RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 ZNF815PA8K554 130 aa12.61□□□□□ -0.39
MTCL1-204ENST00000517554 UBE2AP49459 152 aa12.61□□□□□ -0.39
MTCL1-204ENST00000517554 NPC2P61916 151 aa12.61□□□□□ -0.39
MTCL1-204ENST00000517554 FAM19A1Q7Z5A9 133 aa12.6□□□□□ -0.39
MTCL1-204ENST00000517554 TRBV10-3A0A0K0K1G6 114 aa12.6□□□□□ -0.39
MTCL1-204ENST00000517554 PCP2Q8IVA1 136 aa12.59□□□□□ -0.39
MTCL1-204ENST00000517554 KCNQ1DNQ9H478 68 aa12.58□□□□□ -0.4
MTCL1-204ENST00000517554 TIMM17BO60830 172 aa12.57□□□□□ -0.4
MTCL1-204ENST00000517554 HIGD1BQ9P298 99 aa12.57□□□□□ -0.4
MTCL1-204ENST00000517554 TRBV10-2A0A0K0K1G8 114 aa12.56□□□□□ -0.4
MTCL1-204ENST00000517554 NDUFC2O95298 119 aa12.56□□□□□ -0.4
MTCL1-204ENST00000517554 SPRR1AP35321 89 aa12.56□□□□□ -0.4
MTCL1-204ENST00000517554 KRTAP4-16G5E9R7 235 aaPredicted RBP12.56□□□□□ -0.4
MTCL1-204ENST00000517554 PRYO14603 147 aa12.56□□□□□ -0.4
MTCL1-204ENST00000517554 HSD52Q0P140 79 aa12.56□□□□□ -0.4
MTCL1-204ENST00000517554 LINC00308Q8TCZ7 52 aa12.55□□□□□ -0.4
MTCL1-204ENST00000517554 SPANXB1Q9NS25 103 aaPredicted RBP12.55□□□□□ -0.4
MTCL1-204ENST00000517554 ANAPC11Q9NYG5 84 aa12.55□□□□□ -0.4
MTCL1-204ENST00000517554 A0A087X002 238 aa12.54□□□□□ -0.4
MTCL1-204ENST00000517554 IGLV6-57P01721 117 aa12.52□□□□□ -0.41
MTCL1-204ENST00000517554 LINC00337Q8N6G1 96 aa12.52□□□□□ -0.41
MTCL1-204ENST00000517554 TAX1BP3O14907 124 aa12.5□□□□□ -0.41
MTCL1-204ENST00000517554 HIGD2AQ9BW72 106 aa12.49□□□□□ -0.41
MTCL1-204ENST00000517554 RPL13AP40429 203 aaKnown RBP12.47□□□□□ -0.41
MTCL1-204ENST00000517554 SCGB1D4Q6XE38 83 aa12.47□□□□□ -0.41
MTCL1-204ENST00000517554 SPANXCQ9NY87 97 aa12.47□□□□□ -0.41
MTCL1-204ENST00000517554 KRTAP13-2Q52LG2 175 aa12.47□□□□□ -0.41
MTCL1-204ENST00000517554 SPANXDQ9BXN6 97 aa12.47□□□□□ -0.41
MTCL1-204ENST00000517554 TAL2Q16559 108 aa12.46□□□□□ -0.42
MTCL1-204ENST00000517554 S100A7L2Q5SY68 101 aa12.46□□□□□ -0.42
MTCL1-204ENST00000517554 ETDCA0A1B0GVM5 59 aa12.45□□□□□ -0.42
MTCL1-204ENST00000517554 B5MCH6 92 aa12.45□□□□□ -0.42
MTCL1-204ENST00000517554 A6NDN8 102 aa12.44□□□□□ -0.42
MTCL1-204ENST00000517554 CRYGAP11844 174 aa12.44□□□□□ -0.42
MTCL1-204ENST00000517554 Q6ZVH6 145 aa12.44□□□□□ -0.42
MTCL1-204ENST00000517554 SMCR5Q8TEV8 140 aa12.44□□□□□ -0.42
MTCL1-204ENST00000517554 FAM229BQ4G0N7 80 aa12.43□□□□□ -0.42
MTCL1-204ENST00000517554 TRAV23DV6A0A075B6W5 121 aa12.42□□□□□ -0.42
MTCL1-204ENST00000517554 SPRR4Q96PI1 79 aa12.41□□□□□ -0.42
MTCL1-204ENST00000517554 CEND1Q8N111 149 aa12.4□□□□□ -0.42
MTCL1-204ENST00000517554 Q9BRP9 147 aa12.4□□□□□ -0.42
MTCL1-204ENST00000517554 ERC2-IT1O76042 136 aa12.39□□□□□ -0.43
MTCL1-204ENST00000517554 ZNF73O43830 326 aaPredicted RBP12.39□□□□□ -0.43
MTCL1-204ENST00000517554 UBE2V1Q13404 147 aa12.39□□□□□ -0.43
MTCL1-204ENST00000517554 Q6ZRX8 168 aa12.39□□□□□ -0.43
MTCL1-204ENST00000517554 MUSTN1Q8IVN3 82 aa12.39□□□□□ -0.43
MTCL1-204ENST00000517554 TYMSOSQ8TAI1 123 aa12.39□□□□□ -0.43
MTCL1-204ENST00000517554 IFITM1P13164 125 aa12.38□□□□□ -0.43
MTCL1-204ENST00000517554 FXYD2P54710 66 aa12.38□□□□□ -0.43
MTCL1-204ENST00000517554 OR13C6PQ8NH95 151 aa12.37□□□□□ -0.43
MTCL1-204ENST00000517554 PPDPFQ9H3Y8 114 aa12.37□□□□□ -0.43
MTCL1-204ENST00000517554 C9orf118A6NHY6 69 aa12.36□□□□□ -0.43
MTCL1-204ENST00000517554 C3orf22Q8N5N4 141 aa12.35□□□□□ -0.43
MTCL1-204ENST00000517554 VAMP3Q15836 100 aa12.34□□□□□ -0.43
MTCL1-204ENST00000517554 HIST1H4GQ99525 98 aa12.32□□□□□ -0.44
MTCL1-204ENST00000517554 ZNF706Q9Y5V0 76 aaPredicted RBP12.32□□□□□ -0.44
MTCL1-204ENST00000517554 UBR4Q5T4S7 5183 aa12.32□□□□□ -0.44
MTCL1-204ENST00000517554 LRP2P98164 4655 aa12.31□□□□□ -0.44
MTCL1-204ENST00000517554 A0A1B0GWB2 263 aa12.3□□□□□ -0.44
MTCL1-204ENST00000517554 COPS9Q8WXC6 57 aa12.3□□□□□ -0.44
MTCL1-204ENST00000517554 TSPAN13O95857 204 aa12.3□□□□□ -0.44
MTCL1-204ENST00000517554 LINC00483Q53H64 154 aa12.3□□□□□ -0.44
MTCL1-204ENST00000517554 CBY1Q9Y3M2 126 aa12.28□□□□□ -0.44
MTCL1-204ENST00000517554 H3BUT2 72 aa12.27□□□□□ -0.44
MTCL1-204ENST00000517554 GAGE2AQ6NT46 116 aa12.27□□□□□ -0.44
MTCL1-204ENST00000517554 NHP2Q9NX24 153 aaKnown RBP12.27□□□□□ -0.44
MTCL1-204ENST00000517554 C6orf99Q4VX62 202 aa12.26□□□□□ -0.45
MTCL1-204ENST00000517554 RAB37Q96AX2 223 aa12.26□□□□□ -0.45
MTCL1-204ENST00000517554 A0A1W2PPM0 123 aa12.26□□□□□ -0.45
MTCL1-204ENST00000517554 ST20-AS1Q8NBB2 130 aa12.26□□□□□ -0.45
MTCL1-204ENST00000517554 LPAP08519 4548 aa12.26□□□□□ -0.45
MTCL1-204ENST00000517554 LINC00304Q8N9R0 145 aa12.25□□□□□ -0.45
MTCL1-204ENST00000517554 K7ERJ3 54 aa12.24□□□□□ -0.45
MTCL1-204ENST00000517554 ELOF1P60002 83 aaKnown RBP12.24□□□□□ -0.45
MTCL1-204ENST00000517554 TMEM238LA0A1B0GVL6 79 aa12.23□□□□□ -0.45
MTCL1-204ENST00000517554 A6NJY4 79 aa12.23□□□□□ -0.45
MTCL1-204ENST00000517554 K7EP34 96 aa12.23□□□□□ -0.45
MTCL1-204ENST00000517554 A4D1N5 150 aa12.22□□□□□ -0.45
MTCL1-204ENST00000517554 GTF2H5Q6ZYL4 71 aa12.22□□□□□ -0.45
MTCL1-204ENST00000517554 COX7BP24311 80 aa12.22□□□□□ -0.45
MTCL1-204ENST00000517554 NAA38Q9BRA0 125 aaKnown RBP12.21□□□□□ -0.46
MTCL1-204ENST00000517554 TRAV13-2A0A0B4J235 113 aa12.19□□□□□ -0.46
MTCL1-204ENST00000517554 FABP2P12104 132 aa12.19□□□□□ -0.46
MTCL1-204ENST00000517554 SMIM11BQ8TCY0 68 aa12.18□□□□□ -0.46
MTCL1-204ENST00000517554 DHRS4-AS1Q9P1J3 65 aa12.18□□□□□ -0.46
MTCL1-204ENST00000517554 TRBV7-6A0A0J9YX20 115 aa12.18□□□□□ -0.46
MTCL1-204ENST00000517554 SPCS1Q9Y6A9 102 aa12.18□□□□□ -0.46
MTCL1-204ENST00000517554 Q8NBF4 154 aa12.17□□□□□ -0.46
MTCL1-204ENST00000517554 IGLV9-49A0A0B4J1Y8 123 aa12.16□□□□□ -0.46
MTCL1-204ENST00000517554 PRR4Q16378 134 aa12.15□□□□□ -0.46
MTCL1-204ENST00000517554 MOBPQ13875 183 aa12.14□□□□□ -0.47
MTCL1-204ENST00000517554 SPRR1BP22528 89 aa12.13□□□□□ -0.47
MTCL1-204ENST00000517554 RETNLBQ9BQ08 111 aa12.13□□□□□ -0.47
MTCL1-204ENST00000517554 CFC1BP0CG36 223 aa12.12□□□□□ -0.47
MTCL1-204ENST00000517554 CFC1P0CG37 223 aa12.12□□□□□ -0.47
MTCL1-204ENST00000517554 SPAG11AQ6PDA7 123 aa12.1□□□□□ -0.47
MTCL1-204ENST00000517554 A0A0B4J2C4 111 aa12.09□□□□□ -0.47
MTCL1-204ENST00000517554 SSBP3-AS1Q7Z2R9 100 aa12.09□□□□□ -0.47
MTCL1-204ENST00000517554 LINC01547P58512 204 aaPredicted RBP12.08□□□□□ -0.48
MTCL1-204ENST00000517554 PRO1854Q9UHT4 67 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms