RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 IL5P05113 134 aa2.23□□□□□ -2.05
CPNE3-206ENST00000523469 RAB5CP51148 216 aa2.23□□□□□ -2.05
CPNE3-206ENST00000523469 FXYD2P54710 66 aa2.23□□□□□ -2.05
CPNE3-206ENST00000523469 PKIAP61925 76 aa2.23□□□□□ -2.05
CPNE3-206ENST00000523469 RNASE10Q5GAN6 216 aaKnown RBP2.23□□□□□ -2.05
CPNE3-206ENST00000523469 SOSTDC1Q6X4U4 206 aa2.23□□□□□ -2.05
CPNE3-206ENST00000523469 OR2T35Q8NGX2 323 aa2.23□□□□□ -2.05
CPNE3-206ENST00000523469 AGPAT4-IT1Q9H0P7 198 aa2.23□□□□□ -2.05
CPNE3-206ENST00000523469 AP4S1Q9Y587 144 aa2.23□□□□□ -2.05
CPNE3-206ENST00000523469 MUC12Q9UKN1 5478 aa2.22□□□□□ -2.05
CPNE3-206ENST00000523469 IGKV2-40A0A087WW87 121 aaPredicted RBP2.22□□□□□ -2.05
CPNE3-206ENST00000523469 TRBV10-2A0A0K0K1G8 114 aa2.22□□□□□ -2.05
CPNE3-206ENST00000523469 C3orf85A0A1B0GTC6 90 aa2.22□□□□□ -2.05
CPNE3-206ENST00000523469 LOC100130705A0A1B0GUX0 176 aa2.22□□□□□ -2.05
CPNE3-206ENST00000523469 A0A1B0GVG6 124 aa2.22□□□□□ -2.05
CPNE3-206ENST00000523469 H7C2G1 150 aa2.22□□□□□ -2.05
CPNE3-206ENST00000523469 M0R3E3 92 aa2.22□□□□□ -2.05
CPNE3-206ENST00000523469 IGKV2D-40P01614 121 aaPredicted RBP2.22□□□□□ -2.05
CPNE3-206ENST00000523469 NMBP08949 121 aa2.22□□□□□ -2.05
CPNE3-206ENST00000523469 ZNF25P17030 456 aaPredicted RBP2.22□□□□□ -2.05
CPNE3-206ENST00000523469 AQP4P55087 323 aa2.22□□□□□ -2.05
CPNE3-206ENST00000523469 KRTAP26-1Q6PEX3 210 aa2.22□□□□□ -2.05
CPNE3-206ENST00000523469 CYP2G1PQ6ZSU1 146 aa2.22□□□□□ -2.05
CPNE3-206ENST00000523469 LINC00269Q8N2A0 174 aa2.22□□□□□ -2.05
CPNE3-206ENST00000523469 NCR2O95944 276 aa2.21□□□□□ -2.06
CPNE3-206ENST00000523469 METTL15P1P0C7V9 234 aa2.21□□□□□ -2.06
CPNE3-206ENST00000523469 PATE2Q6UY27 113 aa2.21□□□□□ -2.06
CPNE3-206ENST00000523469 TMEM91Q6ZNR0 172 aa2.21□□□□□ -2.06
CPNE3-206ENST00000523469 OR5H6Q8NGV6 325 aa2.21□□□□□ -2.06
CPNE3-206ENST00000523469 PRELID3AQ96N28 172 aa2.21□□□□□ -2.06
CPNE3-206ENST00000523469 CACFD1Q9UGQ2 172 aa2.21□□□□□ -2.06
CPNE3-206ENST00000523469 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
CPNE3-206ENST00000523469 FAM24AA6NFZ4 105 aa2.2□□□□□ -2.06
CPNE3-206ENST00000523469 ZNF727A8MUV8 499 aa2.2□□□□□ -2.06
CPNE3-206ENST00000523469 H3BQ15 152 aa2.2□□□□□ -2.06
CPNE3-206ENST00000523469 TCRAP04437 139 aa2.2□□□□□ -2.06
CPNE3-206ENST00000523469 IAPPP10997 89 aa2.2□□□□□ -2.06
CPNE3-206ENST00000523469 FOXA3P55318 350 aaPredicted RBP2.2□□□□□ -2.06
CPNE3-206ENST00000523469 MRPS10P82664 201 aaKnown RBP2.2□□□□□ -2.06
CPNE3-206ENST00000523469 C9orf116Q5BN46 136 aaPredicted RBP2.2□□□□□ -2.06
CPNE3-206ENST00000523469 C7orf65Q6ZTY9 151 aa2.2□□□□□ -2.06
CPNE3-206ENST00000523469 TSKUQ8WUA8 353 aa2.2□□□□□ -2.06
CPNE3-206ENST00000523469 C14orf144Q96I85 54 aa2.2□□□□□ -2.06
CPNE3-206ENST00000523469 NIT2Q9NQR4 276 aa2.2□□□□□ -2.06
CPNE3-206ENST00000523469 NHP2Q9NX24 153 aaKnown RBP2.2□□□□□ -2.06
CPNE3-206ENST00000523469 TRBV6-8A0A0A6YYG3 113 aa2.19□□□□□ -2.06
CPNE3-206ENST00000523469 A8MWV9 139 aa2.19□□□□□ -2.06
CPNE3-206ENST00000523469 G3V3Q6 166 aa2.19□□□□□ -2.06
CPNE3-206ENST00000523469 UQCRQO14949 82 aa2.19□□□□□ -2.06
CPNE3-206ENST00000523469 TIMM17BO60830 172 aa2.19□□□□□ -2.06
CPNE3-206ENST00000523469 IGLC2P0DOY2 106 aa2.19□□□□□ -2.06
CPNE3-206ENST00000523469 AKR1D1P51857 326 aa2.19□□□□□ -2.06
CPNE3-206ENST00000523469 Q6AWC8 147 aa2.19□□□□□ -2.06
CPNE3-206ENST00000523469 Q6ZQT0 140 aa2.19□□□□□ -2.06
CPNE3-206ENST00000523469 FP248Q71RG6 208 aaPredicted RBP2.19□□□□□ -2.06
CPNE3-206ENST00000523469 UBE2D4Q9Y2X8 147 aa2.19□□□□□ -2.06
CPNE3-206ENST00000523469 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
CPNE3-206ENST00000523469 TRAV1-2A0A0B4J238 106 aa2.18□□□□□ -2.06
CPNE3-206ENST00000523469 S100A10P60903 97 aa2.18□□□□□ -2.06
CPNE3-206ENST00000523469 OCIAD2Q56VL3 154 aa2.18□□□□□ -2.06
CPNE3-206ENST00000523469 FAM74A4Q5TZK3 123 aa2.18□□□□□ -2.06
CPNE3-206ENST00000523469 C10orf113Q5VZT2 155 aa2.18□□□□□ -2.06
CPNE3-206ENST00000523469 COMMD3Q9UBI1 195 aa2.18□□□□□ -2.06
CPNE3-206ENST00000523469 GVQW2A0A096LPI5 108 aaPredicted RBP2.17□□□□□ -2.06
CPNE3-206ENST00000523469 TRAV21A0A0B4J279 112 aa2.17□□□□□ -2.06
CPNE3-206ENST00000523469 IGKV3OR2-268A0A0C4DH90 116 aa2.17□□□□□ -2.06
CPNE3-206ENST00000523469 FAM236AA0A1B0GUQ0 79 aa2.17□□□□□ -2.06
CPNE3-206ENST00000523469 FAM236BA0A1B0GV22 79 aa2.17□□□□□ -2.06
CPNE3-206ENST00000523469 F6UZH7 168 aa2.17□□□□□ -2.06
CPNE3-206ENST00000523469 HBDP02042 147 aa2.17□□□□□ -2.06
CPNE3-206ENST00000523469 KRTAP2-3P0C7H8 128 aa2.17□□□□□ -2.06
CPNE3-206ENST00000523469 UBE2D3P61077 147 aa2.17□□□□□ -2.06
CPNE3-206ENST00000523469 UBE2D2P62837 147 aa2.17□□□□□ -2.06
CPNE3-206ENST00000523469 MRPS36P82909 103 aaKnown RBP2.17□□□□□ -2.06
CPNE3-206ENST00000523469 CHCHD1Q96BP2 118 aaKnown RBP2.17□□□□□ -2.06
CPNE3-206ENST00000523469 LINC00526Q96FQ7 95 aa2.17□□□□□ -2.06
CPNE3-206ENST00000523469 KRTAP2-4Q9BYR9 128 aa2.17□□□□□ -2.06
CPNE3-206ENST00000523469 LSM2Q9Y333 95 aaKnown RBP2.17□□□□□ -2.06
CPNE3-206ENST00000523469 TRBV7-3A0A075B6L6 115 aa2.16□□□□□ -2.06
CPNE3-206ENST00000523469 TRBV25-1A0A075B6N4 114 aa2.16□□□□□ -2.06
CPNE3-206ENST00000523469 C20orf202A1L168 122 aa2.16□□□□□ -2.06
CPNE3-206ENST00000523469 KRTAP12-1P59990 96 aa2.16□□□□□ -2.06
CPNE3-206ENST00000523469 KRTAP13-4Q3LI77 160 aa2.16□□□□□ -2.06
CPNE3-206ENST00000523469 SPANXN5Q5MJ07 72 aa2.16□□□□□ -2.06
CPNE3-206ENST00000523469 TEN1Q86WV5 123 aa2.16□□□□□ -2.06
CPNE3-206ENST00000523469 NAA38Q9BRA0 125 aaKnown RBP2.16□□□□□ -2.06
CPNE3-206ENST00000523469 TMEM191AQ9H0A3 160 aa2.16□□□□□ -2.06
CPNE3-206ENST00000523469 NPVFQ9HCQ7 196 aa2.16□□□□□ -2.06
CPNE3-206ENST00000523469 KMT2DO14686 5537 aa2.16□□□□□ -2.06
CPNE3-206ENST00000523469 IGKV2D-26A0A0A0MRZ7 120 aa2.15□□□□□ -2.07
CPNE3-206ENST00000523469 TRBV10-1A0A0K0K1A3 114 aa2.15□□□□□ -2.07
CPNE3-206ENST00000523469 TRGC1P0CF51 173 aa2.15□□□□□ -2.07
CPNE3-206ENST00000523469 TPT1P13693 172 aaKnown RBP2.15□□□□□ -2.07
CPNE3-206ENST00000523469 PDE6HQ13956 83 aa2.15□□□□□ -2.07
CPNE3-206ENST00000523469 KRTAP19-6Q3LI70 58 aa2.15□□□□□ -2.07
CPNE3-206ENST00000523469 PCOTHQ58A44 107 aa2.15□□□□□ -2.07
CPNE3-206ENST00000523469 CIB3Q96Q77 187 aaPredicted RBP2.15□□□□□ -2.07
CPNE3-206ENST00000523469 NAA60Q9H7X0 242 aa2.15□□□□□ -2.07
CPNE3-206ENST00000523469 NDUFA12Q9UI09 145 aa2.15□□□□□ -2.07
CPNE3-206ENST00000523469 RBAKDNA6NC62 111 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms