RNA–Protein interactions for RNA: ENST00000509805.5

SMN2-209, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2

Gene SMN2, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-209ENST00000509805 PKD1P98161 4303 aa-0.59□□□□□ -2.5
SMN2-209ENST00000509805 HTTP42858 3142 aa-0.59□□□□□ -2.5
SMN2-209ENST00000509805 TEX14Q8IWB6 1497 aa-0.59□□□□□ -2.5
SMN2-209ENST00000509805 SPTY2D1-AS1A0A0U1RR47 76 aa-0.59□□□□□ -2.5
SMN2-209ENST00000509805 CCL22O00626 93 aa-0.59□□□□□ -2.5
SMN2-209ENST00000509805 TCEAL7Q9BRU2 100 aa-0.59□□□□□ -2.5
SMN2-209ENST00000509805 PTPN23Q9H3S7 1636 aa-0.6□□□□□ -2.5
SMN2-209ENST00000509805 SMG1Q96Q15 3661 aaKnown RBP-0.6□□□□□ -2.5
SMN2-209ENST00000509805 CRYBG1Q9Y4K1 1723 aa-0.6□□□□□ -2.51
SMN2-209ENST00000509805 F8WEM9 126 aa-0.6□□□□□ -2.51
SMN2-209ENST00000509805 IGLC2P0DOY2 106 aa-0.6□□□□□ -2.51
SMN2-209ENST00000509805 IGLC3P0DOY3 106 aa-0.6□□□□□ -2.51
SMN2-209ENST00000509805 ETDBQ3ZM63 59 aa-0.6□□□□□ -2.51
SMN2-209ENST00000509805 HEPN1Q6WQI6 88 aa-0.6□□□□□ -2.51
SMN2-209ENST00000509805 WFDC13Q8IUB5 93 aa-0.6□□□□□ -2.51
SMN2-209ENST00000509805 ITPR1Q14643 2758 aa-0.6□□□□□ -2.51
SMN2-209ENST00000509805 BCORQ6W2J9 1755 aa-0.6□□□□□ -2.51
SMN2-209ENST00000509805 DNAH1Q9P2D7 4330 aa-0.6□□□□□ -2.51
SMN2-209ENST00000509805 CLIP1P30622 1438 aa-0.61□□□□□ -2.51
SMN2-209ENST00000509805 CLTCQ00610 1675 aaKnown RBP-0.61□□□□□ -2.51
SMN2-209ENST00000509805 LEPROTL1O95214 131 aa-0.61□□□□□ -2.51
SMN2-209ENST00000509805 RBP2P50120 134 aa-0.61□□□□□ -2.51
SMN2-209ENST00000509805 HMGN3Q15651 99 aa-0.61□□□□□ -2.51
SMN2-209ENST00000509805 COL5A1-AS1Q5SY13 56 aa-0.61□□□□□ -2.51
SMN2-209ENST00000509805 CDKN2A-AS1Q9UH64 79 aa-0.61□□□□□ -2.51
SMN2-209ENST00000509805 KIF20BQ96Q89 1820 aa-0.61□□□□□ -2.51
SMN2-209ENST00000509805 RELNP78509 3460 aa-0.62□□□□□ -2.51
SMN2-209ENST00000509805 LYSTQ99698 3801 aa-0.62□□□□□ -2.51
SMN2-209ENST00000509805 D6R8Y8 96 aa-0.62□□□□□ -2.51
SMN2-209ENST00000509805 FAUP35544 74 aaKnown RBP-0.62□□□□□ -2.51
SMN2-209ENST00000509805 NCMAPQ5T1S8 102 aa-0.62□□□□□ -2.51
SMN2-209ENST00000509805 ZNF720Q7Z2F6 126 aa-0.62□□□□□ -2.51
SMN2-209ENST00000509805 MUSTN1Q8IVN3 82 aa-0.62□□□□□ -2.51
SMN2-209ENST00000509805 DPY30Q9C005 99 aa-0.62□□□□□ -2.51
SMN2-209ENST00000509805 HIGD1BQ9P298 99 aa-0.62□□□□□ -2.51
SMN2-209ENST00000509805 DYNC1H1Q14204 4646 aaKnown RBP-0.62□□□□□ -2.51
SMN2-209ENST00000509805 QSER1Q2KHR3 1735 aa-0.62□□□□□ -2.51
SMN2-209ENST00000509805 EPRSP07814 1512 aaKnown RBP-0.63□□□□□ -2.51
SMN2-209ENST00000509805 CICQ96RK0 1608 aaPredicted RBP-0.63□□□□□ -2.51
SMN2-209ENST00000509805 APOBP04114 4563 aaKnown RBP-0.63□□□□□ -2.51
SMN2-209ENST00000509805 UQCRHLA0A096LP55 91 aa-0.63□□□□□ -2.51
SMN2-209ENST00000509805 LINC00032P0C843 101 aa-0.63□□□□□ -2.51
SMN2-209ENST00000509805 ALKAL2Q6UX46 152 aa-0.63□□□□□ -2.51
SMN2-209ENST00000509805 ACBD7Q8N6N7 88 aa-0.63□□□□□ -2.51
SMN2-209ENST00000509805 UBE2D4Q9Y2X8 147 aa-0.63□□□□□ -2.51
SMN2-209ENST00000509805 MAGI2Q86UL8 1455 aa-0.63□□□□□ -2.51
SMN2-209ENST00000509805 MTORP42345 2549 aa-0.63□□□□□ -2.51
SMN2-209ENST00000509805 MGAM2Q2M2H8 2515 aa-0.63□□□□□ -2.51
SMN2-209ENST00000509805 NBEAQ8NFP9 2946 aa-0.63□□□□□ -2.51
SMN2-209ENST00000509805 RGPD2P0DJD1 1756 aa-0.63□□□□□ -2.51
SMN2-209ENST00000509805 A0A0C4DFX4 3053 aa-0.63□□□□□ -2.51
SMN2-209ENST00000509805 ALKQ9UM73 1620 aa-0.64□□□□□ -2.51
SMN2-209ENST00000509805 PKD1L3Q7Z443 1732 aa-0.64□□□□□ -2.51
SMN2-209ENST00000509805 ITPR2Q14571 2701 aa-0.64□□□□□ -2.51
SMN2-209ENST00000509805 SRCAPQ6ZRS2 3230 aa-0.64□□□□□ -2.51
SMN2-209ENST00000509805 SACSQ9NZJ4 4579 aa-0.64□□□□□ -2.51
SMN2-209ENST00000509805 PREX1Q8TCU6 1659 aa-0.64□□□□□ -2.51
SMN2-209ENST00000509805 FANCAO15360 1455 aa-0.64□□□□□ -2.51
SMN2-209ENST00000509805 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.64□□□□□ -2.51
SMN2-209ENST00000509805 ANKRD26Q9UPS8 1709 aa-0.64□□□□□ -2.51
SMN2-209ENST00000509805 GCN1Q92616 2671 aaKnown RBP-0.64□□□□□ -2.51
SMN2-209ENST00000509805 RIF1Q5UIP0 2472 aaKnown RBP-0.65□□□□□ -2.51
SMN2-209ENST00000509805 CSMD1Q96PZ7 3565 aa-0.65□□□□□ -2.51
SMN2-209ENST00000509805 SPENQ96T58 3664 aaKnown RBP-0.66□□□□□ -2.51
SMN2-209ENST00000509805 MYH4Q9Y623 1939 aa-0.66□□□□□ -2.51
SMN2-209ENST00000509805 ABCC10Q5T3U5 1492 aa-0.66□□□□□ -2.51
SMN2-209ENST00000509805 RGPD1P0DJD0 1748 aa-0.66□□□□□ -2.51
SMN2-209ENST00000509805 KNL1Q8NG31 2342 aa-0.66□□□□□ -2.51
SMN2-209ENST00000509805 COX7BP24311 80 aa-0.66□□□□□ -2.52
SMN2-209ENST00000509805 LRRC7Q96NW7 1537 aa-0.66□□□□□ -2.52
SMN2-209ENST00000509805 CEP295Q9C0D2 2601 aa-0.66□□□□□ -2.52
SMN2-209ENST00000509805 DNAH9Q9NYC9 4486 aa-0.66□□□□□ -2.52
SMN2-209ENST00000509805 CHD7Q9P2D1 2997 aa-0.66□□□□□ -2.52
SMN2-209ENST00000509805 UBR1Q8IWV7 1749 aa-0.67□□□□□ -2.52
SMN2-209ENST00000509805 ATP10BO94823 1461 aa-0.67□□□□□ -2.52
SMN2-209ENST00000509805 UTP20O75691 2785 aaKnown RBP-0.67□□□□□ -2.52
SMN2-209ENST00000509805 CCDC168Q8NDH2 2452 aa-0.67□□□□□ -2.52
SMN2-209ENST00000509805 M0R143 59 aa-0.67□□□□□ -2.52
SMN2-209ENST00000509805 REV3LO60673 3130 aa-0.67□□□□□ -2.52
SMN2-209ENST00000509805 C4AP0C0L4 1744 aa-0.68□□□□□ -2.52
SMN2-209ENST00000509805 C4BP0C0L5 1744 aa-0.68□□□□□ -2.52
SMN2-209ENST00000509805 TROQ12816 1431 aaPredicted RBP-0.68□□□□□ -2.52
SMN2-209ENST00000509805 KRTAP20-1Q3LI63 56 aa-0.68□□□□□ -2.52
SMN2-209ENST00000509805 UBR3Q6ZT12 1888 aa-0.68□□□□□ -2.52
SMN2-209ENST00000509805 SNHG12Q9BXW3 62 aa-0.68□□□□□ -2.52
SMN2-209ENST00000509805 NBASA2RRP1 2371 aa-0.68□□□□□ -2.52
SMN2-209ENST00000509805 MYO3AQ8NEV4 1616 aa-0.68□□□□□ -2.52
SMN2-209ENST00000509805 ATP7BP35670 1465 aa-0.68□□□□□ -2.52
SMN2-209ENST00000509805 DNAH11Q96DT5 4516 aa-0.68□□□□□ -2.52
SMN2-209ENST00000509805 EYSQ5T1H1 3165 aa-0.69□□□□□ -2.52
SMN2-209ENST00000509805 LRRK2Q5S007 2527 aa-0.69□□□□□ -2.52
SMN2-209ENST00000509805 CFAP46Q8IYW2 2715 aa-0.69□□□□□ -2.52
SMN2-209ENST00000509805 VPS8Q8N3P4 1428 aa-0.69□□□□□ -2.52
SMN2-209ENST00000509805 H0YGG7 62 aa-0.69□□□□□ -2.52
SMN2-209ENST00000509805 KALRNO60229 2985 aa-0.69□□□□□ -2.52
SMN2-209ENST00000509805 NDUFA3O95167 84 aa-0.69□□□□□ -2.52
SMN2-209ENST00000509805 NMSQ5H8A3 153 aa-0.69□□□□□ -2.52
SMN2-209ENST00000509805 SPRR2FQ96RM1 72 aa-0.69□□□□□ -2.52
SMN2-209ENST00000509805 C20orf78Q9BR46 151 aa-0.69□□□□□ -2.52
SMN2-209ENST00000509805 LRRC9Q6ZRR7 1453 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms