RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 PKD1L3Q7Z443 1732 aa0.84□□□□□ -2.27
SGCB-203ENST00000514133 SAMD9Q5K651 1589 aa0.84□□□□□ -2.27
SGCB-203ENST00000514133 DMBT1Q9UGM3 2413 aaPredicted RBP0.84□□□□□ -2.27
SGCB-203ENST00000514133 RGPD3A6NKT7 1758 aaPredicted RBP0.84□□□□□ -2.27
SGCB-203ENST00000514133 RGPD4Q7Z3J3 1758 aa0.84□□□□□ -2.27
SGCB-203ENST00000514133 Q6JHZ5 121 aa0.84□□□□□ -2.27
SGCB-203ENST00000514133 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.27
SGCB-203ENST00000514133 PLAC8Q9NZF1 115 aa0.84□□□□□ -2.27
SGCB-203ENST00000514133 PTPN23Q9H3S7 1636 aa0.84□□□□□ -2.28
SGCB-203ENST00000514133 ITSN1Q15811 1721 aa0.84□□□□□ -2.28
SGCB-203ENST00000514133 ANKRD36BQ8N2N9 1353 aa0.83□□□□□ -2.28
SGCB-203ENST00000514133 INO80Q9ULG1 1556 aaPredicted RBP0.83□□□□□ -2.28
SGCB-203ENST00000514133 SPENQ96T58 3664 aaKnown RBP0.83□□□□□ -2.28
SGCB-203ENST00000514133 PAPPAQ13219 1627 aa0.83□□□□□ -2.28
SGCB-203ENST00000514133 ZZEF1O43149 2961 aa0.83□□□□□ -2.28
SGCB-203ENST00000514133 SNHG12Q9BXW3 62 aa0.83□□□□□ -2.28
SGCB-203ENST00000514133 XRN1Q8IZH2 1706 aaKnown RBP0.83□□□□□ -2.28
SGCB-203ENST00000514133 CRYBG1Q9Y4K1 1723 aa0.83□□□□□ -2.28
SGCB-203ENST00000514133 TRPM2O94759 1503 aa0.83□□□□□ -2.28
SGCB-203ENST00000514133 SYCP2Q9BX26 1530 aa0.83□□□□□ -2.28
SGCB-203ENST00000514133 DUOX2Q9NRD8 1548 aa0.83□□□□□ -2.28
SGCB-203ENST00000514133 WNK1Q9H4A3 2382 aa0.83□□□□□ -2.28
SGCB-203ENST00000514133 SCN11AQ9UI33 1791 aa0.83□□□□□ -2.28
SGCB-203ENST00000514133 KIF1AQ12756 1690 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 GCC2Q8IWJ2 1684 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 PRXQ9BXM0 1461 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 PARP4Q9UKK3 1724 aaKnown RBP0.82□□□□□ -2.28
SGCB-203ENST00000514133 A0A0G2JND7 137 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 FAM223BA6NKX1 122 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 ATOX1O00244 68 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 NDUFC1O43677 76 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 KRTAP2-3P0C7H8 128 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 VAMP8Q9BV40 100 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 KRTAP2-4Q9BYR9 128 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 COL7A1Q02388 2944 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 COL14A1Q05707 1796 aaKnown RBP0.82□□□□□ -2.28
SGCB-203ENST00000514133 CHD7Q9P2D1 2997 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 TSC2P49815 1807 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 CACNA1HO95180 2353 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 UBR3Q6ZT12 1888 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 DCHS2Q6V1P9 2916 aa0.82□□□□□ -2.28
SGCB-203ENST00000514133 ALS2Q96Q42 1657 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 HFM1A2PYH4 1435 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 TROQ12816 1431 aaPredicted RBP0.81□□□□□ -2.28
SGCB-203ENST00000514133 EEA1Q15075 1411 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 HMCN2Q8NDA2 5059 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 LY75O60449 1722 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 DOPEY2Q9Y3R5 2298 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 ADGRL2O95490 1459 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 NRXN1Q9ULB1 1477 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 CUBNO60494 3623 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 LAMA5O15230 3695 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 NEXMIFQ5QGS0 1516 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 A0A1B0GWA3 101 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 S100A3P33764 101 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 CACFD1Q9UGQ2 172 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 EIF2AK4Q9P2K8 1649 aaKnown RBP0.81□□□□□ -2.28
SGCB-203ENST00000514133 CSMD2Q7Z408 3487 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 TOGARAM1Q9Y4F4 1720 aa0.81□□□□□ -2.28
SGCB-203ENST00000514133 ATP7BP35670 1465 aa0.8□□□□□ -2.28
SGCB-203ENST00000514133 PLEKHH2Q8IVE3 1493 aa0.8□□□□□ -2.28
SGCB-203ENST00000514133 C10orf142B7Z368 130 aa0.8□□□□□ -2.28
SGCB-203ENST00000514133 SAA2P0DJI9 122 aaPredicted RBP0.8□□□□□ -2.28
SGCB-203ENST00000514133 NHSQ6T4R5 1651 aa0.8□□□□□ -2.28
SGCB-203ENST00000514133 LMO7Q8WWI1 1683 aa0.8□□□□□ -2.28
SGCB-203ENST00000514133 SONP18583 2426 aaKnown RBP0.8□□□□□ -2.28
SGCB-203ENST00000514133 TIAM2Q8IVF5 1701 aa0.8□□□□□ -2.28
SGCB-203ENST00000514133 RGPD2P0DJD1 1756 aa0.8□□□□□ -2.28
SGCB-203ENST00000514133 DMXL2Q8TDJ6 3036 aa0.8□□□□□ -2.28
SGCB-203ENST00000514133 LAMA1P25391 3075 aa0.8□□□□□ -2.28
SGCB-203ENST00000514133 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.8□□□□□ -2.28
SGCB-203ENST00000514133 VPS13CQ709C8 3753 aa0.79□□□□□ -2.28
SGCB-203ENST00000514133 SVEP1Q4LDE5 3571 aa0.79□□□□□ -2.28
SGCB-203ENST00000514133 AHCTF1Q8WYP5 2266 aa0.79□□□□□ -2.28
SGCB-203ENST00000514133 LTN1O94822 1766 aa0.79□□□□□ -2.28
SGCB-203ENST00000514133 APC2O95996 2303 aa0.79□□□□□ -2.28
SGCB-203ENST00000514133 CHD9Q3L8U1 2897 aa0.79□□□□□ -2.28
SGCB-203ENST00000514133 NBASA2RRP1 2371 aa0.79□□□□□ -2.28
SGCB-203ENST00000514133 MGAQ8IWI9 3026 aa0.79□□□□□ -2.28
SGCB-203ENST00000514133 RRBP1Q9P2E9 1410 aaKnown RBP0.79□□□□□ -2.28
SGCB-203ENST00000514133 C5P01031 1676 aa0.78□□□□□ -2.28
SGCB-203ENST00000514133 PPLO60437 1756 aa0.78□□□□□ -2.28
SGCB-203ENST00000514133 MYH4Q9Y623 1939 aa0.78□□□□□ -2.28
SGCB-203ENST00000514133 RNF213Q63HN8 5207 aa0.78□□□□□ -2.28
SGCB-203ENST00000514133 A0A0D9SFI3 127 aa0.78□□□□□ -2.28
SGCB-203ENST00000514133 BCE1O60756 84 aa0.78□□□□□ -2.28
SGCB-203ENST00000514133 FAUP35544 74 aaKnown RBP0.78□□□□□ -2.28
SGCB-203ENST00000514133 KRTAP5-10Q6L8G5 202 aa0.78□□□□□ -2.28
SGCB-203ENST00000514133 TMEM263Q8WUH6 116 aaKnown RBP0.78□□□□□ -2.28
SGCB-203ENST00000514133 SPRR4Q96PI1 79 aa0.78□□□□□ -2.28
SGCB-203ENST00000514133 SPTBN2O15020 2390 aa0.78□□□□□ -2.28
SGCB-203ENST00000514133 CLTCL1P53675 1640 aa0.78□□□□□ -2.29
SGCB-203ENST00000514133 C4BP0C0L5 1744 aa0.78□□□□□ -2.29
SGCB-203ENST00000514133 MON2Q7Z3U7 1717 aa0.78□□□□□ -2.29
SGCB-203ENST00000514133 MUC5ACP98088 5654 aa0.77□□□□□ -2.29
SGCB-203ENST00000514133 ATMQ13315 3056 aa0.77□□□□□ -2.29
SGCB-203ENST00000514133 UQCRHP07919 91 aa0.77□□□□□ -2.29
SGCB-203ENST00000514133 ASIPP42127 132 aa0.77□□□□□ -2.29
SGCB-203ENST00000514133 PMCHL1Q16048 86 aa0.77□□□□□ -2.29
SGCB-203ENST00000514133 SERP2Q8N6R1 65 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms