RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 C20orf78Q9BR46 151 aa1.9□□□□□ -2.11
PDLIM5-218ENST00000513341 PRO0628Q9UI54 55 aa1.9□□□□□ -2.11
PDLIM5-218ENST00000513341 TRBV20OR9-2A0A075B6H5 130 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 TRBV24-1A0A075B6N3 115 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 IGKV2-28A0A075B6P5 120 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 LINC00862A6NCI5 91 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 DLEU1O43261 78 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 PDE6DO43924 150 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 IGKV2D-28P01615 120 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 S100A8P05109 93 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 ZNF345Q14585 488 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 CENPWQ5EE01 88 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 FAM231DQ6ZW35 169 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 FAM19A3Q7Z5A8 133 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 SMIM20Q8N5G0 67 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 SFT2D1Q8WV19 159 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 BORCS7Q96B45 105 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 SIGMAR1Q99720 223 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 HIGD2AQ9BW72 106 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 SPANXCQ9NY87 97 aa1.89□□□□□ -2.11
PDLIM5-218ENST00000513341 A0A0J9YXY3 114 aa1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 KANTRA0A1W2PQU2 76 aa1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 A6NDN8 102 aa1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 A8MWL6 223 aa1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 SMKR1H3BMG3 65 aa1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 M0R378 163 aa1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 IGLV6-57P01721 117 aa1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 IFI27P40305 119 aaPredicted RBP1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 RPL37P61927 97 aaKnown RBP1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 SEC11AP67812 179 aa1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 PMVKQ15126 192 aa1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 C4orf26Q17RF5 130 aa1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 LINC00483Q53H64 154 aa1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 FAM213BQ8TBF2 198 aa1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 VPS25Q9BRG1 176 aa1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 TOMM7Q9P0U1 55 aa1.88□□□□□ -2.11
PDLIM5-218ENST00000513341 A0A1B0GUT8 65 aa1.87□□□□□ -2.11
PDLIM5-218ENST00000513341 FAM240AA0A1B0GVK7 77 aa1.87□□□□□ -2.11
PDLIM5-218ENST00000513341 C20orf202A1L168 122 aa1.87□□□□□ -2.11
PDLIM5-218ENST00000513341 MT2AP02795 61 aa1.87□□□□□ -2.11
PDLIM5-218ENST00000513341 RPL39P62891 51 aaKnown RBP1.87□□□□□ -2.11
PDLIM5-218ENST00000513341 C1orf195Q5TG92 126 aa1.87□□□□□ -2.11
PDLIM5-218ENST00000513341 COMMD7Q86VX2 200 aa1.87□□□□□ -2.11
PDLIM5-218ENST00000513341 TCTE3Q8IZS6 198 aa1.87□□□□□ -2.11
PDLIM5-218ENST00000513341 MANBALQ9NQG1 85 aa1.87□□□□□ -2.11
PDLIM5-218ENST00000513341 MED9Q9NWA0 146 aa1.87□□□□□ -2.11
PDLIM5-218ENST00000513341 A0A1B0GV50 99 aa1.86□□□□□ -2.11
PDLIM5-218ENST00000513341 C9orf92A6NGG3 77 aa1.86□□□□□ -2.11
PDLIM5-218ENST00000513341 RAB5BP61020 215 aa1.86□□□□□ -2.11
PDLIM5-218ENST00000513341 HERVK_113P63121 156 aa1.86□□□□□ -2.11
PDLIM5-218ENST00000513341 IFITM2Q01629 132 aa1.86□□□□□ -2.11
PDLIM5-218ENST00000513341 COX17Q14061 63 aa1.86□□□□□ -2.11
PDLIM5-218ENST00000513341 Q6Q795 121 aa1.86□□□□□ -2.11
PDLIM5-218ENST00000513341 TEX43Q6ZNM6 134 aa1.86□□□□□ -2.11
PDLIM5-218ENST00000513341 AMN1Q8IY45 258 aa1.86□□□□□ -2.11
PDLIM5-218ENST00000513341 SMCR5Q8TEV8 140 aa1.86□□□□□ -2.11
PDLIM5-218ENST00000513341 TMEM141Q96I45 108 aa1.86□□□□□ -2.11
PDLIM5-218ENST00000513341 AMELXQ99217 191 aa1.86□□□□□ -2.11
PDLIM5-218ENST00000513341 LIMD2Q9BT23 127 aa1.86□□□□□ -2.11
PDLIM5-218ENST00000513341 EIF5A2Q9GZV4 153 aaKnown RBP1.86□□□□□ -2.11
PDLIM5-218ENST00000513341 GNG13Q9P2W3 67 aa1.86□□□□□ -2.11
PDLIM5-218ENST00000513341 K7ERU9 68 aa1.85□□□□□ -2.11
PDLIM5-218ENST00000513341 KRTAP2-3P0C7H8 128 aa1.85□□□□□ -2.11
PDLIM5-218ENST00000513341 KRTAP10-10P60014 251 aa1.85□□□□□ -2.11
PDLIM5-218ENST00000513341 MOBPQ13875 183 aa1.85□□□□□ -2.11
PDLIM5-218ENST00000513341 FA2HQ7L5A8 372 aa1.85□□□□□ -2.11
PDLIM5-218ENST00000513341 KRTAP2-4Q9BYR9 128 aa1.85□□□□□ -2.11
PDLIM5-218ENST00000513341 SS18L2Q9UHA2 77 aa1.85□□□□□ -2.11
PDLIM5-218ENST00000513341 HIGD1CA8MV81 97 aa1.84□□□□□ -2.11
PDLIM5-218ENST00000513341 MT1FP04733 61 aa1.84□□□□□ -2.11
PDLIM5-218ENST00000513341 CKS2P33552 79 aa1.84□□□□□ -2.11
PDLIM5-218ENST00000513341 PFN2P35080 140 aa1.84□□□□□ -2.11
PDLIM5-218ENST00000513341 SPRR1AP35321 89 aa1.84□□□□□ -2.11
PDLIM5-218ENST00000513341 AKR1D1P51857 326 aa1.84□□□□□ -2.11
PDLIM5-218ENST00000513341 BATFQ16520 125 aa1.84□□□□□ -2.11
PDLIM5-218ENST00000513341 MRPL51Q4U2R6 128 aaKnown RBP1.84□□□□□ -2.11
PDLIM5-218ENST00000513341 C10orf91Q5T1B1 145 aa1.84□□□□□ -2.11
PDLIM5-218ENST00000513341 FAM104BQ5XKR9 115 aa1.84□□□□□ -2.11
PDLIM5-218ENST00000513341 Q8N9L7 120 aa1.84□□□□□ -2.11
PDLIM5-218ENST00000513341 COX7B2Q8TF08 81 aa1.84□□□□□ -2.11
PDLIM5-218ENST00000513341 C14orf144Q96I85 54 aa1.84□□□□□ -2.11
PDLIM5-218ENST00000513341 SMIM2Q9BVW6 85 aa1.84□□□□□ -2.11
PDLIM5-218ENST00000513341 CDKN2A-AS1Q9UH64 79 aa1.84□□□□□ -2.11
PDLIM5-218ENST00000513341 TMEM250H0YL14 139 aa1.83□□□□□ -2.12
PDLIM5-218ENST00000513341 K7EMI3 77 aa1.83□□□□□ -2.12
PDLIM5-218ENST00000513341 SCO1O75880 301 aa1.83□□□□□ -2.12
PDLIM5-218ENST00000513341 Q5XG85 94 aa1.83□□□□□ -2.12
PDLIM5-218ENST00000513341 ALKAL2Q6UX46 152 aa1.83□□□□□ -2.12
PDLIM5-218ENST00000513341 ATP11AUNQ6ZP68 121 aa1.83□□□□□ -2.12
PDLIM5-218ENST00000513341 KCNQ1DNQ9H478 68 aa1.83□□□□□ -2.12
PDLIM5-218ENST00000513341 SND1-IT1Q9HBX3 110 aa1.83□□□□□ -2.12
PDLIM5-218ENST00000513341 HSPB8Q9UJY1 196 aa1.83□□□□□ -2.12
PDLIM5-218ENST00000513341 TRBV20-1A0A075B6N2 111 aa1.82□□□□□ -2.12
PDLIM5-218ENST00000513341 TRAV9-1A0A075B6T8 112 aa1.82□□□□□ -2.12
PDLIM5-218ENST00000513341 ETDCA0A1B0GVM5 59 aa1.82□□□□□ -2.12
PDLIM5-218ENST00000513341 A0A1B0GX51 115 aa1.82□□□□□ -2.12
PDLIM5-218ENST00000513341 IGIPA6NJ69 53 aa1.82□□□□□ -2.12
PDLIM5-218ENST00000513341 J3KT08 172 aa1.82□□□□□ -2.12
PDLIM5-218ENST00000513341 DDTP30046 118 aa1.82□□□□□ -2.12
PDLIM5-218ENST00000513341 HERVK_113P61574 105 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms