RNA–Protein interactions for RNA: ENST00000512380.1

PDLIM3-208, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 764 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-208ENST00000512380 COL7A1Q02388 2944 aa3.63□□□□□ -1.83
PDLIM3-208ENST00000512380 A0A087WWC5 75 aa3.63□□□□□ -1.83
PDLIM3-208ENST00000512380 C7orf77A4D0Y5 90 aa3.63□□□□□ -1.83
PDLIM3-208ENST00000512380 M0QY20 66 aa3.63□□□□□ -1.83
PDLIM3-208ENST00000512380 APOC3P02656 99 aa3.63□□□□□ -1.83
PDLIM3-208ENST00000512380 CNFNQ9BYD5 112 aa3.63□□□□□ -1.83
PDLIM3-208ENST00000512380 TMEM191AQ9H0A3 160 aa3.63□□□□□ -1.83
PDLIM3-208ENST00000512380 ERG28Q9UKR5 140 aa3.63□□□□□ -1.83
PDLIM3-208ENST00000512380 MUC4Q99102 2169 aa3.63□□□□□ -1.83
PDLIM3-208ENST00000512380 PRKDCP78527 4128 aaKnown RBP3.62□□□□□ -1.83
PDLIM3-208ENST00000512380 IGKV2-24A0A0C4DH68 120 aa3.62□□□□□ -1.83
PDLIM3-208ENST00000512380 K7ERU9 68 aa3.62□□□□□ -1.83
PDLIM3-208ENST00000512380 PPP1R17O96001 155 aa3.62□□□□□ -1.83
PDLIM3-208ENST00000512380 CKS2P33552 79 aa3.62□□□□□ -1.83
PDLIM3-208ENST00000512380 LELP1Q5T871 98 aa3.62□□□□□ -1.83
PDLIM3-208ENST00000512380 MRPL54Q6P161 138 aaKnown RBP3.62□□□□□ -1.83
PDLIM3-208ENST00000512380 TENM3Q9P273 2699 aa3.62□□□□□ -1.83
PDLIM3-208ENST00000512380 ADCYAP1P18509 176 aa3.61□□□□□ -1.83
PDLIM3-208ENST00000512380 UBE2D3P61077 147 aa3.61□□□□□ -1.83
PDLIM3-208ENST00000512380 UBE2D2P62837 147 aa3.61□□□□□ -1.83
PDLIM3-208ENST00000512380 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
PDLIM3-208ENST00000512380 SVBPQ8N300 66 aa3.61□□□□□ -1.83
PDLIM3-208ENST00000512380 DEFB104AQ8WTQ1 72 aa3.61□□□□□ -1.83
PDLIM3-208ENST00000512380 DIRC1Q969H9 104 aa3.61□□□□□ -1.83
PDLIM3-208ENST00000512380 ST20Q9HBF5 79 aa3.61□□□□□ -1.83
PDLIM3-208ENST00000512380 TMEM242Q9NWH2 141 aa3.61□□□□□ -1.83
PDLIM3-208ENST00000512380 PRO2289Q9P1D8 64 aa3.61□□□□□ -1.83
PDLIM3-208ENST00000512380 TRBV6-8A0A0A6YYG3 113 aa3.6□□□□□ -1.83
PDLIM3-208ENST00000512380 NBDYA0A0U1RRE5 68 aa3.6□□□□□ -1.83
PDLIM3-208ENST00000512380 IBA57-AS1B1ANH7 110 aa3.6□□□□□ -1.83
PDLIM3-208ENST00000512380 I3L3M4 83 aa3.6□□□□□ -1.83
PDLIM3-208ENST00000512380 DLEU1O43261 78 aa3.6□□□□□ -1.83
PDLIM3-208ENST00000512380 IGHV3-30P01768 117 aa3.6□□□□□ -1.83
PDLIM3-208ENST00000512380 IGHV3-33P01772 117 aa3.6□□□□□ -1.83
PDLIM3-208ENST00000512380 LINC00694P0DN24 101 aa3.6□□□□□ -1.83
PDLIM3-208ENST00000512380 IGHV3-30-5P0DP03 117 aa3.6□□□□□ -1.83
PDLIM3-208ENST00000512380 C1orf134Q5TEV5 83 aa3.6□□□□□ -1.83
PDLIM3-208ENST00000512380 RPL39LQ96EH5 51 aaKnown RBP3.6□□□□□ -1.83
PDLIM3-208ENST00000512380 C20orf166-AS1Q96NR2 134 aa3.6□□□□□ -1.83
PDLIM3-208ENST00000512380 TRBV25-1A0A075B6N4 114 aa3.59□□□□□ -1.83
PDLIM3-208ENST00000512380 IGHV1-24A0A0C4DH33 117 aa3.59□□□□□ -1.83
PDLIM3-208ENST00000512380 S100A1P23297 94 aa3.59□□□□□ -1.83
PDLIM3-208ENST00000512380 FCER1GP30273 86 aa3.59□□□□□ -1.83
PDLIM3-208ENST00000512380 ELOBQ15370 118 aa3.59□□□□□ -1.83
PDLIM3-208ENST00000512380 SS18Q15532 418 aa3.59□□□□□ -1.83
PDLIM3-208ENST00000512380 WFDC10BQ8IUB3 73 aa3.59□□□□□ -1.83
PDLIM3-208ENST00000512380 TRBV6-5A0A0K0K1A5 114 aa3.58□□□□□ -1.84
PDLIM3-208ENST00000512380 SDHAF1A6NFY7 115 aa3.58□□□□□ -1.84
PDLIM3-208ENST00000512380 D6R8Y8 96 aa3.58□□□□□ -1.84
PDLIM3-208ENST00000512380 NCR2O95944 276 aa3.58□□□□□ -1.84
PDLIM3-208ENST00000512380 PKIAP61925 76 aa3.58□□□□□ -1.84
PDLIM3-208ENST00000512380 C20orf78Q9BR46 151 aa3.58□□□□□ -1.84
PDLIM3-208ENST00000512380 C2orf88Q9BSF0 95 aa3.58□□□□□ -1.84
PDLIM3-208ENST00000512380 SMCO4Q9NRQ5 59 aa3.58□□□□□ -1.84
PDLIM3-208ENST00000512380 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
PDLIM3-208ENST00000512380 ANGP03950 147 aaKnown RBP3.57□□□□□ -1.84
PDLIM3-208ENST00000512380 POLR2KP53803 58 aaKnown RBP3.57□□□□□ -1.84
PDLIM3-208ENST00000512380 MRPS36P82909 103 aaKnown RBP3.57□□□□□ -1.84
PDLIM3-208ENST00000512380 IQCJQ1A5X6 159 aa3.57□□□□□ -1.84
PDLIM3-208ENST00000512380 LINC01556Q5JQF7 62 aa3.57□□□□□ -1.84
PDLIM3-208ENST00000512380 C14orf132Q9NPU4 83 aa3.57□□□□□ -1.84
PDLIM3-208ENST00000512380 STAB2Q8WWQ8 2551 aa3.57□□□□□ -1.84
PDLIM3-208ENST00000512380 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.56□□□□□ -1.84
PDLIM3-208ENST00000512380 UQCRQO14949 82 aa3.56□□□□□ -1.84
PDLIM3-208ENST00000512380 HBDP02042 147 aa3.56□□□□□ -1.84
PDLIM3-208ENST00000512380 BAALC-AS2P0C853 105 aa3.56□□□□□ -1.84
PDLIM3-208ENST00000512380 FABP4P15090 132 aa3.56□□□□□ -1.84
PDLIM3-208ENST00000512380 Q0VG73 95 aa3.56□□□□□ -1.84
PDLIM3-208ENST00000512380 TIMM21Q9BVV7 248 aa3.56□□□□□ -1.84
PDLIM3-208ENST00000512380 TENM2Q9NT68 2774 aa3.55□□□□□ -1.84
PDLIM3-208ENST00000512380 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.55□□□□□ -1.84
PDLIM3-208ENST00000512380 IGKV2D-26A0A0A0MRZ7 120 aa3.55□□□□□ -1.84
PDLIM3-208ENST00000512380 A0A0G2JQZ4 141 aa3.55□□□□□ -1.84
PDLIM3-208ENST00000512380 IGKV2-29A2NJV5 120 aaPredicted RBP3.55□□□□□ -1.84
PDLIM3-208ENST00000512380 CRPP02741 224 aa3.55□□□□□ -1.84
PDLIM3-208ENST00000512380 LINC00269Q8N2A0 174 aa3.55□□□□□ -1.84
PDLIM3-208ENST00000512380 IGKV3OR2-268A0A0C4DH90 116 aa3.54□□□□□ -1.84
PDLIM3-208ENST00000512380 IFI27P40305 119 aaPredicted RBP3.54□□□□□ -1.84
PDLIM3-208ENST00000512380 AKR1D1P51857 326 aa3.54□□□□□ -1.84
PDLIM3-208ENST00000512380 ROMO1P60602 79 aa3.54□□□□□ -1.84
PDLIM3-208ENST00000512380 Q8N814 137 aa3.54□□□□□ -1.84
PDLIM3-208ENST00000512380 Q8N8P6 123 aa3.54□□□□□ -1.84
PDLIM3-208ENST00000512380 C9orf163Q8N9P6 203 aa3.54□□□□□ -1.84
PDLIM3-208ENST00000512380 NXT2Q9NPJ8 142 aaKnown RBP3.54□□□□□ -1.84
PDLIM3-208ENST00000512380 ZNF25P17030 456 aaPredicted RBP3.53□□□□□ -1.84
PDLIM3-208ENST00000512380 CLPSL2Q6UWE3 100 aa3.53□□□□□ -1.84
PDLIM3-208ENST00000512380 ENHOQ6UWT2 76 aa3.53□□□□□ -1.84
PDLIM3-208ENST00000512380 LINC00304Q8N9R0 145 aa3.53□□□□□ -1.84
PDLIM3-208ENST00000512380 SMIM2Q9BVW6 85 aa3.53□□□□□ -1.84
PDLIM3-208ENST00000512380 FAM236AA0A1B0GUQ0 79 aa3.52□□□□□ -1.85
PDLIM3-208ENST00000512380 FAM236BA0A1B0GV22 79 aa3.52□□□□□ -1.85
PDLIM3-208ENST00000512380 hDV103S1A0JD37 113 aa3.52□□□□□ -1.85
PDLIM3-208ENST00000512380 K7EMI3 77 aa3.52□□□□□ -1.85
PDLIM3-208ENST00000512380 KRTAP12-2P59991 146 aa3.52□□□□□ -1.85
PDLIM3-208ENST00000512380 CLEC2BQ92478 149 aa3.52□□□□□ -1.85
PDLIM3-208ENST00000512380 CDC42SE2Q9NRR3 84 aa3.52□□□□□ -1.85
PDLIM3-208ENST00000512380 RPL39P62891 51 aaKnown RBP3.51□□□□□ -1.85
PDLIM3-208ENST00000512380 BAGE3Q86Y29 109 aa3.51□□□□□ -1.85
PDLIM3-208ENST00000512380 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
PDLIM3-208ENST00000512380 CST9LQ9H4G1 147 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms