RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 MEIG1Q5JSS6 88 aa1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 TMEM170BQ5T4T1 132 aa1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 ADAMTSL4-AS1Q5T5F5 129 aa1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 LCE1AQ5T7P2 110 aa1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 C2orf48Q96LS8 159 aa1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 OPRPNQ99935 248 aaPredicted RBP1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 TMEM126AQ9H061 195 aa1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 PPDPFQ9H3Y8 114 aa1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 CSDC2Q9Y534 153 aaKnown RBP1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 H7C2G1 150 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 TIMM17BO60830 172 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 MRPS36P82909 103 aaKnown RBP1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 MIAQ16674 131 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 C2orf82Q6UX34 121 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 NTM-AS1Q6ZSK4 140 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 C5orf38Q86SI9 138 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 C20orf203Q8NBC4 194 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 CLEC2BQ92478 149 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 RMI2Q96E14 147 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 TMEM243Q9BU79 118 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 TIMM21Q9BVV7 248 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 KRTAP9-3Q9BYQ3 159 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 CYSTM1Q9H1C7 97 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 SPANXA1Q9NS26 97 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 PRR34Q9NV39 138 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 Q9UF83 564 aa1.94□□□□□ -2.1
SCARNA13-201ENST00000516672 IGHV3-64A0A075B6Q5 118 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 IGLV5-45A0A087WSX0 123 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 FAM236AA0A1B0GUQ0 79 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 FAM236BA0A1B0GV22 79 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 A0A1B0GX51 115 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 IGHV3-30-3P0DP02 117 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 SS18Q15532 418 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 SOSTDC1Q6X4U4 206 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 WFDC10BQ8IUB3 73 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 C3orf22Q8N5N4 141 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 LINC00526Q96FQ7 95 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 TMEM101Q96IK0 257 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 SPRR2FQ96RM1 72 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 CHCHD5Q9BSY4 110 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 IMUPQ9GZP8 106 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 PYGO1Q9Y3Y4 419 aa1.93□□□□□ -2.1
SCARNA13-201ENST00000516672 IGHV1-58A0A0C4DH39 117 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 IGLV5-39A0A0G2JS06 123 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 TINCRA0A1B0GVN0 87 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 UBE2L6O14933 153 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 UQCRQO14949 82 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 NDUFA1O15239 70 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 CXCL5P42830 114 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 HERVK_113P63121 156 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 C14orf177Q52M58 125 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 ENHOQ6UWT2 76 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 FAM19A3Q7Z5A8 133 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 LINC00643Q86TS7 51 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 DAND5Q8N907 189 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 OBSCN-AS1Q96MR7 158 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 FAM218AQ96MZ4 157 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 CDC42SE2Q9NRR3 84 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 NDUFA12Q9UI09 145 aa1.92□□□□□ -2.1
SCARNA13-201ENST00000516672 LOC107984640A0A0U1RRK4 108 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 J3KT08 172 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 COX7A2LO14548 114 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 PSCAO43653 123 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 TRACP01848 142 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 CRPP02741 224 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 ANGP03950 147 aaKnown RBP1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 ACYP1P07311 99 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 COX7CP15954 63 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 RPS28P62857 69 aaKnown RBP1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 REG3AQ06141 175 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 TPRXLQ17RH7 258 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 Q1RN00 199 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 C5orf47Q569G3 176 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 XP32Q5T750 250 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 C9orf153Q5TBE3 101 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 DGAT2L7PQ6IED9 249 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 Q6JHZ5 121 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 LINC00269Q8N2A0 174 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 ZNF625Q96I27 306 aaPredicted RBP1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 C1orf43Q9BWL3 253 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 PSORS1C2Q9UIG4 136 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 KLK12Q9UKR0 248 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 UBE2D4Q9Y2X8 147 aa1.91□□□□□ -2.1
SCARNA13-201ENST00000516672 IGLV4-60A0A075B6I1 120 aa1.9□□□□□ -2.11
SCARNA13-201ENST00000516672 F8WDY8 70 aa1.9□□□□□ -2.11
SCARNA13-201ENST00000516672 NPC2P61916 151 aa1.9□□□□□ -2.11
SCARNA13-201ENST00000516672 COX6A2Q02221 97 aa1.9□□□□□ -2.11
SCARNA13-201ENST00000516672 RNASE13Q5GAN3 156 aaKnown RBP1.9□□□□□ -2.11
SCARNA13-201ENST00000516672 C9orf129Q5T035 196 aaKnown RBP1.9□□□□□ -2.11
SCARNA13-201ENST00000516672 Q5XG85 94 aa1.9□□□□□ -2.11
SCARNA13-201ENST00000516672 KRTAP26-1Q6PEX3 210 aa1.9□□□□□ -2.11
SCARNA13-201ENST00000516672 CD164L2Q6UWJ8 174 aa1.9□□□□□ -2.11
SCARNA13-201ENST00000516672 FAM19A5Q7Z5A7 132 aaPredicted RBP1.9□□□□□ -2.11
SCARNA13-201ENST00000516672 LINC01561Q8N1V8 128 aa1.9□□□□□ -2.11
SCARNA13-201ENST00000516672 LINC00308Q8TCZ7 52 aa1.9□□□□□ -2.11
SCARNA13-201ENST00000516672 KRTAP4-7Q9BYR0 210 aa1.9□□□□□ -2.11
SCARNA13-201ENST00000516672 CDKN2A-AS1Q9UH64 79 aa1.9□□□□□ -2.11
SCARNA13-201ENST00000516672 PKIGQ9Y2B9 76 aa1.9□□□□□ -2.11
SCARNA13-201ENST00000516672 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms