RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	KANTR	A0A1W2PQU2	76 aa		0.25	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	CEBPZOS	A8MTT3	80 aa		0.25	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	CCL22	O00626	93 aa		0.25	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	H1FX-AS1	Q4G0G2	97 aa		0.25	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	RYR2	Q92736	4967 aa		0.25	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	STAB2	Q8WWQ8	2551 aa		0.25	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	PDZD2	O15018	2839 aa		0.24	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	SON	P18583	2426 aa	Known RBP	0.24	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	LOC730098	B7Z3J9	87 aa		0.24	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	PRM1	P04553	51 aa		0.24	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	GAFA1	Q96PS6	74 aa		0.24	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	TENM2	Q9NT68	2774 aa		0.24	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	FLNC	Q14315	2725 aa		0.24	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	ANKRD11	Q6UB99	2663 aa	Predicted RBP	0.24	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	LRRK2	Q5S007	2527 aa		0.24	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	ABCA13	Q86UQ4	5058 aa		0.24	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	CFAP46	Q8IYW2	2715 aa		0.23	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	RYR3	Q15413	4870 aa		0.23	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	TIAM2	Q8IVF5	1701 aa		0.23	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	GCN1	Q92616	2671 aa	Known RBP	0.23	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	MAP1B	P46821	2468 aa	Known RBP	0.23	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	AKAP13	Q12802	2813 aa		0.23	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	WNK1	Q9H4A3	2382 aa		0.23	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	CCDC18	Q5T9S5	1454 aa		0.22	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	LRRC9	Q6ZRR7	1453 aa		0.22	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	MUC5AC	P98088	5654 aa		0.22	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	TNRC18	O15417	2968 aa	Predicted RBP	0.22	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	MYO18B	Q8IUG5	2567 aa		0.22	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	POLR1A	O95602	1720 aa	Predicted RBP	0.22	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	MXRA5	Q9NR99	2828 aa		0.22	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	CREBBP	Q92793	2442 aa		0.22	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	SSPO	A2VEC9	5147 aa		0.22	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	DCHS2	Q6V1P9	2916 aa		0.22	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	USP9Y	O00507	2555 aa	Predicted RBP	0.22	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	ITPR1	Q14643	2758 aa		0.22	□□□□□ -2.37
CALCOCO2-222	ENST00000514006	HERC1	Q15751	4861 aa		0.21	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	DSP	P15924	2871 aa	Known RBP	0.21	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	HYDIN	Q4G0P3	5121 aa		0.21	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	RPL38	P63173	70 aa	Known RBP	0.21	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	KALRN	O60229	2985 aa		0.21	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	PREX1	Q8TCU6	1659 aa		0.21	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	EPG5	Q9HCE0	2579 aa		0.2	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	TNXB	P22105	4242 aa		0.2	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	FASN	P49327	2511 aa	Known RBP	0.2	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	RGPD8	O14715	1765 aa	Predicted RBP	0.2	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	RGPD5	Q99666	1765 aa		0.2	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	TRAV21	A0A0B4J279	112 aa		0.2	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	HEPN1	Q6WQI6	88 aa		0.2	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	ACAN	P16112	2415 aa		0.19	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	EPPK1	P58107	5090 aa	Known RBP	0.19	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	CNOT1	A5YKK6	2376 aa	Known RBP	0.19	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	CCDC168	Q8NDH2	2452 aa		0.19	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	WFDC9	Q8NEX5	89 aa		0.19	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	S100A13	Q99584	98 aa		0.19	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	HMCN2	Q8NDA2	5059 aa		0.19	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	ZAN	Q9Y493	2812 aa		0.19	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	CELSR3	Q9NYQ7	3312 aa		0.18	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	UTP20	O75691	2785 aa	Known RBP	0.18	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	TG	P01266	2768 aa		0.18	□□□□□ -2.38
CALCOCO2-222	ENST00000514006		A0A0C4DFX4	3053 aa		0.18	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	WDR87	Q6ZQQ6	2873 aa		0.18	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	MGAM2	Q2M2H8	2515 aa		0.18	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	ADIRF	Q15847	76 aa		0.18	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	ST20	Q9HBF5	79 aa		0.18	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	ACACB	O00763	2458 aa		0.18	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	FLNB	O75369	2602 aa	Known RBP	0.17	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	EP300	Q09472	2414 aa	Predicted RBP	0.17	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	COL12A1	Q99715	3063 aa		0.17	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	CDKN2A-AS1	Q9UH64	79 aa		0.17	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	WDFY4	Q6ZS81	3184 aa		0.17	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	NBEAL1	Q6ZS30	2694 aa		0.17	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	PRRC2C	Q9Y520	2896 aa	Known RBP	0.16	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	PRKDC	P78527	4128 aa	Known RBP	0.16	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	NDUFB1	O75438	58 aa		0.16	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	SPRR2D	P22532	72 aa		0.16	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	ITPR2	Q14571	2701 aa		0.16	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	BIRC6	Q9NR09	4857 aa		0.15	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	USH2A	O75445	5202 aa		0.15	□□□□□ -2.38
CALCOCO2-222	ENST00000514006	NBEA	Q8NFP9	2946 aa		0.15	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	REV3L	O60673	3130 aa		0.15	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	URB2	Q14146	1524 aa	Known RBP	0.15	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	SPRR2G	Q9BYE4	73 aa		0.15	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	MUC12	Q9UKN1	5478 aa		0.15	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	LPA	P08519	4548 aa		0.15	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	DIP2B	Q9P265	1576 aa		0.15	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	ZNF831	Q5JPB2	1677 aa		0.14	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	APC2	O95996	2303 aa		0.14	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	TLN1	Q9Y490	2541 aa	Known RBP	0.14	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	CEP295	Q9C0D2	2601 aa		0.14	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	DOT1L	Q8TEK3	1739 aa		0.14	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	HERC2	O95714	4834 aa		0.14	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	KRTAP20-1	Q3LI63	56 aa		0.14	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	LELP1	Q5T871	98 aa		0.14	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	NF1	P21359	2839 aa		0.14	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	NIPBL	Q6KC79	2804 aa	eCLIP	0.14	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	FAT3	Q8TDW7	4589 aa		0.13	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	PIK3C2B	O00750	1634 aa		0.13	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	USP32	Q8NFA0	1604 aa		0.13	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	KNL1	Q8NG31	2342 aa		0.13	□□□□□ -2.39
CALCOCO2-222	ENST00000514006	SPG11	Q96JI7	2443 aa		0.13	□□□□□ -2.39

Retrieved 100 of 20,778 RNA–protein pairs in 131 ms