RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 LRBAP50851 2863 aa1.96□□□□□ -2.09
NUP54-209ENST00000510569 FLNBO75369 2602 aaKnown RBP1.96□□□□□ -2.1
NUP54-209ENST00000510569 COL6A6A6NMZ7 2263 aa1.96□□□□□ -2.1
NUP54-209ENST00000510569 TEX49A0A1B0GTD5 131 aa1.96□□□□□ -2.1
NUP54-209ENST00000510569 CHKB-CPT1BH3BT56 60 aa1.96□□□□□ -2.1
NUP54-209ENST00000510569 ELOF1P60002 83 aaKnown RBP1.96□□□□□ -2.1
NUP54-209ENST00000510569 PRCDQ00LT1 54 aa1.96□□□□□ -2.1
NUP54-209ENST00000510569 KLK9Q2XQG4 91 aa1.96□□□□□ -2.1
NUP54-209ENST00000510569 C1orf137Q5JT78 98 aa1.96□□□□□ -2.1
NUP54-209ENST00000510569 GDF5OSQ5U4N7 250 aa1.96□□□□□ -2.1
NUP54-209ENST00000510569 C9orf163Q8N9P6 203 aa1.96□□□□□ -2.1
NUP54-209ENST00000510569 C4orf3Q8WVX3 66 aa1.96□□□□□ -2.1
NUP54-209ENST00000510569 NDUFA4L2Q9NRX3 87 aa1.96□□□□□ -2.1
NUP54-209ENST00000510569 TMEM167BQ9NRX6 74 aa1.96□□□□□ -2.1
NUP54-209ENST00000510569 PRO2289Q9P1D8 64 aa1.96□□□□□ -2.1
NUP54-209ENST00000510569 KLK9Q9UKQ9 250 aa1.96□□□□□ -2.1
NUP54-209ENST00000510569 ZGRF1Q86YA3 2104 aa1.96□□□□□ -2.1
NUP54-209ENST00000510569 CENPEQ02224 2701 aa1.95□□□□□ -2.1
NUP54-209ENST00000510569 MYMXA0A1B0GTQ4 84 aa1.95□□□□□ -2.1
NUP54-209ENST00000510569 LOC101927531A0A1B0GV80 90 aa1.95□□□□□ -2.1
NUP54-209ENST00000510569 LINC01546A6NGU7 62 aa1.95□□□□□ -2.1
NUP54-209ENST00000510569 F8WEM9 126 aa1.95□□□□□ -2.1
NUP54-209ENST00000510569 C3orf79P0CE67 100 aa1.95□□□□□ -2.1
NUP54-209ENST00000510569 SAA2P0DJI9 122 aaPredicted RBP1.95□□□□□ -2.1
NUP54-209ENST00000510569 PLGLAQ15195 96 aa1.95□□□□□ -2.1
NUP54-209ENST00000510569 RPL39P5Q59GN2 51 aa1.95□□□□□ -2.1
NUP54-209ENST00000510569 C20orf197Q8N268 126 aa1.95□□□□□ -2.1
NUP54-209ENST00000510569 GAFA1Q96PS6 74 aa1.95□□□□□ -2.1
NUP54-209ENST00000510569 LENEPQ9Y5L5 61 aa1.95□□□□□ -2.1
NUP54-209ENST00000510569 R4GN34 69 aa1.95□□□□□ -2.1
NUP54-209ENST00000510569 UNC79Q9P2D8 2635 aa1.95□□□□□ -2.1
NUP54-209ENST00000510569 ABCA4P78363 2273 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 WNK2Q9Y3S1 2297 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 COL12A1Q99715 3063 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 NUPR2A6NF83 97 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 ZNF815PA8K554 130 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 HIGD1CA8MV81 97 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 TFF1P04155 84 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 WT1-ASQ06250 92 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 ATP5EP2Q5VTU8 51 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 CSAG1Q6PB30 78 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 Q6ZTI0 123 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 TMEM167AQ8TBQ9 72 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 MRPL36Q9P0J6 103 aaKnown RBP1.94□□□□□ -2.1
NUP54-209ENST00000510569 TMEM14CQ9P0S9 112 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 KAAG1Q9UBP8 84 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 CELSR2Q9HCU4 2923 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 RELNP78509 3460 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 CRYBG3Q68DQ2 2970 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 NAV2Q8IVL1 2488 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 PDZD2O15018 2839 aa1.94□□□□□ -2.1
NUP54-209ENST00000510569 USP9XQ93008 2570 aaPredicted RBP1.94□□□□□ -2.1
NUP54-209ENST00000510569 AKAP9Q99996 3911 aa1.93□□□□□ -2.1
NUP54-209ENST00000510569 USP9YO00507 2555 aaPredicted RBP1.93□□□□□ -2.1
NUP54-209ENST00000510569 A0A0J9YY99 117 aa1.93□□□□□ -2.1
NUP54-209ENST00000510569 CNBPP62633 177 aaKnown RBP1.93□□□□□ -2.1
NUP54-209ENST00000510569 SPINK9Q5DT21 86 aa1.93□□□□□ -2.1
NUP54-209ENST00000510569 Q6JHZ5 121 aa1.93□□□□□ -2.1
NUP54-209ENST00000510569 LINC00322Q6ZN03 302 aaPredicted RBP1.93□□□□□ -2.1
NUP54-209ENST00000510569 Q86TA4 180 aa1.93□□□□□ -2.1
NUP54-209ENST00000510569 CNFNQ9BYD5 112 aa1.93□□□□□ -2.1
NUP54-209ENST00000510569 ORMDL1Q9P0S3 153 aa1.93□□□□□ -2.1
NUP54-209ENST00000510569 LRRK2Q5S007 2527 aa1.93□□□□□ -2.1
NUP54-209ENST00000510569 ITPR2Q14571 2701 aa1.93□□□□□ -2.1
NUP54-209ENST00000510569 OTOGQ6ZRI0 2925 aa1.93□□□□□ -2.1
NUP54-209ENST00000510569 CSMD1Q96PZ7 3565 aa1.93□□□□□ -2.1
NUP54-209ENST00000510569 SPTA1P02549 2419 aa1.92□□□□□ -2.1
NUP54-209ENST00000510569 ARHGAP32A7KAX9 2087 aa1.92□□□□□ -2.1
NUP54-209ENST00000510569 CLPSL1A2RUU4 121 aa1.92□□□□□ -2.1
NUP54-209ENST00000510569 FAM223BA6NKX1 122 aa1.92□□□□□ -2.1
NUP54-209ENST00000510569 DEFB108AA8MXU0 73 aa1.92□□□□□ -2.1
NUP54-209ENST00000510569 CTSGP08311 255 aa1.92□□□□□ -2.1
NUP54-209ENST00000510569 SFTA2Q6UW10 78 aa1.92□□□□□ -2.1
NUP54-209ENST00000510569 AMELXQ99217 191 aa1.92□□□□□ -2.1
NUP54-209ENST00000510569 ABCA2Q9BZC7 2435 aa1.92□□□□□ -2.1
NUP54-209ENST00000510569 VPS13CQ709C8 3753 aa1.92□□□□□ -2.1
NUP54-209ENST00000510569 NF1P21359 2839 aa1.92□□□□□ -2.1
NUP54-209ENST00000510569 APCP25054 2843 aa1.92□□□□□ -2.1
NUP54-209ENST00000510569 FBN2P35556 2912 aa1.92□□□□□ -2.1
NUP54-209ENST00000510569 HIVEP3Q5T1R4 2406 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 CELSR1Q9NYQ6 3014 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 ZFHX3Q15911 3703 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 ABCA12Q86UK0 2595 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 DOPEY2Q9Y3R5 2298 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 IGKV3-7A0A075B6H7 116 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 TRBV6-8A0A0A6YYG3 113 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 H3BRN7 92 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 I3L2K1 104 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 NDUFA3O95167 84 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 IGHV3-30P01768 117 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 IGHV3-30-5P0DP03 117 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 FXYD3Q14802 87 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 BAGE3Q86Y29 109 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 BAGE2Q86Y30 109 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 FDCSPQ8NFU4 85 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 HILPDAQ9Y5L2 63 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 ANKRD17O75179 2603 aaKnown RBP1.91□□□□□ -2.1
NUP54-209ENST00000510569 MYO9AB2RTY4 2548 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 NBPF19A0A087WUL8 3843 aa1.91□□□□□ -2.1
NUP54-209ENST00000510569 SVEP1Q4LDE5 3571 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms