RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 UBE2AP49459 152 aa3.76□□□□□ -1.81
PABPC1-207ENST00000518716 ZNF80P51504 273 aaPredicted RBP3.76□□□□□ -1.81
PABPC1-207ENST00000518716 ZFP2Q6ZN57 461 aa3.76□□□□□ -1.81
PABPC1-207ENST00000518716 MIR17HGQ75NE6 70 aa3.76□□□□□ -1.81
PABPC1-207ENST00000518716 PPP1R1CQ8WVI7 109 aa3.76□□□□□ -1.81
PABPC1-207ENST00000518716 CHCHD10Q8WYQ3 142 aaPredicted RBP3.76□□□□□ -1.81
PABPC1-207ENST00000518716 DIRC1Q969H9 104 aa3.76□□□□□ -1.81
PABPC1-207ENST00000518716 UBE2WQ96B02 151 aa3.76□□□□□ -1.81
PABPC1-207ENST00000518716 CHCHD7Q9BUK0 85 aa3.76□□□□□ -1.81
PABPC1-207ENST00000518716 NXT2Q9NPJ8 142 aaKnown RBP3.76□□□□□ -1.81
PABPC1-207ENST00000518716 IGLV9-49A0A0B4J1Y8 123 aa3.75□□□□□ -1.81
PABPC1-207ENST00000518716 hADV29S1A0JD25 119 aa3.75□□□□□ -1.81
PABPC1-207ENST00000518716 TIMM17BO60830 172 aa3.75□□□□□ -1.81
PABPC1-207ENST00000518716 RNASE3P12724 160 aaKnown RBP3.75□□□□□ -1.81
PABPC1-207ENST00000518716 LINC00313P59037 77 aa3.75□□□□□ -1.81
PABPC1-207ENST00000518716 ATP11AUNQ6ZP68 121 aa3.75□□□□□ -1.81
PABPC1-207ENST00000518716 C14orf178Q8N769 122 aaPredicted RBP3.75□□□□□ -1.81
PABPC1-207ENST00000518716 ZC2HC1AQ96GY0 325 aa3.75□□□□□ -1.81
PABPC1-207ENST00000518716 NPCDR1Q9BY65 106 aa3.75□□□□□ -1.81
PABPC1-207ENST00000518716 PLAC8Q9NZF1 115 aa3.75□□□□□ -1.81
PABPC1-207ENST00000518716 A0A087WYN8 130 aa3.74□□□□□ -1.81
PABPC1-207ENST00000518716 NUPR1O60356 82 aa3.74□□□□□ -1.81
PABPC1-207ENST00000518716 CNBPP62633 177 aaKnown RBP3.74□□□□□ -1.81
PABPC1-207ENST00000518716 FAM104BQ5XKR9 115 aa3.74□□□□□ -1.81
PABPC1-207ENST00000518716 FP248Q71RG6 208 aaPredicted RBP3.74□□□□□ -1.81
PABPC1-207ENST00000518716 SPACA4Q8TDM5 124 aa3.74□□□□□ -1.81
PABPC1-207ENST00000518716 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
PABPC1-207ENST00000518716 FSIP2Q5CZC0 6907 aa3.74□□□□□ -1.81
PABPC1-207ENST00000518716 LTAP01374 205 aa3.73□□□□□ -1.81
PABPC1-207ENST00000518716 HERVK_113P61574 105 aa3.73□□□□□ -1.81
PABPC1-207ENST00000518716 LINC01554Q52M75 96 aa3.73□□□□□ -1.81
PABPC1-207ENST00000518716 C2orf91Q6ZV80 131 aa3.73□□□□□ -1.81
PABPC1-207ENST00000518716 TMEM252Q8N6L7 170 aa3.73□□□□□ -1.81
PABPC1-207ENST00000518716 TMEM243Q9BU79 118 aa3.73□□□□□ -1.81
PABPC1-207ENST00000518716 PRR34Q9NV39 138 aa3.73□□□□□ -1.81
PABPC1-207ENST00000518716 EPDR1Q9UM22 224 aa3.73□□□□□ -1.81
PABPC1-207ENST00000518716 KIF25-AS1Q9Y6Z4 181 aa3.73□□□□□ -1.81
PABPC1-207ENST00000518716 MUC17Q685J3 4493 aa3.72□□□□□ -1.81
PABPC1-207ENST00000518716 CHTF8P0CG12 524 aa3.72□□□□□ -1.81
PABPC1-207ENST00000518716 XAGE1AQ9HD64 81 aa3.72□□□□□ -1.81
PABPC1-207ENST00000518716 IL36BQ9NZH7 164 aa3.72□□□□□ -1.81
PABPC1-207ENST00000518716 ARL2-SNX15V9GYD0 113 aa3.72□□□□□ -1.81
PABPC1-207ENST00000518716 IGLV5-37A0A075B6J1 123 aa3.71□□□□□ -1.82
PABPC1-207ENST00000518716 IGKV3D-20A0A0C4DH25 116 aa3.71□□□□□ -1.82
PABPC1-207ENST00000518716 UBE2D3P61077 147 aa3.71□□□□□ -1.82
PABPC1-207ENST00000518716 UBE2D2P62837 147 aa3.71□□□□□ -1.82
PABPC1-207ENST00000518716 MIAQ16674 131 aa3.71□□□□□ -1.82
PABPC1-207ENST00000518716 SPINK6Q6UWN8 80 aa3.71□□□□□ -1.82
PABPC1-207ENST00000518716 Q8N8P6 123 aa3.71□□□□□ -1.82
PABPC1-207ENST00000518716 CHCHD1Q96BP2 118 aaKnown RBP3.71□□□□□ -1.82
PABPC1-207ENST00000518716 MRPL35Q9NZE8 188 aaKnown RBP3.71□□□□□ -1.82
PABPC1-207ENST00000518716 TRBV6-8A0A0A6YYG3 113 aa3.7□□□□□ -1.82
PABPC1-207ENST00000518716 CCKP06307 115 aa3.7□□□□□ -1.82
PABPC1-207ENST00000518716 Q1T7F1 81 aa3.7□□□□□ -1.82
PABPC1-207ENST00000518716 ZC2HC1BQ5TFG8 222 aa3.7□□□□□ -1.82
PABPC1-207ENST00000518716 PRNTQ86SH4 94 aa3.7□□□□□ -1.82
PABPC1-207ENST00000518716 C11orf52Q96A22 123 aa3.7□□□□□ -1.82
PABPC1-207ENST00000518716 OSTCQ9NRP0 149 aa3.7□□□□□ -1.82
PABPC1-207ENST00000518716 TRBV7-3A0A075B6L6 115 aa3.69□□□□□ -1.82
PABPC1-207ENST00000518716 IGHV3-64A0A075B6Q5 118 aa3.69□□□□□ -1.82
PABPC1-207ENST00000518716 TRBV10-1A0A0K0K1A3 114 aa3.69□□□□□ -1.82
PABPC1-207ENST00000518716 NPYP01303 97 aa3.69□□□□□ -1.82
PABPC1-207ENST00000518716 IFI27L1Q96BM0 104 aa3.69□□□□□ -1.82
PABPC1-207ENST00000518716 TP73-AS1Q9UF72 201 aa3.69□□□□□ -1.82
PABPC1-207ENST00000518716 IGLV5-45A0A087WSX0 123 aa3.68□□□□□ -1.82
PABPC1-207ENST00000518716 K7ERJ3 54 aa3.68□□□□□ -1.82
PABPC1-207ENST00000518716 GCHFRP30047 84 aa3.68□□□□□ -1.82
PABPC1-207ENST00000518716 REG3GQ6UW15 175 aa3.68□□□□□ -1.82
PABPC1-207ENST00000518716 NTM-AS1Q6ZSK4 140 aa3.68□□□□□ -1.82
PABPC1-207ENST00000518716 C7orf33Q8WU49 177 aa3.68□□□□□ -1.82
PABPC1-207ENST00000518716 SMIM7Q9BQ49 75 aa3.68□□□□□ -1.82
PABPC1-207ENST00000518716 MYMXA0A1B0GTQ4 84 aa3.67□□□□□ -1.82
PABPC1-207ENST00000518716 PEX7O00628 323 aa3.67□□□□□ -1.82
PABPC1-207ENST00000518716 CRPP02741 224 aa3.67□□□□□ -1.82
PABPC1-207ENST00000518716 ANGP03950 147 aaKnown RBP3.67□□□□□ -1.82
PABPC1-207ENST00000518716 KLKP1Q107X0 134 aa3.67□□□□□ -1.82
PABPC1-207ENST00000518716 MRPL51Q4U2R6 128 aaKnown RBP3.67□□□□□ -1.82
PABPC1-207ENST00000518716 SPANXN1Q5VSR9 72 aa3.67□□□□□ -1.82
PABPC1-207ENST00000518716 LINC00269Q8N2A0 174 aa3.67□□□□□ -1.82
PABPC1-207ENST00000518716 GNG13Q9P2W3 67 aa3.67□□□□□ -1.82
PABPC1-207ENST00000518716 ZNF706Q9Y5V0 76 aaPredicted RBP3.67□□□□□ -1.82
PABPC1-207ENST00000518716 TRAV13-2A0A0B4J235 113 aa3.66□□□□□ -1.82
PABPC1-207ENST00000518716 SLC25A20O43772 301 aa3.66□□□□□ -1.82
PABPC1-207ENST00000518716 CRIP1P50238 77 aa3.66□□□□□ -1.82
PABPC1-207ENST00000518716 KRTAP10-12P60413 245 aa3.66□□□□□ -1.82
PABPC1-207ENST00000518716 RPL36AP83881 106 aaKnown RBP3.66□□□□□ -1.82
PABPC1-207ENST00000518716 COX6A2Q02221 97 aa3.66□□□□□ -1.82
PABPC1-207ENST00000518716 ZNF56Q15929 161 aa3.66□□□□□ -1.82
PABPC1-207ENST00000518716 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
PABPC1-207ENST00000518716 TIMM21Q9BVV7 248 aa3.66□□□□□ -1.82
PABPC1-207ENST00000518716 IGLV10-54A0A075B6I4 117 aa3.65□□□□□ -1.83
PABPC1-207ENST00000518716 H3BVH4 76 aa3.65□□□□□ -1.83
PABPC1-207ENST00000518716 LEPROTL1O95214 131 aa3.65□□□□□ -1.83
PABPC1-207ENST00000518716 ARMS2P0C7Q2 107 aa3.65□□□□□ -1.83
PABPC1-207ENST00000518716 RBM3P98179 157 aaKnown RBP3.65□□□□□ -1.83
PABPC1-207ENST00000518716 SS18Q15532 418 aa3.65□□□□□ -1.83
PABPC1-207ENST00000518716 LINC00173Q6ZV60 143 aa3.65□□□□□ -1.83
PABPC1-207ENST00000518716 C15orf56Q8N910 161 aa3.65□□□□□ -1.83
PABPC1-207ENST00000518716 C20orf203Q8NBC4 194 aa3.65□□□□□ -1.83
PABPC1-207ENST00000518716 FAM218AQ96MZ4 157 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms