RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 SMIM29Q86T20 159 aa1.34□□□□□ -2.19
RNU1-40P-201ENST00000516816 WFDC13Q8IUB5 93 aa1.34□□□□□ -2.19
RNU1-40P-201ENST00000516816 C15orf56Q8N910 161 aa1.34□□□□□ -2.19
RNU1-40P-201ENST00000516816 SMR3AQ99954 134 aa1.34□□□□□ -2.19
RNU1-40P-201ENST00000516816 RBM12B-AS1Q9P1G2 102 aa1.34□□□□□ -2.19
RNU1-40P-201ENST00000516816 LINC00588Q9Y4M8 146 aa1.34□□□□□ -2.19
RNU1-40P-201ENST00000516816 SPTBN5Q9NRC6 3674 aaKnown RBP1.34□□□□□ -2.2
RNU1-40P-201ENST00000516816 TACC2O95359 2948 aa1.34□□□□□ -2.2
RNU1-40P-201ENST00000516816 TTC28Q96AY4 2481 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 SPEGQ15772 3267 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 AKAP13Q12802 2813 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 A0A087WSZ3 146 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 TRAV22A0A0B4J277 110 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 IGKV2-24A0A0C4DH68 120 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 LRCOL1A6NCL2 159 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 A6NED7 52 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 NUPR2A6NF83 97 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 M0R2N4 97 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 DSCR10P59022 87 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 CNBPP62633 177 aaKnown RBP1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 KRTAP26-1Q6PEX3 210 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 IGFL1Q6UW32 110 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 ATP11AUNQ6ZP68 121 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 LCA10Q71F78 164 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 Q8N9L7 120 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 ST20-AS1Q8NBB2 130 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 CYSTM1Q9H1C7 97 aa1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.33□□□□□ -2.2
RNU1-40P-201ENST00000516816 TEX15Q9BXT5 2789 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 IGLV7-46A0A075B6I9 117 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 LCE6AA0A183 80 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 LOC101927531A0A1B0GV80 90 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 KRTAP4-16G5E9R7 235 aaPredicted RBP1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 K7EQZ3 153 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 SPRR1BP22528 89 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 KRTAP10-11P60412 298 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 MOBPQ13875 183 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 DEFB116Q30KQ4 102 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 FP248Q71RG6 208 aaPredicted RBP1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 PHF5AQ7RTV0 110 aaKnown RBP1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 SSBP3-AS1Q7Z2R9 100 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 C9orf163Q8N9P6 203 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 Q8NDZ9 215 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 SPTSSBQ8NFR3 76 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 FAM208BQ5VWN6 2430 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 DMXL2Q8TDJ6 3036 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 ATRXP46100 2492 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 DOPEY1Q5JWR5 2465 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 FN1P02751 2386 aaKnown RBP1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 C2CD3Q4AC94 2353 aa1.32□□□□□ -2.2
RNU1-40P-201ENST00000516816 EYSQ5T1H1 3165 aa1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 LRRK2Q5S007 2527 aa1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 TLN2Q9Y4G6 2542 aa1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 LOC400499M0QZD8 3231 aa1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 A0A096LNI7 61 aa1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 IGLV9-49A0A0B4J1Y8 123 aa1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 LOC100996750A0A140TA64 210 aa1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 FAM168BA1KXE4 195 aa1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 PRLHP81277 87 aa1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 ZCCHC13Q8WW36 166 aaKnown RBP1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 MRPL34Q9BQ48 92 aaKnown RBP1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 KRTAP4-6Q9BYQ5 205 aa1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 NCOR2Q9Y618 2525 aa1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 USP9XQ93008 2570 aaPredicted RBP1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 SPTBN4Q9H254 2564 aa1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 WDFY4Q6ZS81 3184 aa1.31□□□□□ -2.2
RNU1-40P-201ENST00000516816 HRNRQ86YZ3 2850 aaPredicted RBP1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 ACACBO00763 2458 aa1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 NAV2Q8IVL1 2488 aa1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 IGHV6-1A0A0B4J1U7 121 aa1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 NBDYA0A0U1RRE5 68 aa1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 A8MUN3 132 aa1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 ZNF861PO60384 105 aa1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 LINC00313P59037 77 aa1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 PRR4Q16378 134 aa1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 C7orf65Q6ZTY9 151 aa1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 Q8N9P0 234 aaPredicted RBP1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 LINC00472Q9H8W2 130 aa1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 C8orf17Q9NRJ1 99 aa1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 APLNQ9ULZ1 77 aa1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 IGF2RP11717 2491 aa1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 CHD6Q8TD26 2715 aa1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 UTP20O75691 2785 aaKnown RBP1.3□□□□□ -2.2
RNU1-40P-201ENST00000516816 MYO9AB2RTY4 2548 aa1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 USP9YO00507 2555 aaPredicted RBP1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 MYO15AQ9UKN7 3530 aa1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 A0A087X002 238 aa1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 A0A1B0GU69 56 aa1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 A0A1B0GVX0 72 aa1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 A0A1W2PNN7 141 aa1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 KRTAP29-1A8MX34 341 aaPredicted RBP1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 PRB2P02812 416 aaPredicted RBP1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 ASB16-AS1Q495Z4 193 aa1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 PCOTHQ58A44 107 aa1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 SPAG11AQ6PDA7 123 aa1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 COA5Q86WW8 74 aa1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 CDC42SE1Q9NRR8 79 aa1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 LINC01558Q9Y6Z2 57 aa1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 CFAP47Q6ZTR5 3102 aa1.29□□□□□ -2.2
RNU1-40P-201ENST00000516816 ADGRG4Q8IZF6 3080 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms