RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 CFC1P0CG37 223 aa4.34□□□□□ -1.71
CPS1-210ENST00000518043 PRR3P79522 188 aaKnown RBP4.34□□□□□ -1.71
CPS1-210ENST00000518043 LINC00337Q8N6G1 96 aa4.34□□□□□ -1.71
CPS1-210ENST00000518043 APOBP04114 4563 aaKnown RBP4.34□□□□□ -1.71
CPS1-210ENST00000518043 PKHD1P08F94 4074 aa4.34□□□□□ -1.72
CPS1-210ENST00000518043 RYR1P21817 5038 aa4.33□□□□□ -1.72
CPS1-210ENST00000518043 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.33□□□□□ -1.72
CPS1-210ENST00000518043 A0A0B4J2C4 111 aa4.33□□□□□ -1.72
CPS1-210ENST00000518043 C16orf90A8MZG2 172 aa4.33□□□□□ -1.72
CPS1-210ENST00000518043 EPM2AB3EWF7 344 aa4.33□□□□□ -1.72
CPS1-210ENST00000518043 NDUFC2O95298 119 aa4.33□□□□□ -1.72
CPS1-210ENST00000518043 RPL18AQ02543 176 aaKnown RBP4.33□□□□□ -1.72
CPS1-210ENST00000518043 BATFQ16520 125 aa4.33□□□□□ -1.72
CPS1-210ENST00000518043 NHP2Q9NX24 153 aaKnown RBP4.33□□□□□ -1.72
CPS1-210ENST00000518043 A0A1W2PNN7 141 aa4.32□□□□□ -1.72
CPS1-210ENST00000518043 TAX1BP3O14907 124 aa4.32□□□□□ -1.72
CPS1-210ENST00000518043 KRTAP10-1P60331 282 aa4.32□□□□□ -1.72
CPS1-210ENST00000518043 LINC00336Q6ZUF6 198 aa4.32□□□□□ -1.72
CPS1-210ENST00000518043 SPACA4Q8TDM5 124 aa4.32□□□□□ -1.72
CPS1-210ENST00000518043 IGKV2-24A0A0C4DH68 120 aa4.31□□□□□ -1.72
CPS1-210ENST00000518043 NCR3O14931 201 aa4.31□□□□□ -1.72
CPS1-210ENST00000518043 Q6ZSA8 131 aa4.31□□□□□ -1.72
CPS1-210ENST00000518043 KRTAP11-1Q8IUC1 163 aa4.31□□□□□ -1.72
CPS1-210ENST00000518043 TRBV10-2A0A0K0K1G8 114 aa4.3□□□□□ -1.72
CPS1-210ENST00000518043 TSPAN13O95857 204 aa4.3□□□□□ -1.72
CPS1-210ENST00000518043 IGLV6-57P01721 117 aa4.3□□□□□ -1.72
CPS1-210ENST00000518043 C7orf33Q8WU49 177 aa4.3□□□□□ -1.72
CPS1-210ENST00000518043 KIAA1109Q2LD37 5005 aa4.3□□□□□ -1.72
CPS1-210ENST00000518043 A6NDN8 102 aa4.29□□□□□ -1.72
CPS1-210ENST00000518043 RPL13AP40429 203 aaKnown RBP4.29□□□□□ -1.72
CPS1-210ENST00000518043 COL5A1-AS1Q5SY13 56 aa4.29□□□□□ -1.72
CPS1-210ENST00000518043 FAM19A5Q7Z5A7 132 aaPredicted RBP4.29□□□□□ -1.72
CPS1-210ENST00000518043 COPS9Q8WXC6 57 aa4.29□□□□□ -1.72
CPS1-210ENST00000518043 NAA38Q9BRA0 125 aaKnown RBP4.29□□□□□ -1.72
CPS1-210ENST00000518043 PRO1854Q9UHT4 67 aa4.29□□□□□ -1.72
CPS1-210ENST00000518043 TRBV10-3A0A0K0K1G6 114 aa4.28□□□□□ -1.72
CPS1-210ENST00000518043 RAB37Q96AX2 223 aa4.28□□□□□ -1.72
CPS1-210ENST00000518043 PLAC8Q9NZF1 115 aa4.28□□□□□ -1.72
CPS1-210ENST00000518043 C22orf24Q9Y442 160 aa4.28□□□□□ -1.72
CPS1-210ENST00000518043 BIRC6Q9NR09 4857 aa4.28□□□□□ -1.72
CPS1-210ENST00000518043 A0A087WYN8 130 aa4.27□□□□□ -1.73
CPS1-210ENST00000518043 M0R378 163 aa4.27□□□□□ -1.73
CPS1-210ENST00000518043 LINC01547P58512 204 aaPredicted RBP4.27□□□□□ -1.73
CPS1-210ENST00000518043 LINC00167Q96N53 147 aa4.27□□□□□ -1.73
CPS1-210ENST00000518043 PKIGQ9Y2B9 76 aa4.27□□□□□ -1.73
CPS1-210ENST00000518043 IGLV1-50A0A075B6I6 118 aa4.26□□□□□ -1.73
CPS1-210ENST00000518043 TRAV13-2A0A0B4J235 113 aa4.26□□□□□ -1.73
CPS1-210ENST00000518043 KRTAP4-16G5E9R7 235 aaPredicted RBP4.26□□□□□ -1.73
CPS1-210ENST00000518043 M0QXV9 152 aa4.26□□□□□ -1.73
CPS1-210ENST00000518043 LBHQ53QV2 105 aaPredicted RBP4.26□□□□□ -1.73
CPS1-210ENST00000518043 PHF5AQ7RTV0 110 aaKnown RBP4.26□□□□□ -1.73
CPS1-210ENST00000518043 SMIM11BQ8TCY0 68 aa4.26□□□□□ -1.73
CPS1-210ENST00000518043 RPL37AP8A6NKH3 93 aa4.25□□□□□ -1.73
CPS1-210ENST00000518043 H3BUT2 72 aa4.25□□□□□ -1.73
CPS1-210ENST00000518043 H7C2G1 150 aa4.25□□□□□ -1.73
CPS1-210ENST00000518043 SPRR1AP35321 89 aa4.25□□□□□ -1.73
CPS1-210ENST00000518043 RPL28P46779 137 aaKnown RBP4.25□□□□□ -1.73
CPS1-210ENST00000518043 HAMPP81172 84 aa4.25□□□□□ -1.73
CPS1-210ENST00000518043 SCXQ7RTU7 201 aa4.25□□□□□ -1.73
CPS1-210ENST00000518043 MRPL55Q7Z7F7 128 aaKnown RBP4.25□□□□□ -1.73
CPS1-210ENST00000518043 NKAPP1Q8N9T2 125 aa4.25□□□□□ -1.73
CPS1-210ENST00000518043 CIRBP-AS1Q8TBR5 109 aa4.25□□□□□ -1.73
CPS1-210ENST00000518043 KCNQ1DNQ9H478 68 aa4.25□□□□□ -1.73
CPS1-210ENST00000518043 LINC00474Q9P2X8 69 aa4.25□□□□□ -1.73
CPS1-210ENST00000518043 FAT1Q14517 4588 aa4.24□□□□□ -1.73
CPS1-210ENST00000518043 TRAV23DV6A0A075B6W5 121 aa4.24□□□□□ -1.73
CPS1-210ENST00000518043 A0A1B0GV90 55 aa4.24□□□□□ -1.73
CPS1-210ENST00000518043 OR13C6PQ8NH95 151 aa4.24□□□□□ -1.73
CPS1-210ENST00000518043 FAM218AQ96MZ4 157 aa4.24□□□□□ -1.73
CPS1-210ENST00000518043 TMEM126AQ9H061 195 aa4.24□□□□□ -1.73
CPS1-210ENST00000518043 A0A1W2PPM0 123 aa4.23□□□□□ -1.73
CPS1-210ENST00000518043 XGP55808 180 aa4.23□□□□□ -1.73
CPS1-210ENST00000518043 C6orf99Q4VX62 202 aa4.23□□□□□ -1.73
CPS1-210ENST00000518043 S100A7L2Q5SY68 101 aa4.23□□□□□ -1.73
CPS1-210ENST00000518043 HSPG2P98160 4391 aa4.22□□□□□ -1.73
CPS1-210ENST00000518043 ZNF73O43830 326 aaPredicted RBP4.22□□□□□ -1.73
CPS1-210ENST00000518043 Q1RN00 199 aa4.22□□□□□ -1.73
CPS1-210ENST00000518043 KRTAP13-1Q8IUC0 172 aa4.22□□□□□ -1.73
CPS1-210ENST00000518043 CLEC2BQ92478 149 aa4.22□□□□□ -1.73
CPS1-210ENST00000518043 TCL1BO95988 128 aa4.21□□□□□ -1.74
CPS1-210ENST00000518043 ELOF1P60002 83 aaKnown RBP4.21□□□□□ -1.74
CPS1-210ENST00000518043 TRBV7-6A0A0J9YX20 115 aa4.2□□□□□ -1.74
CPS1-210ENST00000518043 K7EP34 96 aa4.2□□□□□ -1.74
CPS1-210ENST00000518043 REG3GQ6UW15 175 aa4.2□□□□□ -1.74
CPS1-210ENST00000518043 DIRC1Q969H9 104 aa4.2□□□□□ -1.74
CPS1-210ENST00000518043 Q9BRP9 147 aa4.2□□□□□ -1.74
CPS1-210ENST00000518043 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
CPS1-210ENST00000518043 HERC2O95714 4834 aa4.19□□□□□ -1.74
CPS1-210ENST00000518043 LST1O00453 97 aa4.19□□□□□ -1.74
CPS1-210ENST00000518043 FABP2P12104 132 aa4.19□□□□□ -1.74
CPS1-210ENST00000518043 PSMB2P49721 201 aa4.19□□□□□ -1.74
CPS1-210ENST00000518043 KRTAP10-4P60372 401 aaPredicted RBP4.19□□□□□ -1.74
CPS1-210ENST00000518043 Q6ZRX8 168 aa4.19□□□□□ -1.74
CPS1-210ENST00000518043 SMCR5Q8TEV8 140 aa4.19□□□□□ -1.74
CPS1-210ENST00000518043 PSORS1C2Q9UIG4 136 aa4.19□□□□□ -1.74
CPS1-210ENST00000518043 SPCS1Q9Y6A9 102 aa4.19□□□□□ -1.74
CPS1-210ENST00000518043 PKHD1L1Q86WI1 4243 aa4.19□□□□□ -1.74
CPS1-210ENST00000518043 IGLV9-49A0A0B4J1Y8 123 aa4.18□□□□□ -1.74
CPS1-210ENST00000518043 BCE1O60756 84 aa4.18□□□□□ -1.74
CPS1-210ENST00000518043 ERC2-IT1O76042 136 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms