RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 TRBV10-3A0A0K0K1G6 114 aa8.65□□□□□ -1.02
CYSTM1-204ENST00000509789 PCP4L1A6NKN8 68 aa8.65□□□□□ -1.02
CYSTM1-204ENST00000509789 IGLV6-57P01721 117 aa8.65□□□□□ -1.02
CYSTM1-204ENST00000509789 CBY1Q9Y3M2 126 aa8.65□□□□□ -1.02
CYSTM1-204ENST00000509789 A0A0B4J2C4 111 aa8.64□□□□□ -1.03
CYSTM1-204ENST00000509789 NHP2Q9NX24 153 aaKnown RBP8.63□□□□□ -1.03
CYSTM1-204ENST00000509789 KRTAP4-7Q9BYR0 210 aa8.62□□□□□ -1.03
CYSTM1-204ENST00000509789 PRO1854Q9UHT4 67 aa8.62□□□□□ -1.03
CYSTM1-204ENST00000509789 EPPK1P58107 5090 aaKnown RBP8.62□□□□□ -1.03
CYSTM1-204ENST00000509789 PRYO14603 147 aa8.61□□□□□ -1.03
CYSTM1-204ENST00000509789 SMR3BP02814 79 aaPredicted RBP8.61□□□□□ -1.03
CYSTM1-204ENST00000509789 RPL13AP40429 203 aaKnown RBP8.61□□□□□ -1.03
CYSTM1-204ENST00000509789 BATFQ16520 125 aa8.61□□□□□ -1.03
CYSTM1-204ENST00000509789 KCNQ1DNQ9H478 68 aa8.61□□□□□ -1.03
CYSTM1-204ENST00000509789 TRAV23DV6A0A075B6W5 121 aa8.6□□□□□ -1.03
CYSTM1-204ENST00000509789 A0A1B0GWB2 263 aa8.6□□□□□ -1.03
CYSTM1-204ENST00000509789 LCE1DQ5T752 114 aa8.6□□□□□ -1.03
CYSTM1-204ENST00000509789 REG3GQ6UW15 175 aa8.6□□□□□ -1.03
CYSTM1-204ENST00000509789 KRTAP11-1Q8IUC1 163 aa8.6□□□□□ -1.03
CYSTM1-204ENST00000509789 APOBP04114 4563 aaKnown RBP8.59□□□□□ -1.03
CYSTM1-204ENST00000509789 H7C2G1 150 aa8.59□□□□□ -1.03
CYSTM1-204ENST00000509789 K7ERJ3 54 aa8.59□□□□□ -1.03
CYSTM1-204ENST00000509789 PSORS1C2Q9UIG4 136 aa8.59□□□□□ -1.03
CYSTM1-204ENST00000509789 ZNF73O43830 326 aaPredicted RBP8.57□□□□□ -1.04
CYSTM1-204ENST00000509789 GHRHP01286 108 aa8.57□□□□□ -1.04
CYSTM1-204ENST00000509789 SMIM11BQ8TCY0 68 aa8.57□□□□□ -1.04
CYSTM1-204ENST00000509789 RPL37AP61513 92 aaKnown RBP8.56□□□□□ -1.04
CYSTM1-204ENST00000509789 Q1RN00 199 aa8.56□□□□□ -1.04
CYSTM1-204ENST00000509789 C1orf137Q5JT78 98 aa8.56□□□□□ -1.04
CYSTM1-204ENST00000509789 ETDCA0A1B0GVM5 59 aa8.55□□□□□ -1.04
CYSTM1-204ENST00000509789 BCE1O60756 84 aa8.55□□□□□ -1.04
CYSTM1-204ENST00000509789 DIRC1Q969H9 104 aa8.55□□□□□ -1.04
CYSTM1-204ENST00000509789 SPRR1AP35321 89 aa8.54□□□□□ -1.04
CYSTM1-204ENST00000509789 RPL28P46779 137 aaKnown RBP8.54□□□□□ -1.04
CYSTM1-204ENST00000509789 C6orf99Q4VX62 202 aa8.54□□□□□ -1.04
CYSTM1-204ENST00000509789 SNHG12Q9BXW3 62 aa8.54□□□□□ -1.04
CYSTM1-204ENST00000509789 PLA2G1BP04054 148 aaKnown RBP8.53□□□□□ -1.04
CYSTM1-204ENST00000509789 UBE2AP49459 152 aa8.53□□□□□ -1.04
CYSTM1-204ENST00000509789 VAMP3Q15836 100 aa8.53□□□□□ -1.04
CYSTM1-204ENST00000509789 FAM19A1Q7Z5A9 133 aa8.53□□□□□ -1.04
CYSTM1-204ENST00000509789 TRBV7-6A0A0J9YX20 115 aa8.52□□□□□ -1.05
CYSTM1-204ENST00000509789 COX7BP24311 80 aa8.52□□□□□ -1.05
CYSTM1-204ENST00000509789 PSMB2P49721 201 aa8.52□□□□□ -1.05
CYSTM1-204ENST00000509789 HSPG2P98160 4391 aa8.52□□□□□ -1.05
CYSTM1-204ENST00000509789 KRTAP4-16G5E9R7 235 aaPredicted RBP8.51□□□□□ -1.05
CYSTM1-204ENST00000509789 TSPAN13O95857 204 aa8.51□□□□□ -1.05
CYSTM1-204ENST00000509789 IGLV7-43P04211 117 aa8.51□□□□□ -1.05
CYSTM1-204ENST00000509789 RYR1P21817 5038 aa8.51□□□□□ -1.05
CYSTM1-204ENST00000509789 B5MCH6 92 aa8.5□□□□□ -1.05
CYSTM1-204ENST00000509789 COL5A1-AS1Q5SY13 56 aa8.5□□□□□ -1.05
CYSTM1-204ENST00000509789 VPS13BQ7Z7G8 4022 aa8.49□□□□□ -1.05
CYSTM1-204ENST00000509789 BIRC6Q9NR09 4857 aa8.49□□□□□ -1.05
CYSTM1-204ENST00000509789 H0Y9J4 135 aa8.49□□□□□ -1.05
CYSTM1-204ENST00000509789 PRLHP81277 87 aa8.49□□□□□ -1.05
CYSTM1-204ENST00000509789 Q5VSD8 79 aa8.49□□□□□ -1.05
CYSTM1-204ENST00000509789 Q8N1X5 172 aa8.49□□□□□ -1.05
CYSTM1-204ENST00000509789 H0YGX0 51 aa8.48□□□□□ -1.05
CYSTM1-204ENST00000509789 TRIAP1O43715 76 aa8.48□□□□□ -1.05
CYSTM1-204ENST00000509789 ZNF861PO60384 105 aa8.48□□□□□ -1.05
CYSTM1-204ENST00000509789 COX6CP09669 75 aa8.48□□□□□ -1.05
CYSTM1-204ENST00000509789 ELOF1P60002 83 aaKnown RBP8.48□□□□□ -1.05
CYSTM1-204ENST00000509789 Q6ZRX8 168 aa8.48□□□□□ -1.05
CYSTM1-204ENST00000509789 KIAA1109Q2LD37 5005 aa8.47□□□□□ -1.05
CYSTM1-204ENST00000509789 INAFM2P0DMQ5 153 aa8.47□□□□□ -1.05
CYSTM1-204ENST00000509789 SCGB1C2P0DMR2 95 aa8.46□□□□□ -1.06
CYSTM1-204ENST00000509789 KRTAP13-1Q8IUC0 172 aa8.46□□□□□ -1.06
CYSTM1-204ENST00000509789 HIGD2AQ9BW72 106 aa8.46□□□□□ -1.06
CYSTM1-204ENST00000509789 DHRS4-AS1Q9P1J3 65 aa8.46□□□□□ -1.06
CYSTM1-204ENST00000509789 TAX1BP3O14907 124 aa8.45□□□□□ -1.06
CYSTM1-204ENST00000509789 SLC25A20O43772 301 aa8.45□□□□□ -1.06
CYSTM1-204ENST00000509789 KRTAP10-4P60372 401 aaPredicted RBP8.45□□□□□ -1.06
CYSTM1-204ENST00000509789 C9orf118A6NHY6 69 aa8.44□□□□□ -1.06
CYSTM1-204ENST00000509789 SNCGO76070 127 aa8.44□□□□□ -1.06
CYSTM1-204ENST00000509789 NAA38Q9BRA0 125 aaKnown RBP8.44□□□□□ -1.06
CYSTM1-204ENST00000509789 H3BUT2 72 aa8.43□□□□□ -1.06
CYSTM1-204ENST00000509789 SPINK6Q6UWN8 80 aa8.43□□□□□ -1.06
CYSTM1-204ENST00000509789 LINC00575Q6W349 94 aa8.43□□□□□ -1.06
CYSTM1-204ENST00000509789 SMCR5Q8TEV8 140 aa8.43□□□□□ -1.06
CYSTM1-204ENST00000509789 Q9BRP9 147 aa8.43□□□□□ -1.06
CYSTM1-204ENST00000509789 SRRM2Q9UQ35 2752 aaKnown RBP8.42□□□□□ -1.06
CYSTM1-204ENST00000509789 LYRM7Q5U5X0 104 aa8.42□□□□□ -1.06
CYSTM1-204ENST00000509789 KRTAP17-1Q9BYP8 105 aa8.42□□□□□ -1.06
CYSTM1-204ENST00000509789 FAT1Q14517 4588 aa8.42□□□□□ -1.06
CYSTM1-204ENST00000509789 hADV29S1A0JD25 119 aa8.41□□□□□ -1.06
CYSTM1-204ENST00000509789 CLEC2BQ92478 149 aa8.4□□□□□ -1.06
CYSTM1-204ENST00000509789 ERC2-IT1O76042 136 aa8.39□□□□□ -1.07
CYSTM1-204ENST00000509789 KRTAP4-9Q9BYQ8 210 aa8.39□□□□□ -1.07
CYSTM1-204ENST00000509789 A0A1B0GX51 115 aa8.38□□□□□ -1.07
CYSTM1-204ENST00000509789 A0A1W2PPM0 123 aa8.38□□□□□ -1.07
CYSTM1-204ENST00000509789 FABP2P12104 132 aa8.38□□□□□ -1.07
CYSTM1-204ENST00000509789 FAM218AQ96MZ4 157 aa8.38□□□□□ -1.07
CYSTM1-204ENST00000509789 ZNF706Q9Y5V0 76 aaPredicted RBP8.38□□□□□ -1.07
CYSTM1-204ENST00000509789 PKHD1L1Q86WI1 4243 aa8.35□□□□□ -1.07
CYSTM1-204ENST00000509789 TRBV20-1A0A075B6N2 111 aa8.35□□□□□ -1.07
CYSTM1-204ENST00000509789 LST1O00453 97 aa8.35□□□□□ -1.07
CYSTM1-204ENST00000509789 DNAL4O96015 105 aa8.35□□□□□ -1.07
CYSTM1-204ENST00000509789 ATXN8Q156A1 80 aa8.35□□□□□ -1.07
CYSTM1-204ENST00000509789 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.35□□□□□ -1.07
CYSTM1-204ENST00000509789 TCL1BO95988 128 aa8.34□□□□□ -1.07
CYSTM1-204ENST00000509789 TRACP01848 142 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 478.3 ms