RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 OXTP01178 125 aa12.06□□□□□ -0.48
SMAD1-211ENST00000512019 CEND1Q8N111 149 aa12.06□□□□□ -0.48
SMAD1-211ENST00000512019 OR13C6PQ8NH95 151 aa12.06□□□□□ -0.48
SMAD1-211ENST00000512019 TMEM126AQ9H061 195 aa12.06□□□□□ -0.48
SMAD1-211ENST00000512019 REG3GQ6UW15 175 aa12.05□□□□□ -0.48
SMAD1-211ENST00000512019 LINC00337Q8N6G1 96 aa12.05□□□□□ -0.48
SMAD1-211ENST00000512019 KCNQ1DNQ9H478 68 aa12.05□□□□□ -0.48
SMAD1-211ENST00000512019 TRAV13-2A0A0B4J235 113 aa12.04□□□□□ -0.48
SMAD1-211ENST00000512019 TMEM238LA0A1B0GVL6 79 aa12.04□□□□□ -0.48
SMAD1-211ENST00000512019 A6NJY4 79 aa12.04□□□□□ -0.48
SMAD1-211ENST00000512019 TRAV23DV6A0A075B6W5 121 aa12.02□□□□□ -0.49
SMAD1-211ENST00000512019 A6NDN8 102 aa12.02□□□□□ -0.49
SMAD1-211ENST00000512019 BCE1O60756 84 aa12.02□□□□□ -0.49
SMAD1-211ENST00000512019 IGLV7-43P04211 117 aa12□□□□□ -0.49
SMAD1-211ENST00000512019 FXYD2P54710 66 aa11.98□□□□□ -0.49
SMAD1-211ENST00000512019 A0A0B4J2C4 111 aa11.97□□□□□ -0.49
SMAD1-211ENST00000512019 ZNF73O43830 326 aaPredicted RBP11.97□□□□□ -0.49
SMAD1-211ENST00000512019 SPRR1AP35321 89 aa11.97□□□□□ -0.49
SMAD1-211ENST00000512019 UBE2AP49459 152 aa11.97□□□□□ -0.49
SMAD1-211ENST00000512019 RAB37Q96AX2 223 aa11.97□□□□□ -0.49
SMAD1-211ENST00000512019 ETDCA0A1B0GVM5 59 aa11.96□□□□□ -0.49
SMAD1-211ENST00000512019 RPL28P46779 137 aaKnown RBP11.96□□□□□ -0.49
SMAD1-211ENST00000512019 FAM19A1Q7Z5A9 133 aa11.96□□□□□ -0.49
SMAD1-211ENST00000512019 CFC1BP0CG36 223 aa11.95□□□□□ -0.5
SMAD1-211ENST00000512019 CFC1P0CG37 223 aa11.95□□□□□ -0.5
SMAD1-211ENST00000512019 CTAG1AP78358 180 aa11.95□□□□□ -0.5
SMAD1-211ENST00000512019 ZNF861PO60384 105 aa11.94□□□□□ -0.5
SMAD1-211ENST00000512019 RPL13AP40429 203 aaKnown RBP11.94□□□□□ -0.5
SMAD1-211ENST00000512019 HINT1P49773 126 aaPredicted RBP11.94□□□□□ -0.5
SMAD1-211ENST00000512019 DIRC1Q969H9 104 aa11.94□□□□□ -0.5
SMAD1-211ENST00000512019 KRTAP4-16G5E9R7 235 aaPredicted RBP11.93□□□□□ -0.5
SMAD1-211ENST00000512019 M0R143 59 aa11.93□□□□□ -0.5
SMAD1-211ENST00000512019 MT1HL1P0DM35 61 aa11.92□□□□□ -0.5
SMAD1-211ENST00000512019 PRLHP81277 87 aa11.92□□□□□ -0.5
SMAD1-211ENST00000512019 SPINK6Q6UWN8 80 aa11.92□□□□□ -0.5
SMAD1-211ENST00000512019 NHP2Q9NX24 153 aaKnown RBP11.92□□□□□ -0.5
SMAD1-211ENST00000512019 H0Y9J4 135 aa11.91□□□□□ -0.5
SMAD1-211ENST00000512019 BVES-AS1Q5T3Y7 98 aa11.91□□□□□ -0.5
SMAD1-211ENST00000512019 KRTAP13-1Q8IUC0 172 aa11.91□□□□□ -0.5
SMAD1-211ENST00000512019 C6orf99Q4VX62 202 aa11.9□□□□□ -0.5
SMAD1-211ENST00000512019 SMIM11BQ8TCY0 68 aa11.9□□□□□ -0.5
SMAD1-211ENST00000512019 B5MCH6 92 aa11.89□□□□□ -0.51
SMAD1-211ENST00000512019 Q6ZRX8 168 aa11.89□□□□□ -0.51
SMAD1-211ENST00000512019 PRO1854Q9UHT4 67 aa11.89□□□□□ -0.51
SMAD1-211ENST00000512019 TRBV7-6A0A0J9YX20 115 aa11.87□□□□□ -0.51
SMAD1-211ENST00000512019 A0A1B0GWB2 263 aa11.87□□□□□ -0.51
SMAD1-211ENST00000512019 H7C2G1 150 aa11.87□□□□□ -0.51
SMAD1-211ENST00000512019 COX7BP24311 80 aa11.86□□□□□ -0.51
SMAD1-211ENST00000512019 Q1RN00 199 aa11.86□□□□□ -0.51
SMAD1-211ENST00000512019 K7ERJ3 54 aa11.85□□□□□ -0.51
SMAD1-211ENST00000512019 ELOF1P60002 83 aaKnown RBP11.85□□□□□ -0.51
SMAD1-211ENST00000512019 HIGD2AQ9BW72 106 aa11.85□□□□□ -0.51
SMAD1-211ENST00000512019 VAMP3Q15836 100 aa11.84□□□□□ -0.51
SMAD1-211ENST00000512019 TNXBP22105 4242 aa11.83□□□□□ -0.52
SMAD1-211ENST00000512019 SMCR5Q8TEV8 140 aa11.81□□□□□ -0.52
SMAD1-211ENST00000512019 DHRS4-AS1Q9P1J3 65 aa11.81□□□□□ -0.52
SMAD1-211ENST00000512019 Q9BRP9 147 aa11.8□□□□□ -0.52
SMAD1-211ENST00000512019 BATFQ16520 125 aa11.78□□□□□ -0.52
SMAD1-211ENST00000512019 ZNF706Q9Y5V0 76 aaPredicted RBP11.78□□□□□ -0.52
SMAD1-211ENST00000512019 TSPAN13O95857 204 aa11.76□□□□□ -0.53
SMAD1-211ENST00000512019 SLC25A20O43772 301 aa11.75□□□□□ -0.53
SMAD1-211ENST00000512019 PSMB2P49721 201 aa11.74□□□□□ -0.53
SMAD1-211ENST00000512019 LRP2P98164 4655 aa11.74□□□□□ -0.53
SMAD1-211ENST00000512019 H0YGX0 51 aa11.73□□□□□ -0.53
SMAD1-211ENST00000512019 TRIAP1O43715 76 aa11.73□□□□□ -0.53
SMAD1-211ENST00000512019 ERC2-IT1O76042 136 aa11.73□□□□□ -0.53
SMAD1-211ENST00000512019 PCP4L1A6NKN8 68 aa11.72□□□□□ -0.53
SMAD1-211ENST00000512019 LINC00575Q6W349 94 aa11.72□□□□□ -0.53
SMAD1-211ENST00000512019 COX6CP09669 75 aa11.71□□□□□ -0.53
SMAD1-211ENST00000512019 SPRR4Q96PI1 79 aa11.71□□□□□ -0.53
SMAD1-211ENST00000512019 KRTAP1-4P0C5Y4 121 aa11.7□□□□□ -0.54
SMAD1-211ENST00000512019 SNCGO76070 127 aa11.69□□□□□ -0.54
SMAD1-211ENST00000512019 hADV29S1A0JD25 119 aa11.68□□□□□ -0.54
SMAD1-211ENST00000512019 LINC01600Q96MT4 127 aa11.67□□□□□ -0.54
SMAD1-211ENST00000512019 RNF213Q63HN8 5207 aa11.66□□□□□ -0.54
SMAD1-211ENST00000512019 FAM229BQ4G0N7 80 aa11.66□□□□□ -0.54
SMAD1-211ENST00000512019 GAGE2AQ6NT46 116 aa11.66□□□□□ -0.54
SMAD1-211ENST00000512019 SNHG12Q9BXW3 62 aa11.66□□□□□ -0.54
SMAD1-211ENST00000512019 LINC00483Q53H64 154 aa11.65□□□□□ -0.54
SMAD1-211ENST00000512019 ST20-AS1Q8NBB2 130 aa11.65□□□□□ -0.54
SMAD1-211ENST00000512019 A0A1B0GX51 115 aa11.64□□□□□ -0.55
SMAD1-211ENST00000512019 SCGB1C2P0DMR2 95 aa11.64□□□□□ -0.55
SMAD1-211ENST00000512019 CRYGAP11844 174 aa11.63□□□□□ -0.55
SMAD1-211ENST00000512019 ANAPC11Q9NYG5 84 aa11.63□□□□□ -0.55
SMAD1-211ENST00000512019 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.62□□□□□ -0.55
SMAD1-211ENST00000512019 FAM218AQ96MZ4 157 aa11.62□□□□□ -0.55
SMAD1-211ENST00000512019 LYRM7Q5U5X0 104 aa11.61□□□□□ -0.55
SMAD1-211ENST00000512019 Q6ZQY7 126 aa11.61□□□□□ -0.55
SMAD1-211ENST00000512019 CLEC2BQ92478 149 aa11.61□□□□□ -0.55
SMAD1-211ENST00000512019 COL5A1-AS1Q5SY13 56 aa11.6□□□□□ -0.55
SMAD1-211ENST00000512019 PRR26Q8N8Z3 221 aa11.6□□□□□ -0.55
SMAD1-211ENST00000512019 DEFB105AQ8NG35 78 aa11.6□□□□□ -0.55
SMAD1-211ENST00000512019 NAA38Q9BRA0 125 aaKnown RBP11.6□□□□□ -0.55
SMAD1-211ENST00000512019 IGLV5-48A0A075B6I7 105 aa11.59□□□□□ -0.55
SMAD1-211ENST00000512019 A0A087X002 238 aa11.59□□□□□ -0.55
SMAD1-211ENST00000512019 TEX49A0A1B0GTD5 131 aa11.59□□□□□ -0.55
SMAD1-211ENST00000512019 SPRR1BP22528 89 aa11.59□□□□□ -0.55
SMAD1-211ENST00000512019 KRTAP10-8P60410 259 aa11.59□□□□□ -0.55
SMAD1-211ENST00000512019 TAX1BP3O14907 124 aa11.58□□□□□ -0.56
SMAD1-211ENST00000512019 C9orf118A6NHY6 69 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms