RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 AHCTF1Q8WYP5 2266 aa1.68□□□□□ -2.14
SMARCA5-202ENST00000508573 KRTAP12-4P60329 112 aa1.67□□□□□ -2.14
SMARCA5-202ENST00000508573 KRTAP13-1Q8IUC0 172 aa1.67□□□□□ -2.14
SMARCA5-202ENST00000508573 C10orf95Q9H7T3 257 aa1.67□□□□□ -2.14
SMARCA5-202ENST00000508573 NFAT5O94916 1531 aa1.66□□□□□ -2.14
SMARCA5-202ENST00000508573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.66□□□□□ -2.14
SMARCA5-202ENST00000508573 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
SMARCA5-202ENST00000508573 LINC01546A6NGU7 62 aa1.66□□□□□ -2.14
SMARCA5-202ENST00000508573 MRPL33O75394 65 aaKnown RBP1.66□□□□□ -2.14
SMARCA5-202ENST00000508573 CACNA1EQ15878 2313 aa1.66□□□□□ -2.14
SMARCA5-202ENST00000508573 FXYD6P3P58550 94 aa1.65□□□□□ -2.15
SMARCA5-202ENST00000508573 DEFB119Q8N690 84 aa1.65□□□□□ -2.15
SMARCA5-202ENST00000508573 MRPL34Q9BQ48 92 aaKnown RBP1.65□□□□□ -2.15
SMARCA5-202ENST00000508573 NAV3Q8IVL0 2385 aa1.65□□□□□ -2.15
SMARCA5-202ENST00000508573 FAM208BQ5VWN6 2430 aa1.65□□□□□ -2.15
SMARCA5-202ENST00000508573 PRO3102Q9H379 93 aa1.64□□□□□ -2.15
SMARCA5-202ENST00000508573 CDKN2A-AS1Q9UH64 79 aa1.64□□□□□ -2.15
SMARCA5-202ENST00000508573 ATP7AQ04656 1500 aa1.63□□□□□ -2.15
SMARCA5-202ENST00000508573 LOC730098B7Z3J9 87 aa1.63□□□□□ -2.15
SMARCA5-202ENST00000508573 PIGYQ3MUY2 71 aa1.63□□□□□ -2.15
SMARCA5-202ENST00000508573 TIMM8BQ9Y5J9 83 aaPredicted RBP1.63□□□□□ -2.15
SMARCA5-202ENST00000508573 IQGAP1P46940 1657 aa1.63□□□□□ -2.15
SMARCA5-202ENST00000508573 FBN1P35555 2871 aaKnown RBP1.63□□□□□ -2.15
SMARCA5-202ENST00000508573 C4AP0C0L4 1744 aa1.63□□□□□ -2.15
SMARCA5-202ENST00000508573 SPINK4O60575 86 aa1.62□□□□□ -2.15
SMARCA5-202ENST00000508573 COX6A2Q02221 97 aa1.62□□□□□ -2.15
SMARCA5-202ENST00000508573 USMG5Q96IX5 58 aa1.62□□□□□ -2.15
SMARCA5-202ENST00000508573 C4BP0C0L5 1744 aa1.62□□□□□ -2.15
SMARCA5-202ENST00000508573 CDC42BPAQ5VT25 1732 aa1.62□□□□□ -2.15
SMARCA5-202ENST00000508573 KIF21BO75037 1637 aa1.62□□□□□ -2.15
SMARCA5-202ENST00000508573 CNFNQ9BYD5 112 aa1.61□□□□□ -2.15
SMARCA5-202ENST00000508573 DDX60Q8IY21 1712 aaKnown RBP1.6□□□□□ -2.15
SMARCA5-202ENST00000508573 H0YGX0 51 aa1.6□□□□□ -2.15
SMARCA5-202ENST00000508573 NDUFA3O95167 84 aa1.6□□□□□ -2.15
SMARCA5-202ENST00000508573 CNOT1A5YKK6 2376 aaKnown RBP1.6□□□□□ -2.15
SMARCA5-202ENST00000508573 OTOGLQ3ZCN5 2332 aa1.59□□□□□ -2.15
SMARCA5-202ENST00000508573 LINC00158P58513 81 aa1.59□□□□□ -2.15
SMARCA5-202ENST00000508573 LELP1Q5T871 98 aa1.59□□□□□ -2.15
SMARCA5-202ENST00000508573 Q8IZM0 81 aa1.59□□□□□ -2.15
SMARCA5-202ENST00000508573 PRO0255Q9UI72 69 aa1.59□□□□□ -2.15
SMARCA5-202ENST00000508573 H0YAA0 97 aa1.58□□□□□ -2.16
SMARCA5-202ENST00000508573 J3QKU1 62 aa1.57□□□□□ -2.16
SMARCA5-202ENST00000508573 SPINK9Q5DT21 86 aa1.57□□□□□ -2.16
SMARCA5-202ENST00000508573 COX6B2Q6YFQ2 88 aa1.57□□□□□ -2.16
SMARCA5-202ENST00000508573 SORL1Q92673 2214 aa1.56□□□□□ -2.16
SMARCA5-202ENST00000508573 CCL22O00626 93 aa1.56□□□□□ -2.16
SMARCA5-202ENST00000508573 BPTFQ12830 3046 aa1.56□□□□□ -2.16
SMARCA5-202ENST00000508573 SAMD9LQ8IVG5 1584 aa1.55□□□□□ -2.16
SMARCA5-202ENST00000508573 LMO7Q8WWI1 1683 aa1.55□□□□□ -2.16
SMARCA5-202ENST00000508573 A0A0D9SG42 100 aa1.54□□□□□ -2.16
SMARCA5-202ENST00000508573 Q6ZSA8 131 aa1.54□□□□□ -2.16
SMARCA5-202ENST00000508573 LINC00308Q8TCZ7 52 aa1.54□□□□□ -2.16
SMARCA5-202ENST00000508573 LYNX1G3V0Z9 82 aa1.53□□□□□ -2.16
SMARCA5-202ENST00000508573 PIEZO2Q9H5I5 2752 aa1.53□□□□□ -2.16
SMARCA5-202ENST00000508573 CRCT1Q9UGL9 99 aa1.53□□□□□ -2.16
SMARCA5-202ENST00000508573 SPRR1AP35321 89 aa1.52□□□□□ -2.17
SMARCA5-202ENST00000508573 PRB3Q04118 309 aaPredicted RBP1.52□□□□□ -2.17
SMARCA5-202ENST00000508573 DOPEY2Q9Y3R5 2298 aa1.52□□□□□ -2.17
SMARCA5-202ENST00000508573 RP1L1Q8IWN7 2480 aaPredicted RBP1.51□□□□□ -2.17
SMARCA5-202ENST00000508573 COL6A6A6NMZ7 2263 aa1.51□□□□□ -2.17
SMARCA5-202ENST00000508573 KRTAP12-3P60328 96 aa1.51□□□□□ -2.17
SMARCA5-202ENST00000508573 TMEM167BQ9NRX6 74 aa1.51□□□□□ -2.17
SMARCA5-202ENST00000508573 ROS1P08922 2347 aa1.5□□□□□ -2.17
SMARCA5-202ENST00000508573 H1FX-AS1Q4G0G2 97 aa1.5□□□□□ -2.17
SMARCA5-202ENST00000508573 Q5VSD8 79 aa1.5□□□□□ -2.17
SMARCA5-202ENST00000508573 APLNQ9ULZ1 77 aa1.5□□□□□ -2.17
SMARCA5-202ENST00000508573 SNRPGP62308 76 aaKnown RBP1.49□□□□□ -2.17
SMARCA5-202ENST00000508573 TFF3Q07654 80 aa1.49□□□□□ -2.17
SMARCA5-202ENST00000508573 KRTAP4-1Q9BYQ7 146 aa1.49□□□□□ -2.17
SMARCA5-202ENST00000508573 MROH2BQ7Z745 1585 aa1.48□□□□□ -2.17
SMARCA5-202ENST00000508573 PTPRZ1P23471 2315 aaPredicted RBP1.48□□□□□ -2.17
SMARCA5-202ENST00000508573 PLCE1Q9P212 2302 aa1.48□□□□□ -2.17
SMARCA5-202ENST00000508573 KRTAP10-4P60372 401 aaPredicted RBP1.48□□□□□ -2.17
SMARCA5-202ENST00000508573 MINOS1Q5TGZ0 78 aa1.48□□□□□ -2.17
SMARCA5-202ENST00000508573 DEFB105AQ8NG35 78 aa1.48□□□□□ -2.17
SMARCA5-202ENST00000508573 ALMS1Q8TCU4 4167 aa1.47□□□□□ -2.17
SMARCA5-202ENST00000508573 SPRR1BP22528 89 aa1.47□□□□□ -2.17
SMARCA5-202ENST00000508573 DUOX1Q9NRD9 1551 aa1.47□□□□□ -2.17
SMARCA5-202ENST00000508573 WFDC13Q8IUB5 93 aa1.46□□□□□ -2.18
SMARCA5-202ENST00000508573 C6orf48Q9UBA6 75 aa1.46□□□□□ -2.18
SMARCA5-202ENST00000508573 PTPRQQ9UMZ3 2332 aa1.45□□□□□ -2.18
SMARCA5-202ENST00000508573 USF3Q68DE3 2245 aa1.45□□□□□ -2.18
SMARCA5-202ENST00000508573 C2CD3Q4AC94 2353 aa1.44□□□□□ -2.18
SMARCA5-202ENST00000508573 IAPPP10997 89 aa1.44□□□□□ -2.18
SMARCA5-202ENST00000508573 ASH1LQ9NR48 2969 aaKnown RBP1.44□□□□□ -2.18
SMARCA5-202ENST00000508573 DEFB130BP0DP73 79 aa1.43□□□□□ -2.18
SMARCA5-202ENST00000508573 DEFB130AP0DP74 79 aa1.43□□□□□ -2.18
SMARCA5-202ENST00000508573 RPS27P42677 84 aaKnown RBP1.43□□□□□ -2.18
SMARCA5-202ENST00000508573 RPS27LQ71UM5 84 aaKnown RBP1.43□□□□□ -2.18
SMARCA5-202ENST00000508573 KLK9Q2XQG4 91 aa1.42□□□□□ -2.18
SMARCA5-202ENST00000508573 SMIM2Q9BVW6 85 aa1.42□□□□□ -2.18
SMARCA5-202ENST00000508573 CACNA1HO95180 2353 aa1.4□□□□□ -2.19
SMARCA5-202ENST00000508573 SPTBN2O15020 2390 aa1.39□□□□□ -2.19
SMARCA5-202ENST00000508573 NDUFA1O15239 70 aa1.39□□□□□ -2.19
SMARCA5-202ENST00000508573 ZNF462Q96JM2 2506 aa1.38□□□□□ -2.19
SMARCA5-202ENST00000508573 REV3LO60673 3130 aa1.36□□□□□ -2.19
SMARCA5-202ENST00000508573 KRTAP21-3Q3LHN1 58 aa1.36□□□□□ -2.19
SMARCA5-202ENST00000508573 FCGBPQ9Y6R7 5405 aaPredicted RBP1.36□□□□□ -2.19
SMARCA5-202ENST00000508573 SPTBN1Q01082 2364 aaKnown RBP1.35□□□□□ -2.19
SMARCA5-202ENST00000508573 WNK2Q9Y3S1 2297 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms