RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 HIST1H2BLQ99880 126 aa1.37□□□□□ -2.19
TRAPPC11-205ENST00000506426 CCDC32Q9BV29 185 aa1.37□□□□□ -2.19
TRAPPC11-205ENST00000506426 IMUPQ9GZP8 106 aa1.37□□□□□ -2.19
TRAPPC11-205ENST00000506426 EPDR1Q9UM22 224 aa1.37□□□□□ -2.19
TRAPPC11-205ENST00000506426 TRBV7-3A0A075B6L6 115 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 FXYD6-FXYD2A0A087WZ82 144 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 A0A096LNI7 61 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 MAP1LC3B2A6NCE7 125 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 F8W036 122 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 CRYGAP11844 174 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 UBE2G1P62253 170 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 EIF5AP63241 154 aaKnown RBP1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 COX6A2Q02221 97 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 KRTAP5-7Q6L8G8 165 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 Q6ZQT0 140 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 COA5Q86WW8 74 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 C9orf163Q8N9P6 203 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 DPH3Q96FX2 82 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 MAP1LC3BQ9GZQ8 125 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 DPH3P1Q9H4G8 78 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 TMEM167BQ9NRX6 74 aa1.36□□□□□ -2.19
TRAPPC11-205ENST00000506426 TRBV25-1A0A075B6N4 114 aa1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 TRBV10-1A0A0K0K1A3 114 aa1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 TRBV6-1A0A0K0K1D8 114 aa1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 CTXND1A0A1B0GTU2 59 aa1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 A0A1W2PRE2 83 aa1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 IGKV2-29A2NJV5 120 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 ARPC5O15511 151 aa1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 CNBPP62633 177 aaKnown RBP1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 Q0VG73 95 aa1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 CIRBPQ14011 172 aaKnown RBP1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 KRTAP13-4Q3LI77 160 aa1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 PCOTHQ58A44 107 aa1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 SPANXN1Q5VSR9 72 aa1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 FAM213BQ8TBF2 198 aa1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 RPL39LQ96EH5 51 aaKnown RBP1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 AP1S3Q96PC3 154 aa1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 AQP10Q96PS8 301 aa1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 PSMG3Q9BT73 122 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 NHP2Q9NX24 153 aaKnown RBP1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 PLAC8Q9NZF1 115 aa1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 SS18L2Q9UHA2 77 aa1.35□□□□□ -2.19
TRAPPC11-205ENST00000506426 IGHV1-24A0A0C4DH33 117 aa1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 M0QY20 66 aa1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 BCL2P10415 239 aa1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 RPL35P42766 123 aaKnown RBP1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 FOXA3P55318 350 aaPredicted RBP1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 KRTAP12-3P60328 96 aa1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 RAB4BP61018 213 aa1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 SERF2P84101 59 aa1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 IQCJQ1A5X6 159 aa1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 Q1T7F1 81 aa1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 SMIM20Q8N5G0 67 aa1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 S100ZQ8WXG8 99 aa1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 LINC01600Q96MT4 127 aa1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 BIN3Q9NQY0 253 aa1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 TNFSF18Q9UNG2 199 aa1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 ZFP30Q9Y2G7 519 aa1.34□□□□□ -2.19
TRAPPC11-205ENST00000506426 FSIP2Q5CZC0 6907 aa1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 GVQW2A0A096LPI5 108 aaPredicted RBP1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 BORCS7-ASMTA0A0B4J1R7 106 aa1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 TAX1BP3O14907 124 aa1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 CCL25O15444 150 aa1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 PFDN1O60925 122 aa1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 NCR2O95944 276 aa1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 IGLC6P0CF74 106 aa1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 KRTAP12-1P59990 96 aa1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 PHF5AQ7RTV0 110 aaKnown RBP1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 BAGE2Q86Y30 109 aa1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 SFT2D1Q8WV19 159 aa1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 CARD19Q96LW7 228 aa1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 TMEM242Q9NWH2 141 aa1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 GNG13Q9P2W3 67 aa1.33□□□□□ -2.2
TRAPPC11-205ENST00000506426 MT-ND6P03923 174 aa1.32□□□□□ -2.2
TRAPPC11-205ENST00000506426 CXCL1P09341 107 aa1.32□□□□□ -2.2
TRAPPC11-205ENST00000506426 GNG4P50150 75 aa1.32□□□□□ -2.2
TRAPPC11-205ENST00000506426 PKIAP61925 76 aa1.32□□□□□ -2.2
TRAPPC11-205ENST00000506426 C9orf116Q5BN46 136 aaPredicted RBP1.32□□□□□ -2.2
TRAPPC11-205ENST00000506426 C1orf137Q5JT78 98 aa1.32□□□□□ -2.2
TRAPPC11-205ENST00000506426 SPINK6Q6UWN8 80 aa1.32□□□□□ -2.2
TRAPPC11-205ENST00000506426 Q6ZUT4 128 aa1.32□□□□□ -2.2
TRAPPC11-205ENST00000506426 FP248Q71RG6 208 aaPredicted RBP1.32□□□□□ -2.2
TRAPPC11-205ENST00000506426 KCNRGQ8N5I3 272 aa1.32□□□□□ -2.2
TRAPPC11-205ENST00000506426 ZNF625Q96I27 306 aaPredicted RBP1.32□□□□□ -2.2
TRAPPC11-205ENST00000506426 BATF3Q9NR55 127 aa1.32□□□□□ -2.2
TRAPPC11-205ENST00000506426 MUC17Q685J3 4493 aa1.31□□□□□ -2.2
TRAPPC11-205ENST00000506426 TRAV13-1A0A0B4J241 112 aa1.31□□□□□ -2.2
TRAPPC11-205ENST00000506426 TRAV1-1A0A0B4J248 108 aa1.31□□□□□ -2.2
TRAPPC11-205ENST00000506426 IGHV1-58A0A0C4DH39 117 aa1.31□□□□□ -2.2
TRAPPC11-205ENST00000506426 TRBV6-5A0A0K0K1A5 114 aa1.31□□□□□ -2.2
TRAPPC11-205ENST00000506426 LINC00959A0A1B0GUT2 108 aa1.31□□□□□ -2.2
TRAPPC11-205ENST00000506426 BAALC-AS2P0C853 105 aa1.31□□□□□ -2.2
TRAPPC11-205ENST00000506426 UBE2BP63146 152 aa1.31□□□□□ -2.2
TRAPPC11-205ENST00000506426 SPAG11BQ08648 103 aa1.31□□□□□ -2.2
TRAPPC11-205ENST00000506426 LINC00299Q6ZSB3 139 aa1.31□□□□□ -2.2
TRAPPC11-205ENST00000506426 C5orf38Q86SI9 138 aa1.31□□□□□ -2.2
TRAPPC11-205ENST00000506426 RETNLBQ9BQ08 111 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms