RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 TRIOBPQ9H2D6 2365 aa1.33□□□□□ -2.2
HMGB3P3-201ENST00000510526 SHANK1Q9Y566 2161 aa1.32□□□□□ -2.2
HMGB3P3-201ENST00000510526 LINC00315P59091 139 aa1.32□□□□□ -2.2
HMGB3P3-201ENST00000510526 PRB3Q04118 309 aaPredicted RBP1.32□□□□□ -2.2
HMGB3P3-201ENST00000510526 PRO3102Q9H379 93 aa1.32□□□□□ -2.2
HMGB3P3-201ENST00000510526 PRR14LQ5THK1 2151 aa1.32□□□□□ -2.2
HMGB3P3-201ENST00000510526 ZFHX2Q9C0A1 2572 aaPredicted RBP1.32□□□□□ -2.2
HMGB3P3-201ENST00000510526 COL4A5P29400 1685 aa1.32□□□□□ -2.2
HMGB3P3-201ENST00000510526 GVQW2A0A096LPI5 108 aaPredicted RBP1.31□□□□□ -2.2
HMGB3P3-201ENST00000510526 M0QY20 66 aa1.31□□□□□ -2.2
HMGB3P3-201ENST00000510526 TPRXLQ17RH7 258 aa1.31□□□□□ -2.2
HMGB3P3-201ENST00000510526 WFDC10BQ8IUB3 73 aa1.31□□□□□ -2.2
HMGB3P3-201ENST00000510526 SPACA4Q8TDM5 124 aa1.31□□□□□ -2.2
HMGB3P3-201ENST00000510526 MRPL34Q9BQ48 92 aaKnown RBP1.31□□□□□ -2.2
HMGB3P3-201ENST00000510526 LCE3DQ9BYE3 92 aa1.31□□□□□ -2.2
HMGB3P3-201ENST00000510526 COL27A1Q8IZC6 1860 aaPredicted RBP1.31□□□□□ -2.2
HMGB3P3-201ENST00000510526 COL4A2P08572 1712 aa1.3□□□□□ -2.2
HMGB3P3-201ENST00000510526 A0A096LNT2 108 aa1.3□□□□□ -2.2
HMGB3P3-201ENST00000510526 H3BUA1 57 aa1.3□□□□□ -2.2
HMGB3P3-201ENST00000510526 KNTC1P50748 2209 aa1.3□□□□□ -2.2
HMGB3P3-201ENST00000510526 G3V318 75 aa1.29□□□□□ -2.2
HMGB3P3-201ENST00000510526 K7EIM0 57 aa1.29□□□□□ -2.2
HMGB3P3-201ENST00000510526 PRR9Q5T870 116 aa1.29□□□□□ -2.2
HMGB3P3-201ENST00000510526 WFDC13Q8IUB5 93 aa1.29□□□□□ -2.2
HMGB3P3-201ENST00000510526 RTTNQ86VV8 2226 aa1.28□□□□□ -2.2
HMGB3P3-201ENST00000510526 KNL1Q8NG31 2342 aa1.28□□□□□ -2.2
HMGB3P3-201ENST00000510526 WT1-ASQ06250 92 aa1.28□□□□□ -2.2
HMGB3P3-201ENST00000510526 DEFB109BQ30KR1 87 aa1.28□□□□□ -2.2
HMGB3P3-201ENST00000510526 PCOTHQ58A44 107 aa1.28□□□□□ -2.2
HMGB3P3-201ENST00000510526 LEAP2Q969E1 77 aa1.28□□□□□ -2.2
HMGB3P3-201ENST00000510526 TOMM7Q9P0U1 55 aa1.28□□□□□ -2.2
HMGB3P3-201ENST00000510526 F5P12259 2224 aa1.28□□□□□ -2.2
HMGB3P3-201ENST00000510526 CACNA1CQ13936 2221 aa1.28□□□□□ -2.2
HMGB3P3-201ENST00000510526 ANKRD17O75179 2603 aaKnown RBP1.27□□□□□ -2.21
HMGB3P3-201ENST00000510526 RPL37P61927 97 aaKnown RBP1.27□□□□□ -2.21
HMGB3P3-201ENST00000510526 Q6ZRN7 208 aaPredicted RBP1.27□□□□□ -2.21
HMGB3P3-201ENST00000510526 CADP27708 2225 aa1.27□□□□□ -2.21
HMGB3P3-201ENST00000510526 CACNA1EQ15878 2313 aa1.26□□□□□ -2.21
HMGB3P3-201ENST00000510526 URB1O60287 2271 aaKnown RBP1.26□□□□□ -2.21
HMGB3P3-201ENST00000510526 I3L2K1 104 aa1.26□□□□□ -2.21
HMGB3P3-201ENST00000510526 RPL39P5Q59GN2 51 aa1.26□□□□□ -2.21
HMGB3P3-201ENST00000510526 UNQ6190/PRO20217Q6UXQ8 127 aa1.25□□□□□ -2.21
HMGB3P3-201ENST00000510526 BRD3OSQ6XYD6 125 aa1.25□□□□□ -2.21
HMGB3P3-201ENST00000510526 KAAG1Q9UBP8 84 aa1.25□□□□□ -2.21
HMGB3P3-201ENST00000510526 SORL1Q92673 2214 aa1.25□□□□□ -2.21
HMGB3P3-201ENST00000510526 TPRP12270 2363 aaKnown RBP1.25□□□□□ -2.21
HMGB3P3-201ENST00000510526 CNOT1A5YKK6 2376 aaKnown RBP1.24□□□□□ -2.21
HMGB3P3-201ENST00000510526 DEFB108AA8MXU0 73 aa1.24□□□□□ -2.21
HMGB3P3-201ENST00000510526 DEFB123Q8N688 67 aa1.24□□□□□ -2.21
HMGB3P3-201ENST00000510526 CACNA1BQ00975 2339 aa1.24□□□□□ -2.21
HMGB3P3-201ENST00000510526 ZFHX3Q15911 3703 aa1.24□□□□□ -2.21
HMGB3P3-201ENST00000510526 CNTRLQ7Z7A1 2325 aa1.23□□□□□ -2.21
HMGB3P3-201ENST00000510526 AHCTF1Q8WYP5 2266 aa1.23□□□□□ -2.21
HMGB3P3-201ENST00000510526 USF3Q68DE3 2245 aa1.23□□□□□ -2.21
HMGB3P3-201ENST00000510526 COX6A2Q02221 97 aa1.23□□□□□ -2.21
HMGB3P3-201ENST00000510526 H1FX-AS1Q4G0G2 97 aa1.23□□□□□ -2.21
HMGB3P3-201ENST00000510526 IGFL1Q6UW32 110 aa1.23□□□□□ -2.21
HMGB3P3-201ENST00000510526 PLCE1Q9P212 2302 aa1.22□□□□□ -2.21
HMGB3P3-201ENST00000510526 PTPRQQ9UMZ3 2332 aa1.22□□□□□ -2.21
HMGB3P3-201ENST00000510526 WNK2Q9Y3S1 2297 aa1.22□□□□□ -2.21
HMGB3P3-201ENST00000510526 MMP24-AS1A0A0U1RRL7 71 aa1.22□□□□□ -2.21
HMGB3P3-201ENST00000510526 NOP10Q9NPE3 64 aaKnown RBP1.22□□□□□ -2.21
HMGB3P3-201ENST00000510526 DOPEY2Q9Y3R5 2298 aa1.22□□□□□ -2.21
HMGB3P3-201ENST00000510526 ABCA1O95477 2261 aa1.21□□□□□ -2.22
HMGB3P3-201ENST00000510526 H0YAA0 97 aa1.21□□□□□ -2.22
HMGB3P3-201ENST00000510526 LYNX1P0DP58 116 aa1.21□□□□□ -2.22
HMGB3P3-201ENST00000510526 KLK9Q2XQG4 91 aa1.21□□□□□ -2.22
HMGB3P3-201ENST00000510526 KRTAP13-2Q52LG2 175 aa1.21□□□□□ -2.22
HMGB3P3-201ENST00000510526 ASXL3Q9C0F0 2248 aa1.21□□□□□ -2.22
HMGB3P3-201ENST00000510526 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.21□□□□□ -2.22
HMGB3P3-201ENST00000510526 TECTAO75443 2155 aa1.2□□□□□ -2.22
HMGB3P3-201ENST00000510526 H0YGG7 62 aa1.2□□□□□ -2.22
HMGB3P3-201ENST00000510526 ICE1Q9Y2F5 2266 aa1.2□□□□□ -2.22
HMGB3P3-201ENST00000510526 ASCC3Q8N3C0 2202 aaKnown RBP1.19□□□□□ -2.22
HMGB3P3-201ENST00000510526 H3BUX3 64 aa1.19□□□□□ -2.22
HMGB3P3-201ENST00000510526 DEFB130BP0DP73 79 aa1.19□□□□□ -2.22
HMGB3P3-201ENST00000510526 DEFB130AP0DP74 79 aa1.19□□□□□ -2.22
HMGB3P3-201ENST00000510526 Q6ZSA8 131 aa1.19□□□□□ -2.22
HMGB3P3-201ENST00000510526 DEFB105AQ8NG35 78 aa1.19□□□□□ -2.22
HMGB3P3-201ENST00000510526 COX14Q96I36 57 aa1.19□□□□□ -2.22
HMGB3P3-201ENST00000510526 FN1P02751 2386 aaKnown RBP1.19□□□□□ -2.22
HMGB3P3-201ENST00000510526 BPTFQ12830 3046 aa1.18□□□□□ -2.22
HMGB3P3-201ENST00000510526 PRLHP81277 87 aa1.18□□□□□ -2.22
HMGB3P3-201ENST00000510526 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
HMGB3P3-201ENST00000510526 PRO0255Q9UI72 69 aa1.18□□□□□ -2.22
HMGB3P3-201ENST00000510526 A8MTW9 85 aa1.17□□□□□ -2.22
HMGB3P3-201ENST00000510526 K7EIL1 84 aa1.17□□□□□ -2.22
HMGB3P3-201ENST00000510526 CLPSL2Q6UWE3 100 aa1.17□□□□□ -2.22
HMGB3P3-201ENST00000510526 FAM208BQ5VWN6 2430 aa1.17□□□□□ -2.22
HMGB3P3-201ENST00000510526 KRTAP10-10P60014 251 aa1.16□□□□□ -2.22
HMGB3P3-201ENST00000510526 Q5VSD8 79 aa1.16□□□□□ -2.22
HMGB3P3-201ENST00000510526 APLNQ9ULZ1 77 aa1.16□□□□□ -2.22
HMGB3P3-201ENST00000510526 CACNA1GO43497 2377 aa1.16□□□□□ -2.22
HMGB3P3-201ENST00000510526 NAV3Q8IVL0 2385 aa1.15□□□□□ -2.22
HMGB3P3-201ENST00000510526 STATHP02808 62 aa1.15□□□□□ -2.23
HMGB3P3-201ENST00000510526 SPRR1BP22528 89 aa1.15□□□□□ -2.23
HMGB3P3-201ENST00000510526 SPRR1AP35321 89 aa1.15□□□□□ -2.23
HMGB3P3-201ENST00000510526 DEFB119Q8N690 84 aa1.15□□□□□ -2.23
HMGB3P3-201ENST00000510526 DEFB104AQ8WTQ1 72 aa1.15□□□□□ -2.23
HMGB3P3-201ENST00000510526 GPR179Q6PRD1 2367 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms