RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 MUC2Q02817 5179 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 FAT3Q8TDW7 4589 aa1.39□□□□□ -2.19
RFC1-209ENST00000504974 IGHV3-64A0A075B6Q5 118 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 TRAV9-1A0A075B6T8 112 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 IGHV1-58A0A0C4DH39 117 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 LINC00959A0A1B0GUT2 108 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 TMEM218A2RU14 115 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 C1orf196B1AJZ1 125 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 K7EMI3 77 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 CCL25O15444 150 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 NPYP01303 97 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 S100PP25815 95 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 IFI27P40305 119 aaPredicted RBP1.38□□□□□ -2.19
RFC1-209ENST00000504974 XCL1P47992 114 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 MP68P56378 58 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 CD164Q04900 197 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 CIRBPQ14011 172 aaKnown RBP1.38□□□□□ -2.19
RFC1-209ENST00000504974 RHEBQ15382 184 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 SS18Q15532 418 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 C9orf163Q8N9P6 203 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 SPACA4Q8TDM5 124 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 CARD19Q96LW7 228 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 PRELID3AQ96N28 172 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 C20orf166-AS1Q96NR2 134 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 TIMM21Q9BVV7 248 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 SEC11CQ9BY50 192 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 MAP1LC3AQ9H492 121 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 CDC42SE2Q9NRR3 84 aa1.38□□□□□ -2.19
RFC1-209ENST00000504974 TRAV13-1A0A0B4J241 112 aa1.37□□□□□ -2.19
RFC1-209ENST00000504974 COX7A2LO14548 114 aa1.37□□□□□ -2.19
RFC1-209ENST00000504974 SLC25A20O43772 301 aa1.37□□□□□ -2.19
RFC1-209ENST00000504974 APOMO95445 188 aa1.37□□□□□ -2.19
RFC1-209ENST00000504974 MT-ND6P03923 174 aa1.37□□□□□ -2.19
RFC1-209ENST00000504974 RPL39P62891 51 aaKnown RBP1.37□□□□□ -2.19
RFC1-209ENST00000504974 MRPS36P82909 103 aaKnown RBP1.37□□□□□ -2.19
RFC1-209ENST00000504974 SPAG11BQ08648 103 aa1.37□□□□□ -2.19
RFC1-209ENST00000504974 NDUFA5Q16718 116 aa1.37□□□□□ -2.19
RFC1-209ENST00000504974 C10orf91Q5T1B1 145 aa1.37□□□□□ -2.19
RFC1-209ENST00000504974 SDIM1Q6ZPB5 146 aa1.37□□□□□ -2.19
RFC1-209ENST00000504974 Q8N8P6 123 aa1.37□□□□□ -2.19
RFC1-209ENST00000504974 TMEM141Q96I45 108 aa1.37□□□□□ -2.19
RFC1-209ENST00000504974 C2orf88Q9BSF0 95 aa1.37□□□□□ -2.19
RFC1-209ENST00000504974 NXT2Q9NPJ8 142 aaKnown RBP1.37□□□□□ -2.19
RFC1-209ENST00000504974 LINC00474Q9P2X8 69 aa1.37□□□□□ -2.19
RFC1-209ENST00000504974 CYSLTR1Q9Y271 337 aa1.37□□□□□ -2.19
RFC1-209ENST00000504974 A0A096LNI7 61 aa1.36□□□□□ -2.19
RFC1-209ENST00000504974 TGIF2-C20orf24A0A0A6YYL0 155 aa1.36□□□□□ -2.19
RFC1-209ENST00000504974 LINC01546A6NGU7 62 aa1.36□□□□□ -2.19
RFC1-209ENST00000504974 LINC01549A6NIU2 74 aa1.36□□□□□ -2.19
RFC1-209ENST00000504974 G0S2P27469 103 aa1.36□□□□□ -2.19
RFC1-209ENST00000504974 RPL37AP61513 92 aaKnown RBP1.36□□□□□ -2.19
RFC1-209ENST00000504974 HERVK_113P63121 156 aa1.36□□□□□ -2.19
RFC1-209ENST00000504974 SEC11AP67812 179 aa1.36□□□□□ -2.19
RFC1-209ENST00000504974 COX6A2Q02221 97 aa1.36□□□□□ -2.19
RFC1-209ENST00000504974 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
RFC1-209ENST00000504974 C5orf38Q86SI9 138 aa1.36□□□□□ -2.19
RFC1-209ENST00000504974 SVBPQ8N300 66 aa1.36□□□□□ -2.19
RFC1-209ENST00000504974 TOMM6Q96B49 74 aa1.36□□□□□ -2.19
RFC1-209ENST00000504974 AMELXQ99217 191 aa1.36□□□□□ -2.19
RFC1-209ENST00000504974 GNB1LQ9BYB4 327 aa1.36□□□□□ -2.19
RFC1-209ENST00000504974 MRPL35Q9NZE8 188 aaKnown RBP1.36□□□□□ -2.19
RFC1-209ENST00000504974 PLAC8Q9NZF1 115 aa1.36□□□□□ -2.19
RFC1-209ENST00000504974 TNXBP22105 4242 aa1.35□□□□□ -2.19
RFC1-209ENST00000504974 TRBV30A0A0K0K1B3 111 aa1.35□□□□□ -2.19
RFC1-209ENST00000504974 LOC107984640A0A0U1RRK4 108 aa1.35□□□□□ -2.19
RFC1-209ENST00000504974 IGIPA6NJ69 53 aa1.35□□□□□ -2.19
RFC1-209ENST00000504974 C8orf87E5RJ46 101 aa1.35□□□□□ -2.19
RFC1-209ENST00000504974 NDUFA1O15239 70 aa1.35□□□□□ -2.19
RFC1-209ENST00000504974 APOC3P02656 99 aa1.35□□□□□ -2.19
RFC1-209ENST00000504974 MT1HL1P0DM35 61 aa1.35□□□□□ -2.19
RFC1-209ENST00000504974 UBE2D1P51668 147 aa1.35□□□□□ -2.19
RFC1-209ENST00000504974 KRTAP12-4P60329 112 aa1.35□□□□□ -2.19
RFC1-209ENST00000504974 KRTAP10-4P60372 401 aaPredicted RBP1.35□□□□□ -2.19
RFC1-209ENST00000504974 FABP9Q0Z7S8 132 aa1.35□□□□□ -2.19
RFC1-209ENST00000504974 Q6ZRU5 148 aa1.35□□□□□ -2.19
RFC1-209ENST00000504974 Q8IZM0 81 aa1.35□□□□□ -2.19
RFC1-209ENST00000504974 LINC00526Q96FQ7 95 aa1.35□□□□□ -2.19
RFC1-209ENST00000504974 PACRGQ96M98 296 aaPredicted RBP1.35□□□□□ -2.19
RFC1-209ENST00000504974 SMCO4Q9NRQ5 59 aa1.35□□□□□ -2.19
RFC1-209ENST00000504974 DNAH8Q96JB1 4490 aa1.34□□□□□ -2.19
RFC1-209ENST00000504974 TINCRA0A1B0GVN0 87 aa1.34□□□□□ -2.19
RFC1-209ENST00000504974 HBDP02042 147 aa1.34□□□□□ -2.19
RFC1-209ENST00000504974 RAB5BP61020 215 aa1.34□□□□□ -2.19
RFC1-209ENST00000504974 CKS1BP61024 79 aa1.34□□□□□ -2.19
RFC1-209ENST00000504974 C9orf116Q5BN46 136 aaPredicted RBP1.34□□□□□ -2.19
RFC1-209ENST00000504974 UNQ6190/PRO20217Q6UXQ8 127 aa1.34□□□□□ -2.19
RFC1-209ENST00000504974 C18orf32Q8TCD1 76 aa1.34□□□□□ -2.19
RFC1-209ENST00000504974 DPH3Q96FX2 82 aa1.34□□□□□ -2.19
RFC1-209ENST00000504974 SCGB3A1Q96QR1 104 aa1.34□□□□□ -2.19
RFC1-209ENST00000504974 TOMM7Q9P0U1 55 aa1.34□□□□□ -2.19
RFC1-209ENST00000504974 C6orf48Q9UBA6 75 aa1.34□□□□□ -2.19
RFC1-209ENST00000504974 F8VRH5 84 aa1.33□□□□□ -2.2
RFC1-209ENST00000504974 H3BRM9 83 aa1.33□□□□□ -2.2
RFC1-209ENST00000504974 SPINK8P0C7L1 97 aa1.33□□□□□ -2.2
RFC1-209ENST00000504974 LINC00614P0C842 121 aa1.33□□□□□ -2.2
RFC1-209ENST00000504974 IGLC3P0DOY3 106 aa1.33□□□□□ -2.2
RFC1-209ENST00000504974 PMCHL1Q16048 86 aa1.33□□□□□ -2.2
RFC1-209ENST00000504974 SFTA2Q6UW10 78 aa1.33□□□□□ -2.2
RFC1-209ENST00000504974 SPINK6Q6UWN8 80 aa1.33□□□□□ -2.2
RFC1-209ENST00000504974 C2orf82Q6UX34 121 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms