RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SPINK6Q6UWN8 80 aa0.53□□□□□ -2.32
HMGB1P35-201ENST00000503360 ENHOQ6UWT2 76 aa0.53□□□□□ -2.32
HMGB1P35-201ENST00000503360 SMIM5Q71RC9 77 aa0.53□□□□□ -2.32
HMGB1P35-201ENST00000503360 UBL5Q9BZL1 73 aa0.53□□□□□ -2.32
HMGB1P35-201ENST00000503360 URB1O60287 2271 aaKnown RBP0.53□□□□□ -2.33
HMGB1P35-201ENST00000503360 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.52□□□□□ -2.33
HMGB1P35-201ENST00000503360 SPINK4O60575 86 aa0.52□□□□□ -2.33
HMGB1P35-201ENST00000503360 MRPL33O75394 65 aaKnown RBP0.52□□□□□ -2.33
HMGB1P35-201ENST00000503360 CDKN2A-AS1Q9UH64 79 aa0.52□□□□□ -2.33
HMGB1P35-201ENST00000503360 APLNQ9ULZ1 77 aa0.52□□□□□ -2.33
HMGB1P35-201ENST00000503360 NOTCH1P46531 2555 aa0.52□□□□□ -2.33
HMGB1P35-201ENST00000503360 TJP1Q07157 1748 aa0.52□□□□□ -2.33
HMGB1P35-201ENST00000503360 MROH2AA6NES4 1674 aa0.51□□□□□ -2.33
HMGB1P35-201ENST00000503360 C3P01024 1663 aa0.51□□□□□ -2.33
HMGB1P35-201ENST00000503360 CACNA1EQ15878 2313 aa0.51□□□□□ -2.33
HMGB1P35-201ENST00000503360 C2CD3Q4AC94 2353 aa0.51□□□□□ -2.33
HMGB1P35-201ENST00000503360 DEFB105AQ8NG35 78 aa0.51□□□□□ -2.33
HMGB1P35-201ENST00000503360 TNRC6CQ9HCJ0 1690 aaKnown RBP0.51□□□□□ -2.33
HMGB1P35-201ENST00000503360 DEFB131BA0A096LNP1 70 aa0.5□□□□□ -2.33
HMGB1P35-201ENST00000503360 LINC01549A6NIU2 74 aa0.5□□□□□ -2.33
HMGB1P35-201ENST00000503360 KCNQ1DNQ9H478 68 aa0.5□□□□□ -2.33
HMGB1P35-201ENST00000503360 TTC28Q96AY4 2481 aa0.5□□□□□ -2.33
HMGB1P35-201ENST00000503360 CNOT1A5YKK6 2376 aaKnown RBP0.5□□□□□ -2.33
HMGB1P35-201ENST00000503360 PTPRZ1P23471 2315 aaPredicted RBP0.5□□□□□ -2.33
HMGB1P35-201ENST00000503360 PIEZO2Q9H5I5 2752 aa0.5□□□□□ -2.33
HMGB1P35-201ENST00000503360 SPTBN2O15020 2390 aa0.49□□□□□ -2.33
HMGB1P35-201ENST00000503360 F8P00451 2351 aa0.49□□□□□ -2.33
HMGB1P35-201ENST00000503360 ABCA10Q8WWZ4 1543 aa0.49□□□□□ -2.33
HMGB1P35-201ENST00000503360 POLQO75417 2590 aa0.49□□□□□ -2.33
HMGB1P35-201ENST00000503360 NDUFA3O95167 84 aa0.49□□□□□ -2.33
HMGB1P35-201ENST00000503360 DEFB109BQ30KR1 87 aa0.49□□□□□ -2.33
HMGB1P35-201ENST00000503360 H1FX-AS1Q4G0G2 97 aa0.49□□□□□ -2.33
HMGB1P35-201ENST00000503360 KRTAP19-3Q7Z4W3 81 aa0.49□□□□□ -2.33
HMGB1P35-201ENST00000503360 FXYD6Q9H0Q3 95 aa0.49□□□□□ -2.33
HMGB1P35-201ENST00000503360 PRO3102Q9H379 93 aa0.49□□□□□ -2.33
HMGB1P35-201ENST00000503360 DDX60LQ5H9U9 1706 aaKnown RBP0.49□□□□□ -2.33
HMGB1P35-201ENST00000503360 USF3Q68DE3 2245 aa0.49□□□□□ -2.33
HMGB1P35-201ENST00000503360 SYCP2Q9BX26 1530 aa0.48□□□□□ -2.33
HMGB1P35-201ENST00000503360 ETDCA0A1B0GVM5 59 aa0.48□□□□□ -2.33
HMGB1P35-201ENST00000503360 SPINK1P00995 79 aa0.48□□□□□ -2.33
HMGB1P35-201ENST00000503360 DEFB114Q30KQ6 69 aa0.48□□□□□ -2.33
HMGB1P35-201ENST00000503360 FBN2P35556 2912 aa0.48□□□□□ -2.33
HMGB1P35-201ENST00000503360 CLASP1Q7Z460 1538 aa0.48□□□□□ -2.33
HMGB1P35-201ENST00000503360 CROCC2H7BZ55 1655 aa0.47□□□□□ -2.33
HMGB1P35-201ENST00000503360 K7EMI3 77 aa0.47□□□□□ -2.33
HMGB1P35-201ENST00000503360 LINC00158P58513 81 aa0.47□□□□□ -2.33
HMGB1P35-201ENST00000503360 KLK9Q2XQG4 91 aa0.47□□□□□ -2.33
HMGB1P35-201ENST00000503360 WFDC13Q8IUB5 93 aa0.47□□□□□ -2.33
HMGB1P35-201ENST00000503360 PRXQ9BXM0 1461 aa0.47□□□□□ -2.33
HMGB1P35-201ENST00000503360 SYNE2Q8WXH0 6885 aaKnown RBP0.46□□□□□ -2.34
HMGB1P35-201ENST00000503360 PTPRQQ9UMZ3 2332 aa0.46□□□□□ -2.34
HMGB1P35-201ENST00000503360 PRH1P02810 166 aa0.46□□□□□ -2.34
HMGB1P35-201ENST00000503360 CRIP1P50238 77 aa0.46□□□□□ -2.34
HMGB1P35-201ENST00000503360 SERF2P84101 59 aa0.46□□□□□ -2.34
HMGB1P35-201ENST00000503360 KMT2DO14686 5537 aa0.46□□□□□ -2.34
HMGB1P35-201ENST00000503360 TNCP24821 2201 aa0.46□□□□□ -2.34
HMGB1P35-201ENST00000503360 C4AP0C0L4 1744 aa0.46□□□□□ -2.34
HMGB1P35-201ENST00000503360 C4BP0C0L5 1744 aa0.46□□□□□ -2.34
HMGB1P35-201ENST00000503360 EEA1Q15075 1411 aa0.46□□□□□ -2.34
HMGB1P35-201ENST00000503360 PKDREJQ9NTG1 2253 aa0.45□□□□□ -2.34
HMGB1P35-201ENST00000503360 CELSR2Q9HCU4 2923 aa0.45□□□□□ -2.34
HMGB1P35-201ENST00000503360 GVINP1Q7Z2Y8 2422 aa0.45□□□□□ -2.34
HMGB1P35-201ENST00000503360 KRTAP2-3P0C7H8 128 aa0.45□□□□□ -2.34
HMGB1P35-201ENST00000503360 LELP1Q5T871 98 aa0.45□□□□□ -2.34
HMGB1P35-201ENST00000503360 SMR3AQ99954 134 aa0.45□□□□□ -2.34
HMGB1P35-201ENST00000503360 KRTAP2-4Q9BYR9 128 aa0.45□□□□□ -2.34
HMGB1P35-201ENST00000503360 KRTAP2-1Q9BYU5 128 aa0.45□□□□□ -2.34
HMGB1P35-201ENST00000503360 ABCA12Q86UK0 2595 aa0.45□□□□□ -2.34
HMGB1P35-201ENST00000503360 FRAS1Q86XX4 4008 aa0.44□□□□□ -2.34
HMGB1P35-201ENST00000503360 BDP1A6H8Y1 2624 aa0.44□□□□□ -2.34
HMGB1P35-201ENST00000503360 SPTBN1Q01082 2364 aaKnown RBP0.44□□□□□ -2.34
HMGB1P35-201ENST00000503360 FCER1GP30273 86 aa0.44□□□□□ -2.34
HMGB1P35-201ENST00000503360 NCBP2-AS2Q69YL0 99 aa0.44□□□□□ -2.34
HMGB1P35-201ENST00000503360 NMES1Q9C002 83 aa0.44□□□□□ -2.34
HMGB1P35-201ENST00000503360 U3KQA8 63 aa0.44□□□□□ -2.34
HMGB1P35-201ENST00000503360 ZNF292O60281 2723 aa0.44□□□□□ -2.34
HMGB1P35-201ENST00000503360 NRXN3Q9Y4C0 1643 aa0.44□□□□□ -2.34
HMGB1P35-201ENST00000503360 PIEZO1Q92508 2521 aa0.44□□□□□ -2.34
HMGB1P35-201ENST00000503360 CSMD3Q7Z407 3707 aa0.44□□□□□ -2.34
HMGB1P35-201ENST00000503360 TPRP12270 2363 aaKnown RBP0.43□□□□□ -2.34
HMGB1P35-201ENST00000503360 FANCD2Q9BXW9 1451 aa0.43□□□□□ -2.34
HMGB1P35-201ENST00000503360 LYNX1G3V0Z9 82 aa0.43□□□□□ -2.34
HMGB1P35-201ENST00000503360 ANK2Q01484 3957 aa0.43□□□□□ -2.34
HMGB1P35-201ENST00000503360 APCP25054 2843 aa0.43□□□□□ -2.34
HMGB1P35-201ENST00000503360 ZNF469Q96JG9 3925 aaPredicted RBP0.43□□□□□ -2.34
HMGB1P35-201ENST00000503360 DEPDC5O75140 1603 aa0.42□□□□□ -2.34
HMGB1P35-201ENST00000503360 UGGT1Q9NYU2 1555 aa0.42□□□□□ -2.34
HMGB1P35-201ENST00000503360 CPS1P31327 1500 aa0.42□□□□□ -2.34
HMGB1P35-201ENST00000503360 CHD9Q3L8U1 2897 aa0.42□□□□□ -2.34
HMGB1P35-201ENST00000503360 AKAP6Q13023 2319 aa0.42□□□□□ -2.34
HMGB1P35-201ENST00000503360 ADCY10Q96PN6 1610 aa0.42□□□□□ -2.34
HMGB1P35-201ENST00000503360 TOGARAM1Q9Y4F4 1720 aa0.41□□□□□ -2.34
HMGB1P35-201ENST00000503360 H0YAA0 97 aa0.41□□□□□ -2.34
HMGB1P35-201ENST00000503360 M0R1W7 72 aa0.41□□□□□ -2.34
HMGB1P35-201ENST00000503360 A0A1B0GUL6 1792 aa0.41□□□□□ -2.34
HMGB1P35-201ENST00000503360 LOC730098B7Z3J9 87 aa0.4□□□□□ -2.35
HMGB1P35-201ENST00000503360 FSIP2Q5CZC0 6907 aa0.4□□□□□ -2.35
HMGB1P35-201ENST00000503360 ANKRD36CQ5JPF3 1778 aa0.4□□□□□ -2.35
HMGB1P35-201ENST00000503360 AGLP35573 1532 aa0.39□□□□□ -2.35
HMGB1P35-201ENST00000503360 ABCA5Q8WWZ7 1642 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms