000523636 hADV29S1A0JD25 119 aa3.28□□□□□ -1.88
PABPC1-223ENST00000523636 A6NN06 94 aa3.28□□□□□ -1.88
PABPC1-223ENST00000523636 A8MWP4 228 aa3.28□□□□□ -1.88
PABPC1-223ENST00000523636 INSP01308 110 aa3.28□□□□□ -1.88
PABPC1-223ENST00000523636 TLX1NBP0CAT3 122 aa3.28□□□□□ -1.88
PABPC1-223ENST00000523636 DNAH10OSP0CZ25 163 aa3.28□□□□□ -1.88
PABPC1-223ENST00000523636 RPL39LQ96EH5 51 aaKnown RBP3.28□□□□□ -1.88
PABPC1-223ENST00000523636 NHP2Q9NX24 153 aaKnown RBP3.28□□□□□ -1.88
PABPC1-223ENST00000523636 KIF25-AS1Q9Y6Z4 181 aa3.28□□□□□ -1.88
PABPC1-223ENST00000523636 SDHAF1A6NFY7 115 aa3.27□□□□□ -1.89
PABPC1-223ENST00000523636 IGIPA6NJ69 53 aa3.27□□□□□ -1.89
PABPC1-223ENST00000523636 C11orf86A6NJI1 115 aa3.27□□□□□ -1.89
PABPC1-223ENST00000523636 ZNF815PA8K554 130 aa3.27□□□□□ -1.89
PABPC1-223ENST00000523636 SLC25A20O43772 301 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms