RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 OCR1Q9BZK8 76 aa4.53□□□□□ -1.68
CTNNA1-225ENST00000520865 ESM1Q9NQ30 184 aa4.53□□□□□ -1.68
CTNNA1-225ENST00000520865 MALRD1Q5VYJ5 2156 aa4.53□□□□□ -1.68
CTNNA1-225ENST00000520865 IGHV3-66A0A0C4DH42 116 aa4.52□□□□□ -1.69
CTNNA1-225ENST00000520865 TRBV10-1A0A0K0K1A3 114 aa4.52□□□□□ -1.69
CTNNA1-225ENST00000520865 M0R378 163 aa4.52□□□□□ -1.69
CTNNA1-225ENST00000520865 ELOF1P60002 83 aaKnown RBP4.52□□□□□ -1.69
CTNNA1-225ENST00000520865 TRBV6-8A0A0A6YYG3 113 aa4.51□□□□□ -1.69
CTNNA1-225ENST00000520865 LINC00158P58513 81 aa4.51□□□□□ -1.69
CTNNA1-225ENST00000520865 COX6A2Q02221 97 aa4.51□□□□□ -1.69
CTNNA1-225ENST00000520865 C11orf45Q8TAV5 145 aa4.51□□□□□ -1.69
CTNNA1-225ENST00000520865 ARFGEF3Q5TH69 2177 aa4.5□□□□□ -1.69
CTNNA1-225ENST00000520865 TRAV22A0A0B4J277 110 aa4.5□□□□□ -1.69
CTNNA1-225ENST00000520865 K7EQG2 157 aa4.5□□□□□ -1.69
CTNNA1-225ENST00000520865 COX17Q14061 63 aa4.5□□□□□ -1.69
CTNNA1-225ENST00000520865 LINC00575Q6W349 94 aa4.5□□□□□ -1.69
CTNNA1-225ENST00000520865 CDC42SE2Q9NRR3 84 aa4.5□□□□□ -1.69
CTNNA1-225ENST00000520865 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.49□□□□□ -1.69
CTNNA1-225ENST00000520865 IGHV3OR16-8A0A075B7F1 116 aa4.49□□□□□ -1.69
CTNNA1-225ENST00000520865 B4DSR2 109 aa4.49□□□□□ -1.69
CTNNA1-225ENST00000520865 APOC4P55056 127 aa4.49□□□□□ -1.69
CTNNA1-225ENST00000520865 SYCNQ0VAF6 134 aa4.49□□□□□ -1.69
CTNNA1-225ENST00000520865 LCA10Q71F78 164 aa4.49□□□□□ -1.69
CTNNA1-225ENST00000520865 IGHV3OR16-13A0A075B7E8 117 aa4.48□□□□□ -1.69
CTNNA1-225ENST00000520865 IGHV3-74A0A0B4J1X5 117 aa4.48□□□□□ -1.69
CTNNA1-225ENST00000520865 MSMBP08118 114 aa4.48□□□□□ -1.69
CTNNA1-225ENST00000520865 RNASE13Q5GAN3 156 aaKnown RBP4.48□□□□□ -1.69
CTNNA1-225ENST00000520865 C7orf65Q6ZTY9 151 aa4.48□□□□□ -1.69
CTNNA1-225ENST00000520865 LINC00269Q8N2A0 174 aa4.48□□□□□ -1.69
CTNNA1-225ENST00000520865 DIRC1Q969H9 104 aa4.48□□□□□ -1.69
CTNNA1-225ENST00000520865 UBE2E2Q96LR5 201 aa4.48□□□□□ -1.69
CTNNA1-225ENST00000520865 RHPN1-AS1Q9BWJ2 59 aa4.48□□□□□ -1.69
CTNNA1-225ENST00000520865 MUC4Q99102 2169 aa4.48□□□□□ -1.69
CTNNA1-225ENST00000520865 IGHV3-49A0A0A0MS15 119 aa4.47□□□□□ -1.69
CTNNA1-225ENST00000520865 LOC100131303A0A0U1RQF7 123 aa4.47□□□□□ -1.69
CTNNA1-225ENST00000520865 A8MTW9 85 aa4.47□□□□□ -1.69
CTNNA1-225ENST00000520865 PSCAO43653 123 aa4.47□□□□□ -1.69
CTNNA1-225ENST00000520865 ZNF73O43830 326 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-225ENST00000520865 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-225ENST00000520865 Q6ZTI0 123 aa4.47□□□□□ -1.69
CTNNA1-225ENST00000520865 C1orf64Q8NEQ6 169 aa4.47□□□□□ -1.69
CTNNA1-225ENST00000520865 DEFB104AQ8WTQ1 72 aa4.47□□□□□ -1.69
CTNNA1-225ENST00000520865 MGAM2Q2M2H8 2515 aa4.47□□□□□ -1.69
CTNNA1-225ENST00000520865 COX7BP24311 80 aa4.46□□□□□ -1.7
CTNNA1-225ENST00000520865 LMO4P61968 165 aa4.46□□□□□ -1.7
CTNNA1-225ENST00000520865 ASB16-AS1Q495Z4 193 aa4.46□□□□□ -1.7
CTNNA1-225ENST00000520865 ZCCHC13Q8WW36 166 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-225ENST00000520865 TENM1Q9UKZ4 2725 aa4.46□□□□□ -1.7
CTNNA1-225ENST00000520865 Q8IZM0 81 aa4.45□□□□□ -1.7
CTNNA1-225ENST00000520865 SPANXA2-OT1Q8N9U9 137 aa4.45□□□□□ -1.7
CTNNA1-225ENST00000520865 Q9BRP9 147 aa4.45□□□□□ -1.7
CTNNA1-225ENST00000520865 MEGF8Q7Z7M0 2845 aa4.45□□□□□ -1.7
CTNNA1-225ENST00000520865 IGHV3OR16-9A0A0B4J2B5 98 aa4.44□□□□□ -1.7
CTNNA1-225ENST00000520865 A6NN06 94 aa4.44□□□□□ -1.7
CTNNA1-225ENST00000520865 H3BPC8 53 aa4.44□□□□□ -1.7
CTNNA1-225ENST00000520865 Q5VV11 94 aa4.44□□□□□ -1.7
CTNNA1-225ENST00000520865 C5orf56Q8N8D9 126 aa4.44□□□□□ -1.7
CTNNA1-225ENST00000520865 PLXNB1O43157 2135 aa4.43□□□□□ -1.7
CTNNA1-225ENST00000520865 LOC101927531A0A1B0GV80 90 aa4.43□□□□□ -1.7
CTNNA1-225ENST00000520865 IGKV4-1P06312 121 aa4.43□□□□□ -1.7
CTNNA1-225ENST00000520865 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
CTNNA1-225ENST00000520865 C8orf87E5RJ46 101 aa4.42□□□□□ -1.7
CTNNA1-225ENST00000520865 G3V318 75 aa4.42□□□□□ -1.7
CTNNA1-225ENST00000520865 PSPHP1O15172 72 aa4.42□□□□□ -1.7
CTNNA1-225ENST00000520865 HIGD2AQ9BW72 106 aa4.42□□□□□ -1.7
CTNNA1-225ENST00000520865 ARHGAP32A7KAX9 2087 aa4.41□□□□□ -1.7
CTNNA1-225ENST00000520865 ETDCA0A1B0GVM5 59 aa4.41□□□□□ -1.7
CTNNA1-225ENST00000520865 C16orf90A8MZG2 172 aa4.41□□□□□ -1.7
CTNNA1-225ENST00000520865 HCG22E2RYF7 251 aa4.41□□□□□ -1.7
CTNNA1-225ENST00000520865 CHKB-CPT1BH3BT56 60 aa4.41□□□□□ -1.7
CTNNA1-225ENST00000520865 SPINK13Q1W4C9 94 aa4.41□□□□□ -1.7
CTNNA1-225ENST00000520865 C6orf99Q4VX62 202 aa4.41□□□□□ -1.7
CTNNA1-225ENST00000520865 NKAPP1Q8N9T2 125 aa4.41□□□□□ -1.7
CTNNA1-225ENST00000520865 A8MUN3 132 aa4.4□□□□□ -1.71
CTNNA1-225ENST00000520865 IGHV3-11P01762 117 aa4.4□□□□□ -1.71
CTNNA1-225ENST00000520865 DEFB1P60022 68 aa4.4□□□□□ -1.71
CTNNA1-225ENST00000520865 TOMM7Q9P0U1 55 aa4.4□□□□□ -1.71
CTNNA1-225ENST00000520865 CELA1Q9UNI1 258 aa4.4□□□□□ -1.71
CTNNA1-225ENST00000520865 WNK2Q9Y3S1 2297 aa4.39□□□□□ -1.71
CTNNA1-225ENST00000520865 TRGV2A0A075B6R0 118 aa4.39□□□□□ -1.71
CTNNA1-225ENST00000520865 HIGD2BQ4VC39 106 aa4.39□□□□□ -1.71
CTNNA1-225ENST00000520865 B9D2Q9BPU9 175 aa4.39□□□□□ -1.71
CTNNA1-225ENST00000520865 TRRAPQ9Y4A5 3859 aa4.39□□□□□ -1.71
CTNNA1-225ENST00000520865 TGP01266 2768 aa4.39□□□□□ -1.71
CTNNA1-225ENST00000520865 IGHV3-73A0A0B4J1V6 119 aa4.38□□□□□ -1.71
CTNNA1-225ENST00000520865 KIAA0087Q14695 138 aa4.38□□□□□ -1.71
CTNNA1-225ENST00000520865 BRD3OSQ6XYD6 125 aa4.38□□□□□ -1.71
CTNNA1-225ENST00000520865 PKD1L1Q8TDX9 2849 aa4.38□□□□□ -1.71
CTNNA1-225ENST00000520865 IGLV6-57P01721 117 aa4.37□□□□□ -1.71
CTNNA1-225ENST00000520865 MP68P56378 58 aa4.37□□□□□ -1.71
CTNNA1-225ENST00000520865 DEFB112Q30KQ8 113 aa4.37□□□□□ -1.71
CTNNA1-225ENST00000520865 Q6ZQY7 126 aa4.37□□□□□ -1.71
CTNNA1-225ENST00000520865 LINC00208Q96KT6 92 aa4.37□□□□□ -1.71
CTNNA1-225ENST00000520865 A6NED7 52 aa4.36□□□□□ -1.71
CTNNA1-225ENST00000520865 INSP01308 110 aa4.36□□□□□ -1.71
CTNNA1-225ENST00000520865 C9orf116Q5BN46 136 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-225ENST00000520865 KCNQ1DNQ9H478 68 aa4.36□□□□□ -1.71
CTNNA1-225ENST00000520865 IGKV3-7A0A075B6H7 116 aa4.35□□□□□ -1.71
CTNNA1-225ENST00000520865 M0R2N4 97 aa4.35□□□□□ -1.71
CTNNA1-225ENST00000520865 LY6EQ16553 131 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms