RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CCL18P55774 89 aa1.81□□□□□ -2.12
HMGB1P41-201ENST00000520234 DEFB131AP59861 70 aa1.81□□□□□ -2.12
HMGB1P41-201ENST00000520234 ESRGQ1W209 222 aa1.81□□□□□ -2.12
HMGB1P41-201ENST00000520234 FAM74A4Q5TZK3 123 aa1.81□□□□□ -2.12
HMGB1P41-201ENST00000520234 Q6ZQT0 140 aa1.81□□□□□ -2.12
HMGB1P41-201ENST00000520234 DEFB104AQ8WTQ1 72 aa1.81□□□□□ -2.12
HMGB1P41-201ENST00000520234 CAMK2N2Q96S95 79 aa1.81□□□□□ -2.12
HMGB1P41-201ENST00000520234 CDC42SE2Q9NRR3 84 aa1.81□□□□□ -2.12
HMGB1P41-201ENST00000520234 LINC00588Q9Y4M8 146 aa1.81□□□□□ -2.12
HMGB1P41-201ENST00000520234 SNURFQ9Y675 71 aa1.81□□□□□ -2.12
HMGB1P41-201ENST00000520234 CR1P17927 2039 aa1.81□□□□□ -2.12
HMGB1P41-201ENST00000520234 WNK1Q9H4A3 2382 aa1.8□□□□□ -2.12
HMGB1P41-201ENST00000520234 TRBV6-4A0A1B0GX49 114 aa1.8□□□□□ -2.12
HMGB1P41-201ENST00000520234 JMJD7-PLA2G4BH0Y9G9 81 aa1.8□□□□□ -2.12
HMGB1P41-201ENST00000520234 M0R2N4 97 aa1.8□□□□□ -2.12
HMGB1P41-201ENST00000520234 DEFB113Q30KQ7 82 aa1.8□□□□□ -2.12
HMGB1P41-201ENST00000520234 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
HMGB1P41-201ENST00000520234 Q6ZTI0 123 aa1.8□□□□□ -2.12
HMGB1P41-201ENST00000520234 TMEM254Q8TBM7 123 aa1.8□□□□□ -2.12
HMGB1P41-201ENST00000520234 HIVEP3Q5T1R4 2406 aa1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 DOPEY1Q5JWR5 2465 aa1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 A6NN06 94 aa1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 LYRM9A8MSI8 78 aa1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 BPY2O14599 106 aa1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 LECT2O14960 151 aa1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 RBM3P98179 157 aaKnown RBP1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 RNASE13Q5GAN3 156 aaKnown RBP1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 PHF5AQ7RTV0 110 aaKnown RBP1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 Q8N814 137 aa1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 CYP4F30PQ9H0H9 118 aa1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 C11orf68Q9H3H3 251 aaKnown RBP1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 SND1-IT1Q9HBX3 110 aa1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 ORMDL1Q9P0S3 153 aa1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 RBM12B-AS1Q9P1G2 102 aa1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 ITPR1Q14643 2758 aa1.79□□□□□ -2.12
HMGB1P41-201ENST00000520234 IGF2RP11717 2491 aa1.78□□□□□ -2.12
HMGB1P41-201ENST00000520234 IGHV3-73A0A0B4J1V6 119 aa1.78□□□□□ -2.12
HMGB1P41-201ENST00000520234 TRAV22A0A0B4J277 110 aa1.78□□□□□ -2.12
HMGB1P41-201ENST00000520234 IGHV3OR16-9A0A0B4J2B5 98 aa1.78□□□□□ -2.12
HMGB1P41-201ENST00000520234 TMEM256-PLSCR3K7ERE1 68 aa1.78□□□□□ -2.12
HMGB1P41-201ENST00000520234 IGLV1-51P01701 117 aa1.78□□□□□ -2.12
HMGB1P41-201ENST00000520234 CRPP02741 224 aa1.78□□□□□ -2.12
HMGB1P41-201ENST00000520234 PRM2P04554 102 aa1.78□□□□□ -2.12
HMGB1P41-201ENST00000520234 NREPQ16612 68 aa1.78□□□□□ -2.12
HMGB1P41-201ENST00000520234 Q5VV11 94 aa1.78□□□□□ -2.12
HMGB1P41-201ENST00000520234 KTN1-AS1Q86SY8 53 aa1.78□□□□□ -2.12
HMGB1P41-201ENST00000520234 CFAP46Q8IYW2 2715 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 TRGV1A0A0A0MS02 117 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 TRBV6-8A0A0A6YYG3 113 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 M0R378 163 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 IGKV4-1P06312 121 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 HTN1P15515 57 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 PDE6GP18545 87 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 DEFB136Q30KP8 78 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 KRTAP13-2Q52LG2 175 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 LINC00575Q6W349 94 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 C1orf64Q8NEQ6 169 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 MUC7Q8TAX7 377 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 DYNLRB2Q8TF09 96 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 UBL5Q9BZL1 73 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 RETNQ9HD89 108 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 CACNA1AO00555 2505 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 NBASA2RRP1 2371 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
HMGB1P41-201ENST00000520234 MAP1AP78559 2803 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 ASH1LQ9NR48 2969 aaKnown RBP1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 RELNP78509 3460 aa1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 CSPG4Q6UVK1 2322 aa1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 LINC00959A0A1B0GUT2 108 aa1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 C16orf90A8MZG2 172 aa1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 PSCAO43653 123 aa1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 FUSP35637 526 aaKnown RBP eCLIP1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 COX17Q14061 63 aa1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 KPRPQ5T749 579 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 LCA10Q71F78 164 aa1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 Q8IZM0 81 aa1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 Q8NDZ9 215 aa1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 COX7B2Q8TF08 81 aa1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 NOP10Q9NPE3 64 aaKnown RBP1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 PLAC8Q9NZF1 115 aa1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 SVEP1Q4LDE5 3571 aa1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 SPG11Q96JI7 2443 aa1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 APCP25054 2843 aa1.76□□□□□ -2.13
HMGB1P41-201ENST00000520234 USP9XQ93008 2570 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 PIEZO1Q92508 2521 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 PTPN13Q12923 2485 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 PKD1L2Q7Z442 2459 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 MXRA5Q9NR99 2828 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 UBR5O95071 2799 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 TRGV2A0A075B6R0 118 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 TRGV4A0A0C4DH28 118 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 LOC101927531A0A1B0GV80 90 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 H3BQ85 93 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 UBE2L6O14933 153 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 DAD1P61803 113 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 ATP11AUNQ6ZP68 121 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 DIRC1Q969H9 104 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 FLNCQ14315 2725 aa1.75□□□□□ -2.13
HMGB1P41-201ENST00000520234 ANKRD17O75179 2603 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms