RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 NOP10Q9NPE3 64 aaKnown RBP1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 PRO1854Q9UHT4 67 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 ERG28Q9UKR5 140 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 ACACBO00763 2458 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 DNHD1Q96M86 4753 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 SPG11Q96JI7 2443 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 CR1P17927 2039 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 CSMD2Q7Z408 3487 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.65□□□□□ -2.154e-10■■■■□ 20.9
CALCOCO2-223ENST00000514267 TRAV13-1A0A0B4J241 112 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 IGHV1-58A0A0C4DH39 117 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 A0A0J9YY99 117 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 TMEM262E9PQX1 116 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 H3BMG7 143 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 H3BT86 120 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 IGHV3-30P01768 117 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 COX6CP09669 75 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 IGHV3-30-5P0DP03 117 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 DEFB130BP0DP73 79 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 DEFB130AP0DP74 79 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 KRTAP21-3Q3LHN1 58 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 CRYBG3Q68DQ2 2970 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 Q6ZUT4 128 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 MUSTN1Q8IVN3 82 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 COPS9Q8WXC6 57 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 SMR3AQ99954 134 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 Q9BRP9 147 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 NDUFA12Q9UI09 145 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 UBE2D4Q9Y2X8 147 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 MUC4Q99102 2169 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 COL12A1Q99715 3063 aa1.65□□□□□ -2.15
CALCOCO2-223ENST00000514267 UBR5O95071 2799 aaPredicted RBP1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 POLQO75417 2590 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 CELSR1Q9NYQ6 3014 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 CENPEQ02224 2701 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 TRBV20-1A0A075B6N2 111 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 TRBV10-1A0A0K0K1A3 114 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 A8MTW9 85 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 IGLV1-51P01701 117 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 RPL28P46779 137 aaKnown RBP1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 UBE2D1P51668 147 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 MRPS36P82909 103 aaKnown RBP1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 WFDC2Q14508 124 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 ATXN8Q156A1 80 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 SOSTDC1Q6X4U4 206 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 NDUFA11Q86Y39 141 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 ZNF625Q96I27 306 aaPredicted RBP1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 AMELXQ99217 191 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 WFDC10AQ9H1F0 79 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 TOMM7Q9P0U1 55 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 CDKN2A-AS1Q9UH64 79 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 CSPG4Q6UVK1 2322 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 USP24Q9UPU5 2620 aa1.64□□□□□ -2.15
CALCOCO2-223ENST00000514267 CELSR2Q9HCU4 2923 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 FBN3Q75N90 2809 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 LRRK2Q5S007 2527 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 ZFYVE26Q68DK2 2539 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 DOPEY2Q9Y3R5 2298 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 ZNF469Q96JG9 3925 aaPredicted RBP1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 A0A096LPF7 62 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 TRBV6-4A0A1B0GX49 114 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 NDUFA1O15239 70 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 TCL1BO95988 128 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 IGHV3-33P01772 117 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 IFITM1P13164 125 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 HTN3P15516 51 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 LINC00158P58513 81 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 UBE2D3P61077 147 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 UBE2D2P62837 147 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 COX6A2Q02221 97 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 SS18Q15532 418 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 ETDBQ3ZM63 59 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 Q5XG85 94 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 COX7B2Q8TF08 81 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 CDC42SE2Q9NRR3 84 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 ABCA12Q86UK0 2595 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 CMYA5Q8N3K9 4069 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 TEX15Q9BXT5 2789 aa1.63□□□□□ -2.15
CALCOCO2-223ENST00000514267 FBN2P35556 2912 aa1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 TRBV6-8A0A0A6YYG3 113 aa1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 C3orf84H3BNL1 204 aa1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 DEFB4AO15263 64 aa1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 TIMM17BO60830 172 aa1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 LINC00694P0DN24 101 aa1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 DEFB135Q30KP9 77 aa1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 CLPSL2Q6UWE3 100 aa1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 C2orf82Q6UX34 121 aa1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 C5orf38Q86SI9 138 aa1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 ATP6V0E2Q8NHE4 81 aa1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 LINC00308Q8TCZ7 52 aa1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 PPDPFLQ8WWR9 84 aa1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 SPANXDQ9BXN6 97 aa1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 USP9YO00507 2555 aaPredicted RBP1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 GCN1Q92616 2671 aaKnown RBP1.62□□□□□ -2.15
CALCOCO2-223ENST00000514267 TEP1Q99973 2627 aaKnown RBP1.61□□□□□ -2.15
CALCOCO2-223ENST00000514267 MXRA5Q9NR99 2828 aa1.61□□□□□ -2.15
CALCOCO2-223ENST00000514267 ITPR3Q14573 2671 aa1.61□□□□□ -2.15
CALCOCO2-223ENST00000514267 CUBNO60494 3623 aa1.61□□□□□ -2.15
CALCOCO2-223ENST00000514267 TRAV7A0A075B6U4 112 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms