RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CST7O76096 145 aa2.03□□□□□ -2.08
HMGB1P23-201ENST00000518743 RPS25P62851 125 aaKnown RBP2.03□□□□□ -2.08
HMGB1P23-201ENST00000518743 TCTE3Q8IZS6 198 aa2.03□□□□□ -2.08
HMGB1P23-201ENST00000518743 OR5H6Q8NGV6 325 aa2.03□□□□□ -2.08
HMGB1P23-201ENST00000518743 AGPAT4-IT1Q9H0P7 198 aa2.03□□□□□ -2.08
HMGB1P23-201ENST00000518743 TCRBV3S1A0A5B6 114 aa2.02□□□□□ -2.09
HMGB1P23-201ENST00000518743 C17orf112F2Z3M2 114 aa2.02□□□□□ -2.09
HMGB1P23-201ENST00000518743 HIST1H2BKO60814 126 aa2.02□□□□□ -2.09
HMGB1P23-201ENST00000518743 HYPMO75409 117 aa2.02□□□□□ -2.09
HMGB1P23-201ENST00000518743 HIST1H2BJP06899 126 aa2.02□□□□□ -2.09
HMGB1P23-201ENST00000518743 NMBP08949 121 aa2.02□□□□□ -2.09
HMGB1P23-201ENST00000518743 NBEAP1P0C6P0 100 aa2.02□□□□□ -2.09
HMGB1P23-201ENST00000518743 S100A10P60903 97 aa2.02□□□□□ -2.09
HMGB1P23-201ENST00000518743 CLLU1Q5K131 121 aa2.02□□□□□ -2.09
HMGB1P23-201ENST00000518743 PRR15Q8IV56 129 aa2.02□□□□□ -2.09
HMGB1P23-201ENST00000518743 COMMD3Q9UBI1 195 aa2.02□□□□□ -2.09
HMGB1P23-201ENST00000518743 IGKV2-40A0A087WW87 121 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P23-201ENST00000518743 M0R3E3 92 aa2.01□□□□□ -2.09
HMGB1P23-201ENST00000518743 IGKV2D-40P01614 121 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P23-201ENST00000518743 S100PP25815 95 aa2.01□□□□□ -2.09
HMGB1P23-201ENST00000518743 RPL35P42766 123 aaKnown RBP2.01□□□□□ -2.09
HMGB1P23-201ENST00000518743 NDUFA6P56556 154 aa2.01□□□□□ -2.09
HMGB1P23-201ENST00000518743 RAB4BP61018 213 aa2.01□□□□□ -2.09
HMGB1P23-201ENST00000518743 FAM74A4Q5TZK3 123 aa2.01□□□□□ -2.09
HMGB1P23-201ENST00000518743 SOSTDC1Q6X4U4 206 aa2.01□□□□□ -2.09
HMGB1P23-201ENST00000518743 TMEM254Q8TBM7 123 aa2.01□□□□□ -2.09
HMGB1P23-201ENST00000518743 SFT2D1Q8WV19 159 aa2.01□□□□□ -2.09
HMGB1P23-201ENST00000518743 ATG5Q9H1Y0 275 aa2.01□□□□□ -2.09
HMGB1P23-201ENST00000518743 TRBV25-1A0A075B6N4 114 aa2□□□□□ -2.09
HMGB1P23-201ENST00000518743 TRAV12-1A0A0B4J245 112 aa2□□□□□ -2.09
HMGB1P23-201ENST00000518743 LINC00587B1AMM8 73 aa2□□□□□ -2.09
HMGB1P23-201ENST00000518743 NUPR1O60356 82 aa2□□□□□ -2.09
HMGB1P23-201ENST00000518743 IL5P05113 134 aa2□□□□□ -2.09
HMGB1P23-201ENST00000518743 IL7P13232 177 aa2□□□□□ -2.09
HMGB1P23-201ENST00000518743 PDE6HQ13956 83 aa2□□□□□ -2.09
HMGB1P23-201ENST00000518743 NMSQ5H8A3 153 aa2□□□□□ -2.09
HMGB1P23-201ENST00000518743 TEX261Q6UWH6 196 aa2□□□□□ -2.09
HMGB1P23-201ENST00000518743 HYLS1Q96M11 299 aa2□□□□□ -2.09
HMGB1P23-201ENST00000518743 NAA38Q9BRA0 125 aaKnown RBP2□□□□□ -2.09
HMGB1P23-201ENST00000518743 U3KQ87 197 aa2□□□□□ -2.09
HMGB1P23-201ENST00000518743 TRBV7-3A0A075B6L6 115 aa1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 IGHV1-58A0A0C4DH39 117 aa1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 TRBV6-5A0A0K0K1A5 114 aa1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 TRDV1A0A1B0GX56 115 aa1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 C9orf170A2RU37 121 aa1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 SPINK1P00995 79 aa1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 S100A8P05109 93 aa1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 UBE2D2P62837 147 aa1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 HBBP68871 147 aa1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 RNASE10Q5GAN6 216 aaKnown RBP1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 C2orf82Q6UX34 121 aa1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 DEFB107AQ8IZN7 70 aa1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 C12orf57Q99622 126 aa1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 CYSTM1Q9H1C7 97 aa1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P23-201ENST00000518743 SCGB1A1P11684 91 aa1.98□□□□□ -2.09
HMGB1P23-201ENST00000518743 RPS28P62857 69 aaKnown RBP1.98□□□□□ -2.09
HMGB1P23-201ENST00000518743 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
HMGB1P23-201ENST00000518743 C2orf88Q9BSF0 95 aa1.98□□□□□ -2.09
HMGB1P23-201ENST00000518743 H3BQ15 152 aa1.97□□□□□ -2.09
HMGB1P23-201ENST00000518743 LYRM1O43325 122 aa1.97□□□□□ -2.09
HMGB1P23-201ENST00000518743 BCE1O60756 84 aa1.97□□□□□ -2.09
HMGB1P23-201ENST00000518743 SMIM6P0DI80 62 aa1.97□□□□□ -2.09
HMGB1P23-201ENST00000518743 MT4P47944 62 aa1.97□□□□□ -2.09
HMGB1P23-201ENST00000518743 Q6AWC8 147 aa1.97□□□□□ -2.09
HMGB1P23-201ENST00000518743 LINC00305Q7Z4B0 112 aa1.97□□□□□ -2.09
HMGB1P23-201ENST00000518743 C9orf62Q8N4C0 152 aa1.97□□□□□ -2.09
HMGB1P23-201ENST00000518743 AQP10Q96PS8 301 aa1.97□□□□□ -2.09
HMGB1P23-201ENST00000518743 NAT8BQ9UHF3 227 aa1.97□□□□□ -2.09
HMGB1P23-201ENST00000518743 SCP2D1Q9UJQ7 156 aa1.97□□□□□ -2.09
HMGB1P23-201ENST00000518743 TRBV20-1A0A075B6N2 111 aa1.96□□□□□ -2.1
HMGB1P23-201ENST00000518743 TRAV21A0A0B4J279 112 aa1.96□□□□□ -2.1
HMGB1P23-201ENST00000518743 IGHV1-24A0A0C4DH33 117 aa1.96□□□□□ -2.1
HMGB1P23-201ENST00000518743 TRBV10-1A0A0K0K1A3 114 aa1.96□□□□□ -2.1
HMGB1P23-201ENST00000518743 CXCL1P09341 107 aa1.96□□□□□ -2.1
HMGB1P23-201ENST00000518743 SDC2P34741 201 aa1.96□□□□□ -2.1
HMGB1P23-201ENST00000518743 CYP2G1PQ6ZSU1 146 aa1.96□□□□□ -2.1
HMGB1P23-201ENST00000518743 SNX29P2Q8IUI4 249 aa1.96□□□□□ -2.1
HMGB1P23-201ENST00000518743 C8orf59Q8N0T1 100 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P23-201ENST00000518743 TP53RKQ96S44 253 aa1.96□□□□□ -2.1
HMGB1P23-201ENST00000518743 TCEAL7Q9BRU2 100 aa1.96□□□□□ -2.1
HMGB1P23-201ENST00000518743 FXYD6Q9H0Q3 95 aa1.96□□□□□ -2.1
HMGB1P23-201ENST00000518743 COPZ2Q9P299 210 aa1.96□□□□□ -2.1
HMGB1P23-201ENST00000518743 FXYD6-FXYD2A0A087WZ82 144 aa1.95□□□□□ -2.1
HMGB1P23-201ENST00000518743 F6UZH7 168 aa1.95□□□□□ -2.1
HMGB1P23-201ENST00000518743 MPC2O95563 127 aa1.95□□□□□ -2.1
HMGB1P23-201ENST00000518743 IGLC2P0DOY2 106 aa1.95□□□□□ -2.1
HMGB1P23-201ENST00000518743 S100A11P31949 105 aa1.95□□□□□ -2.1
HMGB1P23-201ENST00000518743 RPL37P61927 97 aaKnown RBP1.95□□□□□ -2.1
HMGB1P23-201ENST00000518743 RRAS2P62070 204 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P23-201ENST00000518743 PATE2Q6UY27 113 aa1.95□□□□□ -2.1
HMGB1P23-201ENST00000518743 CHCHD1Q96BP2 118 aaKnown RBP1.95□□□□□ -2.1
HMGB1P23-201ENST00000518743 C14orf144Q96I85 54 aa1.95□□□□□ -2.1
HMGB1P23-201ENST00000518743 TPRKBQ9Y3C4 175 aa1.95□□□□□ -2.1
HMGB1P23-201ENST00000518743 SNURFQ9Y675 71 aa1.95□□□□□ -2.1
HMGB1P23-201ENST00000518743 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
HMGB1P23-201ENST00000518743 BORCS7-ASMTA0A0B4J1R7 106 aa1.94□□□□□ -2.1
HMGB1P23-201ENST00000518743 LOC100130705A0A1B0GUX0 176 aa1.94□□□□□ -2.1
HMGB1P23-201ENST00000518743 MRPS36P82909 103 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms