RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 LINC00158P58513 81 aa5.08□□□□□ -1.6
TRIM35-202ENST00000519219 COL5A1-AS1Q5SY13 56 aa5.08□□□□□ -1.6
TRIM35-202ENST00000519219 BVES-AS1Q5T3Y7 98 aa5.08□□□□□ -1.6
TRIM35-202ENST00000519219 MRPL55Q7Z7F7 128 aaKnown RBP5.08□□□□□ -1.6
TRIM35-202ENST00000519219 SNHG12Q9BXW3 62 aa5.08□□□□□ -1.6
TRIM35-202ENST00000519219 SMIM13P0DJ93 91 aa5.07□□□□□ -1.6
TRIM35-202ENST00000519219 CRYGAP11844 174 aa5.07□□□□□ -1.6
TRIM35-202ENST00000519219 PFN2P35080 140 aa5.07□□□□□ -1.6
TRIM35-202ENST00000519219 NPC2P61916 151 aa5.07□□□□□ -1.6
TRIM35-202ENST00000519219 RPL24P83731 157 aaKnown RBP5.07□□□□□ -1.6
TRIM35-202ENST00000519219 Q6ZVH6 145 aa5.07□□□□□ -1.6
TRIM35-202ENST00000519219 KRTAP13-1Q8IUC0 172 aa5.07□□□□□ -1.6
TRIM35-202ENST00000519219 LINC00167Q96N53 147 aa5.07□□□□□ -1.6
TRIM35-202ENST00000519219 SPANXDQ9BXN6 97 aa5.07□□□□□ -1.6
TRIM35-202ENST00000519219 SPANXCQ9NY87 97 aa5.07□□□□□ -1.6
TRIM35-202ENST00000519219 RPL28P46779 137 aaKnown RBP5.06□□□□□ -1.6
TRIM35-202ENST00000519219 LBHQ53QV2 105 aaPredicted RBP5.06□□□□□ -1.6
TRIM35-202ENST00000519219 DAND5Q8N907 189 aa5.06□□□□□ -1.6
TRIM35-202ENST00000519219 NHP2Q9NX24 153 aaKnown RBP5.06□□□□□ -1.6
TRIM35-202ENST00000519219 ERG28Q9UKR5 140 aa5.06□□□□□ -1.6
TRIM35-202ENST00000519219 IFITM1P13164 125 aa5.05□□□□□ -1.6
TRIM35-202ENST00000519219 FXYD2P54710 66 aa5.05□□□□□ -1.6
TRIM35-202ENST00000519219 MUSTN1Q8IVN3 82 aa5.05□□□□□ -1.6
TRIM35-202ENST00000519219 MIR7-3HGQ8N6C7 128 aa5.04□□□□□ -1.6
TRIM35-202ENST00000519219 LINC00304Q8N9R0 145 aa5.04□□□□□ -1.6
TRIM35-202ENST00000519219 RAB37Q96AX2 223 aa5.04□□□□□ -1.6
TRIM35-202ENST00000519219 LITAFQ99732 161 aa5.04□□□□□ -1.6
TRIM35-202ENST00000519219 IGLV7-46A0A075B6I9 117 aa5.03□□□□□ -1.6
TRIM35-202ENST00000519219 K7ERJ3 54 aa5.03□□□□□ -1.6
TRIM35-202ENST00000519219 COX17Q14061 63 aa5.03□□□□□ -1.6
TRIM35-202ENST00000519219 TPRXLQ17RH7 258 aa5.03□□□□□ -1.6
TRIM35-202ENST00000519219 ADAMTSL4-AS1Q5T5F5 129 aa5.03□□□□□ -1.6
TRIM35-202ENST00000519219 LINC00308Q8TCZ7 52 aa5.03□□□□□ -1.6
TRIM35-202ENST00000519219 IGLV5-37A0A075B6J1 123 aa5.02□□□□□ -1.61
TRIM35-202ENST00000519219 IGKV2-28A0A075B6P5 120 aa5.02□□□□□ -1.61
TRIM35-202ENST00000519219 A4D1N5 150 aa5.02□□□□□ -1.61
TRIM35-202ENST00000519219 IGKV2D-28P01615 120 aa5.02□□□□□ -1.61
TRIM35-202ENST00000519219 UBE2AP49459 152 aa5.02□□□□□ -1.61
TRIM35-202ENST00000519219 PRLHP81277 87 aa5.02□□□□□ -1.61
TRIM35-202ENST00000519219 Q1RN00 199 aa5.02□□□□□ -1.61
TRIM35-202ENST00000519219 C3orf22Q8N5N4 141 aa5.02□□□□□ -1.61
TRIM35-202ENST00000519219 CDIP1Q9H305 208 aa5.02□□□□□ -1.61
TRIM35-202ENST00000519219 Q8NDZ9 215 aa5.01□□□□□ -1.61
TRIM35-202ENST00000519219 FAM229BQ4G0N7 80 aa5□□□□□ -1.61
TRIM35-202ENST00000519219 KRTAP4-1Q9BYQ7 146 aa5□□□□□ -1.61
TRIM35-202ENST00000519219 SND1-IT1Q9HBX3 110 aa5□□□□□ -1.61
TRIM35-202ENST00000519219 A0A0B4J2C4 111 aa4.99□□□□□ -1.61
TRIM35-202ENST00000519219 H7C2G1 150 aa4.99□□□□□ -1.61
TRIM35-202ENST00000519219 LCE2DQ5TA82 110 aaPredicted RBP4.99□□□□□ -1.61
TRIM35-202ENST00000519219 NKAPP1Q8N9T2 125 aa4.99□□□□□ -1.61
TRIM35-202ENST00000519219 PRO1854Q9UHT4 67 aa4.99□□□□□ -1.61
TRIM35-202ENST00000519219 TRAV13-2A0A0B4J235 113 aa4.98□□□□□ -1.61
TRIM35-202ENST00000519219 A0A1B0GWB2 263 aa4.98□□□□□ -1.61
TRIM35-202ENST00000519219 TAX1BP3O14907 124 aa4.98□□□□□ -1.61
TRIM35-202ENST00000519219 CFC1BP0CG36 223 aa4.98□□□□□ -1.61
TRIM35-202ENST00000519219 CFC1P0CG37 223 aa4.98□□□□□ -1.61
TRIM35-202ENST00000519219 VPREB1P12018 145 aa4.98□□□□□ -1.61
TRIM35-202ENST00000519219 PSMB2P49721 201 aa4.98□□□□□ -1.61
TRIM35-202ENST00000519219 LYRM7Q5U5X0 104 aa4.98□□□□□ -1.61
TRIM35-202ENST00000519219 SOSTDC1Q6X4U4 206 aa4.98□□□□□ -1.61
TRIM35-202ENST00000519219 FAM19A1Q7Z5A9 133 aa4.98□□□□□ -1.61
TRIM35-202ENST00000519219 PPDPFQ9H3Y8 114 aa4.98□□□□□ -1.61
TRIM35-202ENST00000519219 A0A1B0GV90 55 aa4.97□□□□□ -1.61
TRIM35-202ENST00000519219 C9orf118A6NHY6 69 aa4.97□□□□□ -1.61
TRIM35-202ENST00000519219 H3BUT2 72 aa4.97□□□□□ -1.61
TRIM35-202ENST00000519219 M0R378 163 aa4.97□□□□□ -1.61
TRIM35-202ENST00000519219 VAMP3Q15836 100 aa4.97□□□□□ -1.61
TRIM35-202ENST00000519219 OR13C6PQ8NH95 151 aa4.97□□□□□ -1.61
TRIM35-202ENST00000519219 NAA38Q9BRA0 125 aaKnown RBP4.97□□□□□ -1.61
TRIM35-202ENST00000519219 TMEM126AQ9H061 195 aa4.97□□□□□ -1.61
TRIM35-202ENST00000519219 LOC107984156A0A0G2JMH3 177 aa4.96□□□□□ -1.62
TRIM35-202ENST00000519219 NCR3O14931 201 aa4.96□□□□□ -1.62
TRIM35-202ENST00000519219 EIF4EBP3O60516 100 aaPredicted RBP4.96□□□□□ -1.62
TRIM35-202ENST00000519219 FABP2P12104 132 aa4.96□□□□□ -1.62
TRIM35-202ENST00000519219 ARL17AQ8IVW1 177 aa4.96□□□□□ -1.62
TRIM35-202ENST00000519219 NDUFC2O95298 119 aa4.95□□□□□ -1.62
TRIM35-202ENST00000519219 COX6CP09669 75 aa4.95□□□□□ -1.62
TRIM35-202ENST00000519219 SCGB1C2P0DMR2 95 aa4.95□□□□□ -1.62
TRIM35-202ENST00000519219 KRTAP13-3Q3SY46 172 aa4.95□□□□□ -1.62
TRIM35-202ENST00000519219 S100A7L2Q5SY68 101 aa4.95□□□□□ -1.62
TRIM35-202ENST00000519219 A0A1W2PPM0 123 aa4.94□□□□□ -1.62
TRIM35-202ENST00000519219 HIGD2AQ9BW72 106 aa4.94□□□□□ -1.62
TRIM35-202ENST00000519219 GTF2H5Q6ZYL4 71 aa4.93□□□□□ -1.62
TRIM35-202ENST00000519219 SPCS1Q9Y6A9 102 aa4.93□□□□□ -1.62
TRIM35-202ENST00000519219 ASB16-AS1Q495Z4 193 aa4.92□□□□□ -1.62
TRIM35-202ENST00000519219 LINC00337Q8N6G1 96 aa4.92□□□□□ -1.62
TRIM35-202ENST00000519219 SPRR4Q96PI1 79 aa4.92□□□□□ -1.62
TRIM35-202ENST00000519219 TRBV10-2A0A0K0K1G8 114 aa4.91□□□□□ -1.62
TRIM35-202ENST00000519219 KRTAP9-7A8MTY7 169 aa4.91□□□□□ -1.62
TRIM35-202ENST00000519219 Q8NBF4 154 aa4.91□□□□□ -1.62
TRIM35-202ENST00000519219 CBY1Q9Y3M2 126 aa4.91□□□□□ -1.62
TRIM35-202ENST00000519219 K7EP34 96 aa4.9□□□□□ -1.63
TRIM35-202ENST00000519219 TRIAP1O43715 76 aa4.9□□□□□ -1.63
TRIM35-202ENST00000519219 LINC01547P58512 204 aaPredicted RBP4.9□□□□□ -1.63
TRIM35-202ENST00000519219 FP248Q71RG6 208 aaPredicted RBP4.9□□□□□ -1.63
TRIM35-202ENST00000519219 FSIP2Q5CZC0 6907 aa4.9□□□□□ -1.63
TRIM35-202ENST00000519219 TRBV20-1A0A075B6N2 111 aa4.89□□□□□ -1.63
TRIM35-202ENST00000519219 TRAV23DV6A0A075B6W5 121 aa4.89□□□□□ -1.63
TRIM35-202ENST00000519219 ATXN8Q156A1 80 aa4.89□□□□□ -1.63
TRIM35-202ENST00000519219 LCE2CQ5TA81 110 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms