RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 CIRBPQ14011 172 aaKnown RBP2.43□□□□□ -2.02
CLK4-207ENST00000520909 SFTA2Q6UW10 78 aa2.43□□□□□ -2.02
CLK4-207ENST00000520909 C15orf56Q8N910 161 aa2.43□□□□□ -2.02
CLK4-207ENST00000520909 CAMK2N2Q96S95 79 aa2.43□□□□□ -2.02
CLK4-207ENST00000520909 DNAH17Q9UFH2 4485 aa2.43□□□□□ -2.02
CLK4-207ENST00000520909 TMEM238C9JI98 176 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 M0R143 59 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 NPC2P61916 151 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 SYCNQ0VAF6 134 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 WFDC2Q14508 124 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 TAL2Q16559 108 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 C9orf116Q5BN46 136 aaPredicted RBP2.42□□□□□ -2.02
CLK4-207ENST00000520909 BVES-AS1Q5T3Y7 98 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 C1orf134Q5TEV5 83 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 Q6ZRU5 148 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 MUSTN1Q8IVN3 82 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 CEND1Q8N111 149 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 DAND5Q8N907 189 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 SPANXB1Q9NS25 103 aaPredicted RBP2.42□□□□□ -2.02
CLK4-207ENST00000520909 ERG28Q9UKR5 140 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 DNAH11Q96DT5 4516 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 TRBV30A0A0K0K1B3 111 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 F8WDY8 70 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 IFITM1P13164 125 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 FXYD2P54710 66 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 Q6ZRN7 208 aaPredicted RBP2.42□□□□□ -2.02
CLK4-207ENST00000520909 MIR7-3HGQ8N6C7 128 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 LINC00308Q8TCZ7 52 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 CARD19Q96LW7 228 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 SPANXDQ9BXN6 97 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 SNHG12Q9BXW3 62 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 SPANXCQ9NY87 97 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 C6orf48Q9UBA6 75 aa2.42□□□□□ -2.02
CLK4-207ENST00000520909 RYR2Q92736 4967 aa2.41□□□□□ -2.02
CLK4-207ENST00000520909 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.41□□□□□ -2.02
CLK4-207ENST00000520909 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.41□□□□□ -2.02
CLK4-207ENST00000520909 LRCOL1A6NCL2 159 aa2.41□□□□□ -2.02
CLK4-207ENST00000520909 A6NDN8 102 aa2.41□□□□□ -2.02
CLK4-207ENST00000520909 COX17Q14061 63 aa2.41□□□□□ -2.02
CLK4-207ENST00000520909 SOSTDC1Q6X4U4 206 aa2.41□□□□□ -2.02
CLK4-207ENST00000520909 COPS9Q8WXC6 57 aa2.41□□□□□ -2.02
CLK4-207ENST00000520909 SND1-IT1Q9HBX3 110 aa2.41□□□□□ -2.02
CLK4-207ENST00000520909 NHP2Q9NX24 153 aaKnown RBP2.41□□□□□ -2.02
CLK4-207ENST00000520909 A0A087WTM6 91 aa2.4□□□□□ -2.03
CLK4-207ENST00000520909 LCE6AA0A183 80 aa2.4□□□□□ -2.03
CLK4-207ENST00000520909 NDUFC2-KCTD14E9PQ53 114 aa2.4□□□□□ -2.03
CLK4-207ENST00000520909 K7ERJ3 54 aa2.4□□□□□ -2.03
CLK4-207ENST00000520909 CNBPP62633 177 aaKnown RBP2.4□□□□□ -2.03
CLK4-207ENST00000520909 RPL18AQ02543 176 aaKnown RBP2.4□□□□□ -2.03
CLK4-207ENST00000520909 COL5A1-AS1Q5SY13 56 aa2.4□□□□□ -2.03
CLK4-207ENST00000520909 Q8N814 137 aa2.4□□□□□ -2.03
CLK4-207ENST00000520909 RAB37Q96AX2 223 aa2.4□□□□□ -2.03
CLK4-207ENST00000520909 XAGE1AQ9HD64 81 aa2.4□□□□□ -2.03
CLK4-207ENST00000520909 FAT2Q9NYQ8 4349 aa2.39□□□□□ -2.03
CLK4-207ENST00000520909 LOC107984640A0A0U1RRK4 108 aa2.39□□□□□ -2.03
CLK4-207ENST00000520909 H7C2G1 150 aa2.39□□□□□ -2.03
CLK4-207ENST00000520909 FUSP35637 526 aaKnown RBP eCLIP2.39□□□□□ -2.03
CLK4-207ENST00000520909 PRR3P79522 188 aaKnown RBP2.39□□□□□ -2.03
CLK4-207ENST00000520909 DNAH5Q8TE73 4624 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 KMT2CQ8NEZ4 4911 aaKnown RBP2.38□□□□□ -2.03
CLK4-207ENST00000520909 DNAH8Q96JB1 4490 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 A0A0B4J2C4 111 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 LOC107984156A0A0G2JMH3 177 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 A0A1B0GWB2 263 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 PANO1I0J062 215 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 TAX1BP3O14907 124 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 NCR3O14931 201 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 TLX1NBP0CAT3 122 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 RPL13AP40429 203 aaKnown RBP2.38□□□□□ -2.03
CLK4-207ENST00000520909 LINC01620Q4KN68 170 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 ARL17AQ8IVW1 177 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 C9orf163Q8N9P6 203 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 Q8NDZ9 215 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 OR13C6PQ8NH95 151 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 NAA38Q9BRA0 125 aaKnown RBP2.38□□□□□ -2.03
CLK4-207ENST00000520909 PPDPFQ9H3Y8 114 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 PRO1854Q9UHT4 67 aa2.38□□□□□ -2.03
CLK4-207ENST00000520909 IGKV2-28A0A075B6P5 120 aa2.37□□□□□ -2.03
CLK4-207ENST00000520909 A0A096LNI7 61 aa2.37□□□□□ -2.03
CLK4-207ENST00000520909 TRAV13-2A0A0B4J235 113 aa2.37□□□□□ -2.03
CLK4-207ENST00000520909 IGKV2-24A0A0C4DH68 120 aa2.37□□□□□ -2.03
CLK4-207ENST00000520909 H3BUT2 72 aa2.37□□□□□ -2.03
CLK4-207ENST00000520909 NDUFC2O95298 119 aa2.37□□□□□ -2.03
CLK4-207ENST00000520909 IGKV2D-28P01615 120 aa2.37□□□□□ -2.03
CLK4-207ENST00000520909 PSMB2P49721 201 aa2.37□□□□□ -2.03
CLK4-207ENST00000520909 CXCL6P80162 114 aa2.37□□□□□ -2.03
CLK4-207ENST00000520909 S100A7L2Q5SY68 101 aa2.37□□□□□ -2.03
CLK4-207ENST00000520909 SDIM1Q6ZPB5 146 aa2.37□□□□□ -2.03
CLK4-207ENST00000520909 NKAPP1Q8N9T2 125 aa2.37□□□□□ -2.03
CLK4-207ENST00000520909 DPH3Q96FX2 82 aa2.37□□□□□ -2.03
CLK4-207ENST00000520909 PKIGQ9Y2B9 76 aa2.37□□□□□ -2.03
CLK4-207ENST00000520909 PKD1P98161 4303 aa2.36□□□□□ -2.03
CLK4-207ENST00000520909 DYNC1H1Q14204 4646 aaKnown RBP2.36□□□□□ -2.03
CLK4-207ENST00000520909 TRBV10-2A0A0K0K1G8 114 aa2.36□□□□□ -2.03
CLK4-207ENST00000520909 C16orf90A8MZG2 172 aa2.36□□□□□ -2.03
CLK4-207ENST00000520909 M0R378 163 aa2.36□□□□□ -2.03
CLK4-207ENST00000520909 TSPAN13O95857 204 aa2.36□□□□□ -2.03
CLK4-207ENST00000520909 CHTF8P0CG12 524 aa2.36□□□□□ -2.03
CLK4-207ENST00000520909 SCGB1C2P0DMR2 95 aa2.36□□□□□ -2.03
CLK4-207ENST00000520909 VAMP3Q15836 100 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms