RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 H0YGX0 51 aa1.45□□□□□ -2.18
CALCOCO2-220ENST00000511816 I3L2K1 104 aa1.45□□□□□ -2.18
CALCOCO2-220ENST00000511816 K7EQZ3 153 aa1.44□□□□□ -2.18
CALCOCO2-220ENST00000511816 LYNX1P0DP58 116 aa1.44□□□□□ -2.18
CALCOCO2-220ENST00000511816 DEFB123Q8N688 67 aa1.44□□□□□ -2.18
CALCOCO2-220ENST00000511816 MRPL34Q9BQ48 92 aaKnown RBP1.44□□□□□ -2.18
CALCOCO2-220ENST00000511816 ASXL3Q9C0F0 2248 aa1.44□□□□□ -2.18
CALCOCO2-220ENST00000511816 NFAT5O94916 1531 aa1.44□□□□□ -2.18
CALCOCO2-220ENST00000511816 LINC01546A6NGU7 62 aa1.43□□□□□ -2.18
CALCOCO2-220ENST00000511816 CRIP1P50238 77 aa1.43□□□□□ -2.18
CALCOCO2-220ENST00000511816 CNFNQ9BYD5 112 aa1.43□□□□□ -2.18
CALCOCO2-220ENST00000511816 DDX60Q8IY21 1712 aaKnown RBP1.43□□□□□ -2.18
CALCOCO2-220ENST00000511816 OTOGLQ3ZCN5 2332 aa1.43□□□□□ -2.18
CALCOCO2-220ENST00000511816 TECTAO75443 2155 aa1.42□□□□□ -2.18
CALCOCO2-220ENST00000511816 ATP7AQ04656 1500 aa1.42□□□□□ -2.18
CALCOCO2-220ENST00000511816 CCL22O00626 93 aa1.42□□□□□ -2.18
CALCOCO2-220ENST00000511816 SPINK4O60575 86 aa1.42□□□□□ -2.18
CALCOCO2-220ENST00000511816 CDKN2A-AS1Q9UH64 79 aa1.42□□□□□ -2.18
CALCOCO2-220ENST00000511816 CDC42BPAQ5VT25 1732 aa1.42□□□□□ -2.18
CALCOCO2-220ENST00000511816 TNCP24821 2201 aa1.42□□□□□ -2.18
CALCOCO2-220ENST00000511816 C4AP0C0L4 1744 aa1.41□□□□□ -2.18
CALCOCO2-220ENST00000511816 C4BP0C0L5 1744 aa1.41□□□□□ -2.18
CALCOCO2-220ENST00000511816 NDUFA3O95167 84 aa1.41□□□□□ -2.18
CALCOCO2-220ENST00000511816 COX6B2Q6YFQ2 88 aa1.41□□□□□ -2.18
CALCOCO2-220ENST00000511816 PRO0255Q9UI72 69 aa1.41□□□□□ -2.18
CALCOCO2-220ENST00000511816 IQGAP1P46940 1657 aa1.4□□□□□ -2.19
CALCOCO2-220ENST00000511816 LINC00158P58513 81 aa1.4□□□□□ -2.19
CALCOCO2-220ENST00000511816 SPINK9Q5DT21 86 aa1.4□□□□□ -2.19
CALCOCO2-220ENST00000511816 Q8IZM0 81 aa1.4□□□□□ -2.19
CALCOCO2-220ENST00000511816 ZDBF2Q9HCK1 2354 aa1.4□□□□□ -2.19
CALCOCO2-220ENST00000511816 COX6A2Q02221 97 aa1.39□□□□□ -2.19
CALCOCO2-220ENST00000511816 TMEM167BQ9NRX6 74 aa1.39□□□□□ -2.19
CALCOCO2-220ENST00000511816 JMJD1CQ15652 2540 aa1.39□□□□□ -2.19
CALCOCO2-220ENST00000511816 CNTRLQ7Z7A1 2325 aa1.39□□□□□ -2.19
CALCOCO2-220ENST00000511816 URB1O60287 2271 aaKnown RBP1.38□□□□□ -2.19
CALCOCO2-220ENST00000511816 KIF21BO75037 1637 aa1.38□□□□□ -2.19
CALCOCO2-220ENST00000511816 PRO3102Q9H379 93 aa1.38□□□□□ -2.19
CALCOCO2-220ENST00000511816 FLG2Q5D862 2391 aaPredicted RBP1.38□□□□□ -2.19
CALCOCO2-220ENST00000511816 SAMD9LQ8IVG5 1584 aa1.38□□□□□ -2.19
CALCOCO2-220ENST00000511816 KNTC1P50748 2209 aa1.36□□□□□ -2.19
CALCOCO2-220ENST00000511816 LMO7Q8WWI1 1683 aa1.36□□□□□ -2.19
CALCOCO2-220ENST00000511816 Q6ZSA8 131 aa1.36□□□□□ -2.19
CALCOCO2-220ENST00000511816 LINC00308Q8TCZ7 52 aa1.36□□□□□ -2.19
CALCOCO2-220ENST00000511816 C10orf95Q9H7T3 257 aa1.36□□□□□ -2.19
CALCOCO2-220ENST00000511816 FAM208BQ5VWN6 2430 aa1.36□□□□□ -2.19
CALCOCO2-220ENST00000511816 CACNA1EQ15878 2313 aa1.35□□□□□ -2.19
CALCOCO2-220ENST00000511816 NAV3Q8IVL0 2385 aa1.35□□□□□ -2.19
CALCOCO2-220ENST00000511816 AHCTF1Q8WYP5 2266 aa1.35□□□□□ -2.19
CALCOCO2-220ENST00000511816 MINOS1Q5TGZ0 78 aa1.35□□□□□ -2.19
CALCOCO2-220ENST00000511816 RP1L1Q8IWN7 2480 aaPredicted RBP1.35□□□□□ -2.19
CALCOCO2-220ENST00000511816 LOC730098B7Z3J9 87 aa1.34□□□□□ -2.19
CALCOCO2-220ENST00000511816 LYNX1G3V0Z9 82 aa1.34□□□□□ -2.19
CALCOCO2-220ENST00000511816 SNRPGP62308 76 aaKnown RBP1.34□□□□□ -2.19
CALCOCO2-220ENST00000511816 PIEZO2Q9H5I5 2752 aa1.34□□□□□ -2.2
CALCOCO2-220ENST00000511816 BPTFQ12830 3046 aa1.34□□□□□ -2.2
CALCOCO2-220ENST00000511816 GOLGA4Q13439 2230 aaKnown RBP1.34□□□□□ -2.2
CALCOCO2-220ENST00000511816 APLNQ9ULZ1 77 aa1.33□□□□□ -2.2
CALCOCO2-220ENST00000511816 H0YAA0 97 aa1.32□□□□□ -2.2
CALCOCO2-220ENST00000511816 PRB3Q04118 309 aaPredicted RBP1.32□□□□□ -2.2
CALCOCO2-220ENST00000511816 Q5VSD8 79 aa1.32□□□□□ -2.2
CALCOCO2-220ENST00000511816 CRCT1Q9UGL9 99 aa1.32□□□□□ -2.2
CALCOCO2-220ENST00000511816 MROH2BQ7Z745 1585 aa1.32□□□□□ -2.2
CALCOCO2-220ENST00000511816 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.32□□□□□ -2.24e-10■■■■□ 20.9
CALCOCO2-220ENST00000511816 LELP1Q5T871 98 aa1.31□□□□□ -2.2
CALCOCO2-220ENST00000511816 C6orf48Q9UBA6 75 aa1.31□□□□□ -2.2
CALCOCO2-220ENST00000511816 SPRR1AP35321 89 aa1.3□□□□□ -2.2
CALCOCO2-220ENST00000511816 H1FX-AS1Q4G0G2 97 aa1.3□□□□□ -2.2
CALCOCO2-220ENST00000511816 DEFB105AQ8NG35 78 aa1.3□□□□□ -2.2
CALCOCO2-220ENST00000511816 A0A0D9SG42 100 aa1.29□□□□□ -2.2
CALCOCO2-220ENST00000511816 IAPPP10997 89 aa1.29□□□□□ -2.2
CALCOCO2-220ENST00000511816 TFF3Q07654 80 aa1.29□□□□□ -2.2
CALCOCO2-220ENST00000511816 CNOT1A5YKK6 2376 aaKnown RBP1.29□□□□□ -2.2
CALCOCO2-220ENST00000511816 HELZ2Q9BYK8 2649 aaKnown RBP1.28□□□□□ -2.2
CALCOCO2-220ENST00000511816 WFDC13Q8IUB5 93 aa1.28□□□□□ -2.2
CALCOCO2-220ENST00000511816 SMIM2Q9BVW6 85 aa1.28□□□□□ -2.2
CALCOCO2-220ENST00000511816 DUOX1Q9NRD9 1551 aa1.28□□□□□ -2.2
CALCOCO2-220ENST00000511816 SPRR1BP22528 89 aa1.27□□□□□ -2.21
CALCOCO2-220ENST00000511816 FCGBPQ9Y6R7 5405 aaPredicted RBP1.26□□□□□ -2.21
CALCOCO2-220ENST00000511816 ASH1LQ9NR48 2969 aaKnown RBP1.26□□□□□ -2.21
CALCOCO2-220ENST00000511816 NDUFA1O15239 70 aa1.25□□□□□ -2.21
CALCOCO2-220ENST00000511816 DEFB130BP0DP73 79 aa1.25□□□□□ -2.21
CALCOCO2-220ENST00000511816 DEFB130AP0DP74 79 aa1.25□□□□□ -2.21
CALCOCO2-220ENST00000511816 KRTAP4-1Q9BYQ7 146 aa1.25□□□□□ -2.21
CALCOCO2-220ENST00000511816 GCC2Q8IWJ2 1684 aa1.25□□□□□ -2.21
CALCOCO2-220ENST00000511816 KLK9Q2XQG4 91 aa1.23□□□□□ -2.21
CALCOCO2-220ENST00000511816 COL6A6A6NMZ7 2263 aa1.22□□□□□ -2.21
CALCOCO2-220ENST00000511816 RPS27P42677 84 aaKnown RBP1.22□□□□□ -2.21
CALCOCO2-220ENST00000511816 RPS27LQ71UM5 84 aaKnown RBP1.22□□□□□ -2.21
CALCOCO2-220ENST00000511816 DOPEY2Q9Y3R5 2298 aa1.22□□□□□ -2.21
CALCOCO2-220ENST00000511816 CLTCL1P53675 1640 aa1.21□□□□□ -2.22
CALCOCO2-220ENST00000511816 ROS1P08922 2347 aa1.21□□□□□ -2.22
CALCOCO2-220ENST00000511816 ALMS1Q8TCU4 4167 aa1.2□□□□□ -2.22
CALCOCO2-220ENST00000511816 FBN3Q75N90 2809 aa1.2□□□□□ -2.22
CALCOCO2-220ENST00000511816 WFDC10BQ8IUB3 73 aa1.2□□□□□ -2.22
CALCOCO2-220ENST00000511816 PTPRQQ9UMZ3 2332 aa1.2□□□□□ -2.22
CALCOCO2-220ENST00000511816 KRTAP10-4P60372 401 aaPredicted RBP1.19□□□□□ -2.22
CALCOCO2-220ENST00000511816 PTPRZ1P23471 2315 aaPredicted RBP1.18□□□□□ -2.22
CALCOCO2-220ENST00000511816 WT1-ASQ06250 92 aa1.18□□□□□ -2.22
CALCOCO2-220ENST00000511816 PLCE1Q9P212 2302 aa1.18□□□□□ -2.22
CALCOCO2-220ENST00000511816 ZNF462Q96JM2 2506 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms