RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 FCER1GP30273 86 aa3.17□□□□□ -1.9
NEK1-204ENST00000509912 RNASE4P34096 147 aaKnown RBP3.17□□□□□ -1.9
NEK1-204ENST00000509912 CNBPP62633 177 aaKnown RBP3.17□□□□□ -1.9
NEK1-204ENST00000509912 RPL18AQ02543 176 aaKnown RBP3.17□□□□□ -1.9
NEK1-204ENST00000509912 ESRGQ1W209 222 aa3.17□□□□□ -1.9
NEK1-204ENST00000509912 A0A087WTM6 91 aa3.16□□□□□ -1.9
NEK1-204ENST00000509912 IGKV2D-26A0A0A0MRZ7 120 aa3.16□□□□□ -1.9
NEK1-204ENST00000509912 TRBV7-6A0A0J9YX20 115 aa3.16□□□□□ -1.9
NEK1-204ENST00000509912 LINC01549A6NIU2 74 aa3.16□□□□□ -1.9
NEK1-204ENST00000509912 NPYP01303 97 aa3.16□□□□□ -1.9
NEK1-204ENST00000509912 IGHV3-53P01767 116 aa3.16□□□□□ -1.9
NEK1-204ENST00000509912 TLX1NBP0CAT3 122 aa3.16□□□□□ -1.9
NEK1-204ENST00000509912 FAM104BQ5XKR9 115 aa3.16□□□□□ -1.9
NEK1-204ENST00000509912 SERP2Q8N6R1 65 aa3.16□□□□□ -1.9
NEK1-204ENST00000509912 KRTAP1-5Q9BYS1 174 aa3.16□□□□□ -1.9
NEK1-204ENST00000509912 PRR34Q9NV39 138 aa3.16□□□□□ -1.9
NEK1-204ENST00000509912 APOBP04114 4563 aaKnown RBP3.16□□□□□ -1.9
NEK1-204ENST00000509912 PRM2P04554 102 aa3.16□□□□□ -1.9
NEK1-204ENST00000509912 HIST1H4AP62805 103 aaKnown RBP3.16□□□□□ -1.9
NEK1-204ENST00000509912 MRPL51Q4U2R6 128 aaKnown RBP3.16□□□□□ -1.9
NEK1-204ENST00000509912 FAM19A3Q7Z5A8 133 aa3.16□□□□□ -1.9
NEK1-204ENST00000509912 KTN1-AS1Q86SY8 53 aa3.16□□□□□ -1.9
NEK1-204ENST00000509912 NOP10Q9NPE3 64 aaKnown RBP3.16□□□□□ -1.9
NEK1-204ENST00000509912 A0A0J9YY99 117 aa3.15□□□□□ -1.9
NEK1-204ENST00000509912 GNRH2O43555 120 aa3.15□□□□□ -1.9
NEK1-204ENST00000509912 CKS2P33552 79 aa3.15□□□□□ -1.9
NEK1-204ENST00000509912 IFI27P40305 119 aaPredicted RBP3.15□□□□□ -1.9
NEK1-204ENST00000509912 LINC00315P59091 139 aa3.15□□□□□ -1.9
NEK1-204ENST00000509912 M0R378 163 aa3.15□□□□□ -1.91
NEK1-204ENST00000509912 Q5VSD8 79 aa3.15□□□□□ -1.91
NEK1-204ENST00000509912 SPANXN1Q5VSR9 72 aa3.15□□□□□ -1.91
NEK1-204ENST00000509912 C5orf38Q86SI9 138 aa3.15□□□□□ -1.91
NEK1-204ENST00000509912 ORMDL3Q8N138 153 aa3.15□□□□□ -1.91
NEK1-204ENST00000509912 PANO1I0J062 215 aa3.15□□□□□ -1.91
NEK1-204ENST00000509912 M0R381 172 aa3.15□□□□□ -1.91
NEK1-204ENST00000509912 HTN1P15515 57 aa3.15□□□□□ -1.91
NEK1-204ENST00000509912 S100A4P26447 101 aaKnown RBP3.15□□□□□ -1.91
NEK1-204ENST00000509912 KRTAP10-4P60372 401 aaPredicted RBP3.15□□□□□ -1.91
NEK1-204ENST00000509912 Q8N814 137 aa3.15□□□□□ -1.91
NEK1-204ENST00000509912 TRAV12-3A0A0B4J271 114 aa3.14□□□□□ -1.91
NEK1-204ENST00000509912 UBE2WQ96B02 151 aa3.14□□□□□ -1.91
NEK1-204ENST00000509912 IGHV1-58A0A0C4DH39 117 aa3.14□□□□□ -1.91
NEK1-204ENST00000509912 TRBV6-5A0A0K0K1A5 114 aa3.14□□□□□ -1.91
NEK1-204ENST00000509912 CCKP06307 115 aa3.14□□□□□ -1.91
NEK1-204ENST00000509912 SMCR5Q8TEV8 140 aa3.14□□□□□ -1.91
NEK1-204ENST00000509912 LAMTOR3Q9UHA4 124 aa3.14□□□□□ -1.91
NEK1-204ENST00000509912 TRBV7-3A0A075B6L6 115 aa3.13□□□□□ -1.91
NEK1-204ENST00000509912 H0Y9J4 135 aa3.13□□□□□ -1.91
NEK1-204ENST00000509912 TIMM21Q9BVV7 248 aa3.13□□□□□ -1.91
NEK1-204ENST00000509912 PHLDA3Q9Y5J5 127 aa3.13□□□□□ -1.91
NEK1-204ENST00000509912 RNASE3P12724 160 aaKnown RBP3.13□□□□□ -1.91
NEK1-204ENST00000509912 LINC00643Q86TS7 51 aa3.13□□□□□ -1.91
NEK1-204ENST00000509912 DNAH5Q8TE73 4624 aa3.13□□□□□ -1.91
NEK1-204ENST00000509912 A0A096LNJ9 63 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 A8MUN3 132 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 TMEM256-PLSCR3K7ERE1 68 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 ZNF73O43830 326 aaPredicted RBP3.12□□□□□ -1.91
NEK1-204ENST00000509912 LGALS3P17931 250 aaKnown RBP3.12□□□□□ -1.91
NEK1-204ENST00000509912 UBE2AP49459 152 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 KIF25-AS1Q9Y6Z4 181 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 TRGV2A0A075B6R0 118 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 PPP1R17O96001 155 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 MGPP08493 103 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 KRTAP10-1P60331 282 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 MIAQ16674 131 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 TMEM170BQ5T4T1 132 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 KRTAP26-1Q6PEX3 210 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 SOSTDC1Q6X4U4 206 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 DEFB104AQ8WTQ1 72 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 LINC01600Q96MT4 127 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 Q6ZTI0 123 aa3.12□□□□□ -1.91
NEK1-204ENST00000509912 TRGV1A0A0A0MS02 117 aa3.11□□□□□ -1.91
NEK1-204ENST00000509912 RPL39LQ96EH5 51 aaKnown RBP3.11□□□□□ -1.91
NEK1-204ENST00000509912 FAT1Q14517 4588 aa3.11□□□□□ -1.91
NEK1-204ENST00000509912 DMBT1Q9UGM3 2413 aaPredicted RBP3.11□□□□□ -1.91
NEK1-204ENST00000509912 H7BZZ5 65 aa3.11□□□□□ -1.91
NEK1-204ENST00000509912 HBDP02042 147 aa3.11□□□□□ -1.91
NEK1-204ENST00000509912 UBE2D1P51668 147 aa3.11□□□□□ -1.91
NEK1-204ENST00000509912 Q8N8P6 123 aa3.11□□□□□ -1.91
NEK1-204ENST00000509912 FUSP35637 526 aaKnown RBP eCLIP3.1□□□□□ -1.91
NEK1-204ENST00000509912 FAM74A4Q5TZK3 123 aa3.1□□□□□ -1.91
NEK1-204ENST00000509912 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
NEK1-204ENST00000509912 SMR3BP02814 79 aaPredicted RBP3.1□□□□□ -1.91
NEK1-204ENST00000509912 FAM229BQ4G0N7 80 aa3.1□□□□□ -1.91
NEK1-204ENST00000509912 C20orf197Q8N268 126 aa3.1□□□□□ -1.91
NEK1-204ENST00000509912 ZNF706Q9Y5V0 76 aaPredicted RBP3.1□□□□□ -1.91
NEK1-204ENST00000509912 TRBV27A0A0K0K1C4 114 aa3.09□□□□□ -1.91
NEK1-204ENST00000509912 LST1O00453 97 aa3.09□□□□□ -1.91
NEK1-204ENST00000509912 NDUFS5O43920 106 aa3.09□□□□□ -1.91
NEK1-204ENST00000509912 MRPS36P82909 103 aaKnown RBP3.09□□□□□ -1.91
NEK1-204ENST00000509912 COPS9Q8WXC6 57 aa3.09□□□□□ -1.91
NEK1-204ENST00000509912 IFI27L1Q96BM0 104 aa3.09□□□□□ -1.91
NEK1-204ENST00000509912 PLAC8Q9NZF1 115 aa3.09□□□□□ -1.91
NEK1-204ENST00000509912 IGLV10-54A0A075B6I4 117 aa3.09□□□□□ -1.91
NEK1-204ENST00000509912 TRBV10-2A0A0K0K1G8 114 aa3.09□□□□□ -1.91
NEK1-204ENST00000509912 ACYP1P07311 99 aa3.09□□□□□ -1.91
NEK1-204ENST00000509912 XCL1P47992 114 aa3.09□□□□□ -1.91
NEK1-204ENST00000509912 C2orf82Q6UX34 121 aa3.09□□□□□ -1.91
NEK1-204ENST00000509912 C9orf163Q8N9P6 203 aa3.09□□□□□ -1.91
NEK1-204ENST00000509912 IGHV3-73A0A0B4J1V6 119 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms