RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 LINC00467Q9BRT7 94 aa1.87□□□□□ -2.11
PROM1-203ENST00000502943 SPXQ9BT56 116 aa1.87□□□□□ -2.11
PROM1-203ENST00000502943 SPANXA1Q9NS26 97 aa1.87□□□□□ -2.11
PROM1-203ENST00000502943 DHRS4-AS1Q9P1J3 65 aa1.87□□□□□ -2.11
PROM1-203ENST00000502943 NDUFA12Q9UI09 145 aa1.87□□□□□ -2.11
PROM1-203ENST00000502943 UBE2D4Q9Y2X8 147 aa1.87□□□□□ -2.11
PROM1-203ENST00000502943 C22orf24Q9Y442 160 aa1.87□□□□□ -2.11
PROM1-203ENST00000502943 HMCN2Q8NDA2 5059 aa1.87□□□□□ -2.11
PROM1-203ENST00000502943 IGHV3-53P01767 116 aa1.86□□□□□ -2.11
PROM1-203ENST00000502943 PRM2P04554 102 aa1.86□□□□□ -2.11
PROM1-203ENST00000502943 ACYP1P07311 99 aa1.86□□□□□ -2.11
PROM1-203ENST00000502943 COX6A2Q02221 97 aa1.86□□□□□ -2.11
PROM1-203ENST00000502943 SPINK13Q1W4C9 94 aa1.86□□□□□ -2.11
PROM1-203ENST00000502943 TTC32Q5I0X7 151 aa1.86□□□□□ -2.11
PROM1-203ENST00000502943 C9orf129Q5T035 196 aaKnown RBP1.86□□□□□ -2.11
PROM1-203ENST00000502943 SOSTDC1Q6X4U4 206 aa1.86□□□□□ -2.11
PROM1-203ENST00000502943 LINC00308Q8TCZ7 52 aa1.86□□□□□ -2.11
PROM1-203ENST00000502943 SMCR5Q8TEV8 140 aa1.86□□□□□ -2.11
PROM1-203ENST00000502943 TMEM101Q96IK0 257 aa1.86□□□□□ -2.11
PROM1-203ENST00000502943 DNAJC30Q96LL9 226 aa1.86□□□□□ -2.11
PROM1-203ENST00000502943 LINC01587Q99440 93 aa1.86□□□□□ -2.11
PROM1-203ENST00000502943 IMUPQ9GZP8 106 aa1.86□□□□□ -2.11
PROM1-203ENST00000502943 CDKN2A-AS1Q9UH64 79 aa1.86□□□□□ -2.11
PROM1-203ENST00000502943 LRP1Q07954 4544 aaKnown RBP1.86□□□□□ -2.11
PROM1-203ENST00000502943 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.85□□□□□ -2.11
PROM1-203ENST00000502943 IGHV3OR16-12A0A075B7B8 117 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 TRAV25A0A0B4J276 109 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 A0A0U1RQV1 116 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 IGKV2-29A2NJV5 120 aaPredicted RBP1.85□□□□□ -2.11
PROM1-203ENST00000502943 KNCNA6PVL3 124 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 F5H768 121 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 PANO1I0J062 215 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 COX7A2LO14548 114 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 RS1O15537 224 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 TRACP01848 142 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 COX6CP09669 75 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 MIFP14174 115 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 CXCL5P42830 114 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 CMC4P56277 68 aaPredicted RBP1.85□□□□□ -2.11
PROM1-203ENST00000502943 SNRPD3P62318 126 aaKnown RBP1.85□□□□□ -2.11
PROM1-203ENST00000502943 RNASE13Q5GAN3 156 aaKnown RBP1.85□□□□□ -2.11
PROM1-203ENST00000502943 MEIG1Q5JSS6 88 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 FAM222AQ5U5X8 452 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 C5orf38Q86SI9 138 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 C11orf72Q8NBR9 251 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 ZNF625Q96I27 306 aaPredicted RBP1.85□□□□□ -2.11
PROM1-203ENST00000502943 TMEM126AQ9H061 195 aa1.85□□□□□ -2.11
PROM1-203ENST00000502943 CSDC2Q9Y534 153 aaKnown RBP1.85□□□□□ -2.11
PROM1-203ENST00000502943 IGHV3-73A0A0B4J1V6 119 aa1.84□□□□□ -2.11
PROM1-203ENST00000502943 FUSP35637 526 aaKnown RBP eCLIP1.84□□□□□ -2.11
PROM1-203ENST00000502943 CCL18P55774 89 aa1.84□□□□□ -2.11
PROM1-203ENST00000502943 NPC2P61916 151 aa1.84□□□□□ -2.11
PROM1-203ENST00000502943 HIST1H4AP62805 103 aaKnown RBP1.84□□□□□ -2.11
PROM1-203ENST00000502943 HERV-K104P63124 156 aa1.84□□□□□ -2.11
PROM1-203ENST00000502943 HAMPP81172 84 aa1.84□□□□□ -2.11
PROM1-203ENST00000502943 CIRBPQ14011 172 aaKnown RBP1.84□□□□□ -2.11
PROM1-203ENST00000502943 NTM-AS1Q6ZSK4 140 aa1.84□□□□□ -2.11
PROM1-203ENST00000502943 LINC00643Q86TS7 51 aa1.84□□□□□ -2.11
PROM1-203ENST00000502943 DAND5Q8N907 189 aa1.84□□□□□ -2.11
PROM1-203ENST00000502943 Q8N9L7 120 aa1.84□□□□□ -2.11
PROM1-203ENST00000502943 OBSCN-AS1Q96MR7 158 aa1.84□□□□□ -2.11
PROM1-203ENST00000502943 Q9H8V8 135 aa1.84□□□□□ -2.11
PROM1-203ENST00000502943 TNXBP22105 4242 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 IGKV2-28A0A075B6P5 120 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 PLAC8L1A1L4L8 177 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 IGKV2D-28P01615 120 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 ATP5G1P05496 136 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 BAALC-AS2P0C853 105 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 SPART-AS1P0CW21 52 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 LINC00694P0DN24 101 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 HTN3P15516 51 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 RPL28P46779 137 aaKnown RBP1.83□□□□□ -2.12
PROM1-203ENST00000502943 DEFB131AP59861 70 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 HERVK_113P63121 156 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 DAZ2Q13117 558 aaKnown RBP1.83□□□□□ -2.12
PROM1-203ENST00000502943 DAZ4Q86SG3 579 aaKnown RBP1.83□□□□□ -2.12
PROM1-203ENST00000502943 SMIM20Q8N5G0 67 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 C3orf22Q8N5N4 141 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 Q8NAQ8 132 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 COPS9Q8WXC6 57 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 LINC00526Q96FQ7 95 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 DAZ3Q9NR90 486 aaKnown RBP1.83□□□□□ -2.12
PROM1-203ENST00000502943 CDC42SE2Q9NRR3 84 aa1.83□□□□□ -2.12
PROM1-203ENST00000502943 TRAV13-2A0A0B4J235 113 aa1.82□□□□□ -2.12
PROM1-203ENST00000502943 TRBV10-1A0A0K0K1A3 114 aa1.82□□□□□ -2.12
PROM1-203ENST00000502943 FAM236AA0A1B0GUQ0 79 aa1.82□□□□□ -2.12
PROM1-203ENST00000502943 FAM236BA0A1B0GV22 79 aa1.82□□□□□ -2.12
PROM1-203ENST00000502943 UQCRQO14949 82 aa1.82□□□□□ -2.12
PROM1-203ENST00000502943 INSP01308 110 aa1.82□□□□□ -2.12
PROM1-203ENST00000502943 CRYGAP11844 174 aa1.82□□□□□ -2.12
PROM1-203ENST00000502943 COX7CP15954 63 aa1.82□□□□□ -2.12
PROM1-203ENST00000502943 Q6JHZ5 121 aa1.82□□□□□ -2.12
PROM1-203ENST00000502943 CFAP161Q6P656 301 aa1.82□□□□□ -2.12
PROM1-203ENST00000502943 STHQ8IWL8 128 aa1.82□□□□□ -2.12
PROM1-203ENST00000502943 C1orf158Q8N1D5 194 aa1.82□□□□□ -2.12
PROM1-203ENST00000502943 LINC00337Q8N6G1 96 aa1.82□□□□□ -2.12
PROM1-203ENST00000502943 LRP2P98164 4655 aa1.81□□□□□ -2.12
PROM1-203ENST00000502943 IGHV3OR16-9A0A0B4J2B5 98 aa1.81□□□□□ -2.12
PROM1-203ENST00000502943 A0A1B0GX51 115 aa1.81□□□□□ -2.12
PROM1-203ENST00000502943 H0YGX0 51 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms