RNA–Protein interactions for RNA: ENST00000511016.1

ATR-205, Transcript of ATR serine/threonine kinase, humanhuman

TSL 4

Gene ATR, Length 681 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-205ENST00000511016 TEX261Q6UWH6 196 aa0.92□□□□□ -2.26
ATR-205ENST00000511016 BOD1L2Q8IYS8 172 aa0.92□□□□□ -2.26
ATR-205ENST00000511016 HIST1H2BAQ96A08 127 aa0.92□□□□□ -2.26
ATR-205ENST00000511016 Q96NJ1 140 aa0.92□□□□□ -2.26
ATR-205ENST00000511016 PRO2289Q9P1D8 64 aa0.92□□□□□ -2.26
ATR-205ENST00000511016 LSM5Q9Y4Y9 91 aaKnown RBP0.92□□□□□ -2.26
ATR-205ENST00000511016 TRBV27A0A0K0K1C4 114 aa0.91□□□□□ -2.26
ATR-205ENST00000511016 HMGB3O15347 200 aaKnown RBP0.91□□□□□ -2.26
ATR-205ENST00000511016 ZNF73O43830 326 aaPredicted RBP0.91□□□□□ -2.26
ATR-205ENST00000511016 GCHFRP30047 84 aa0.91□□□□□ -2.26
ATR-205ENST00000511016 POLR2KP53803 58 aaKnown RBP0.91□□□□□ -2.26
ATR-205ENST00000511016 AP3S2P59780 193 aa0.91□□□□□ -2.26
ATR-205ENST00000511016 HBBP68871 147 aa0.91□□□□□ -2.26
ATR-205ENST00000511016 LUZP6Q538Z0 58 aa0.91□□□□□ -2.26
ATR-205ENST00000511016 MCFD2Q8NI22 146 aa0.91□□□□□ -2.26
ATR-205ENST00000511016 SMIM4Q8WVI0 70 aa0.91□□□□□ -2.26
ATR-205ENST00000511016 VCX3BQ9H321 246 aa0.91□□□□□ -2.26
ATR-205ENST00000511016 ST20Q9HBF5 79 aa0.91□□□□□ -2.26
ATR-205ENST00000511016 TMEM167BQ9NRX6 74 aa0.91□□□□□ -2.26
ATR-205ENST00000511016 SPANXB1Q9NS25 103 aaPredicted RBP0.91□□□□□ -2.26
ATR-205ENST00000511016 TRAV9-1A0A075B6T8 112 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 FAM236AA0A1B0GUQ0 79 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 FAM236BA0A1B0GV22 79 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 A0A1W2PNM2 257 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 A8MWL6 223 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 F2Z2F3 143 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 PSPHP1O15172 72 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 ATP5HO75947 161 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 TCL1BO95988 128 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 FCER1GP30273 86 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 DEFA1P59665 94 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 RAB5BP61020 215 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 GNGT1P63211 74 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 MT1XP80297 61 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 MRPS36P82909 103 aaKnown RBP0.9□□□□□ -2.27
ATR-205ENST00000511016 ALKAL2Q6UX46 152 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 ZNF625Q96I27 306 aaPredicted RBP0.9□□□□□ -2.27
ATR-205ENST00000511016 NKX6-2Q9C056 277 aaPredicted RBP0.9□□□□□ -2.27
ATR-205ENST00000511016 KCNQ1DNQ9H478 68 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 SPANXA1Q9NS26 97 aa0.9□□□□□ -2.27
ATR-205ENST00000511016 FAM240AA0A1B0GVK7 77 aa0.89□□□□□ -2.27
ATR-205ENST00000511016 A0A1B0GXF2 115 aa0.89□□□□□ -2.27
ATR-205ENST00000511016 INMT-MINDY4F8WBC2 141 aa0.89□□□□□ -2.27
ATR-205ENST00000511016 CXorf1O96002 111 aa0.89□□□□□ -2.27
ATR-205ENST00000511016 PET100P0DJ07 73 aa0.89□□□□□ -2.27
ATR-205ENST00000511016 FAUP35544 74 aaKnown RBP0.89□□□□□ -2.27
ATR-205ENST00000511016 CEBPGP53567 150 aa0.89□□□□□ -2.27
ATR-205ENST00000511016 NDUFA6P56556 154 aa0.89□□□□□ -2.27
ATR-205ENST00000511016 RAB14P61106 215 aa0.89□□□□□ -2.27
ATR-205ENST00000511016 STOML3Q8TAV4 291 aa0.89□□□□□ -2.27
ATR-205ENST00000511016 Q9BRP9 147 aa0.89□□□□□ -2.27
ATR-205ENST00000511016 CYSTM1Q9H1C7 97 aa0.89□□□□□ -2.27
ATR-205ENST00000511016 PRO1933Q9H354 126 aa0.89□□□□□ -2.27
ATR-205ENST00000511016 SND1-IT1Q9HBX3 110 aa0.89□□□□□ -2.27
ATR-205ENST00000511016 LAMTOR3Q9UHA4 124 aa0.89□□□□□ -2.27
ATR-205ENST00000511016 SYNE1Q8NF91 8797 aaKnown RBP0.89□□□□□ -2.27
ATR-205ENST00000511016 TINCRA0A1B0GVN0 87 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 TCAPO15273 167 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 SPRR1BP22528 89 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 AKR1C3P42330 323 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 AQP4P55087 323 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 VBP1P61758 197 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 RPL39P62891 51 aaKnown RBP0.88□□□□□ -2.27
ATR-205ENST00000511016 C4orf26Q17RF5 130 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 PDZD11Q5EBL8 140 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 Q6ZRX8 168 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 SMIM15Q7Z3B0 74 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 KRTAP19-3Q7Z4W3 81 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 BAGE2Q86Y30 109 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 C9orf62Q8N4C0 152 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 SCGB1C1Q8TD33 95 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 TCEAL7Q9BRU2 100 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 CNFNQ9BYD5 112 aa0.88□□□□□ -2.27
ATR-205ENST00000511016 IGHV6-1A0A0B4J1U7 121 aa0.87□□□□□ -2.27
ATR-205ENST00000511016 TMEM250H0YL14 139 aa0.87□□□□□ -2.27
ATR-205ENST00000511016 SIX6O95475 246 aa0.87□□□□□ -2.27
ATR-205ENST00000511016 IFI27P40305 119 aaPredicted RBP0.87□□□□□ -2.27
ATR-205ENST00000511016 AKR1D1P51857 326 aa0.87□□□□□ -2.27
ATR-205ENST00000511016 LSM3P62310 102 aaKnown RBP0.87□□□□□ -2.27
ATR-205ENST00000511016 S100A12P80511 92 aa0.87□□□□□ -2.27
ATR-205ENST00000511016 ENKURQ8TC29 256 aa0.87□□□□□ -2.27
ATR-205ENST00000511016 CNBD2Q96M20 576 aa0.87□□□□□ -2.27
ATR-205ENST00000511016 TMEM191AQ9H0A3 160 aa0.87□□□□□ -2.27
ATR-205ENST00000511016 SMIM26A0A096LP01 95 aa0.86□□□□□ -2.27
ATR-205ENST00000511016 TRBV10-3A0A0K0K1G6 114 aa0.86□□□□□ -2.27
ATR-205ENST00000511016 C8orf87E5RJ46 101 aa0.86□□□□□ -2.27
ATR-205ENST00000511016 SSNA1O43805 119 aa0.86□□□□□ -2.27
ATR-205ENST00000511016 NDUFS5O43920 106 aa0.86□□□□□ -2.27
ATR-205ENST00000511016 NDUFB6O95139 128 aa0.86□□□□□ -2.27
ATR-205ENST00000511016 JOSD1Q15040 202 aaPredicted RBP0.86□□□□□ -2.27
ATR-205ENST00000511016 COX7B2Q8TF08 81 aa0.86□□□□□ -2.27
ATR-205ENST00000511016 SMIM12Q96EX1 92 aa0.86□□□□□ -2.27
ATR-205ENST00000511016 TMEM141Q96I45 108 aa0.86□□□□□ -2.27
ATR-205ENST00000511016 AMELXQ99217 191 aa0.86□□□□□ -2.27
ATR-205ENST00000511016 C2orf88Q9BSF0 95 aa0.86□□□□□ -2.27
ATR-205ENST00000511016 CDKN2A-AS1Q9UH64 79 aa0.86□□□□□ -2.27
ATR-205ENST00000511016 PRO0628Q9UI54 55 aa0.86□□□□□ -2.27
ATR-205ENST00000511016 PPP1R17O96001 155 aa0.85□□□□□ -2.27
ATR-205ENST00000511016 DDTP30046 118 aa0.85□□□□□ -2.27
ATR-205ENST00000511016 H2BFSP57053 126 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms