RNA–Protein interactions for RNA: ENST00000502478.1

CCSER1-202, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 744 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-202ENST00000502478 SMKR1H3BMG3 65 aa2.32□□□□□ -2.04
CCSER1-202ENST00000502478 MRPS12O15235 138 aaKnown RBP2.32□□□□□ -2.04
CCSER1-202ENST00000502478 LTAP01374 205 aa2.32□□□□□ -2.04
CCSER1-202ENST00000502478 HBDP02042 147 aa2.32□□□□□ -2.04
CCSER1-202ENST00000502478 HAMPP81172 84 aa2.32□□□□□ -2.04
CCSER1-202ENST00000502478 FAM104BQ5XKR9 115 aa2.32□□□□□ -2.04
CCSER1-202ENST00000502478 C2orf82Q6UX34 121 aa2.32□□□□□ -2.04
CCSER1-202ENST00000502478 Q8TAT8 98 aa2.32□□□□□ -2.04
CCSER1-202ENST00000502478 FXYD5Q96DB9 178 aa2.32□□□□□ -2.04
CCSER1-202ENST00000502478 RBM12B-AS1Q9P1G2 102 aa2.32□□□□□ -2.04
CCSER1-202ENST00000502478 VPS13DQ5THJ4 4388 aa2.31□□□□□ -2.04
CCSER1-202ENST00000502478 DNAH6Q9C0G6 4158 aa2.31□□□□□ -2.04
CCSER1-202ENST00000502478 A0A096LNJ9 63 aa2.31□□□□□ -2.04
CCSER1-202ENST00000502478 A0A0B4J2C4 111 aa2.31□□□□□ -2.04
CCSER1-202ENST00000502478 TRGV4A0A0C4DH28 118 aa2.31□□□□□ -2.04
CCSER1-202ENST00000502478 NDUFS5O43920 106 aa2.31□□□□□ -2.04
CCSER1-202ENST00000502478 TIMM17BO60830 172 aa2.31□□□□□ -2.04
CCSER1-202ENST00000502478 SMR3BP02814 79 aaPredicted RBP2.31□□□□□ -2.04
CCSER1-202ENST00000502478 HIST1H4AP62805 103 aaKnown RBP2.31□□□□□ -2.04
CCSER1-202ENST00000502478 PRR9Q5T870 116 aa2.31□□□□□ -2.04
CCSER1-202ENST00000502478 SCGB1D4Q6XE38 83 aa2.31□□□□□ -2.04
CCSER1-202ENST00000502478 ZFP2Q6ZN57 461 aa2.31□□□□□ -2.04
CCSER1-202ENST00000502478 C5orf38Q86SI9 138 aa2.31□□□□□ -2.04
CCSER1-202ENST00000502478 KTN1-AS1Q86SY8 53 aa2.31□□□□□ -2.04
CCSER1-202ENST00000502478 LYPD1Q8N2G4 141 aa2.31□□□□□ -2.04
CCSER1-202ENST00000502478 UPK3BQ9BT76 320 aa2.31□□□□□ -2.04
CCSER1-202ENST00000502478 RPP21Q9H633 154 aaKnown RBP2.31□□□□□ -2.04
CCSER1-202ENST00000502478 ICOSQ9Y6W8 199 aa2.31□□□□□ -2.04
CCSER1-202ENST00000502478 IGLV4-69A0A075B6H9 119 aa2.3□□□□□ -2.04
CCSER1-202ENST00000502478 IGHV3-73A0A0B4J1V6 119 aa2.3□□□□□ -2.04
CCSER1-202ENST00000502478 TEX49A0A1B0GTD5 131 aa2.3□□□□□ -2.04
CCSER1-202ENST00000502478 LINC01546A6NGU7 62 aa2.3□□□□□ -2.04
CCSER1-202ENST00000502478 HIGD1CA8MV81 97 aa2.3□□□□□ -2.04
CCSER1-202ENST00000502478 UBE2L6O14933 153 aa2.3□□□□□ -2.04
CCSER1-202ENST00000502478 INAFM2P0DMQ5 153 aa2.3□□□□□ -2.04
CCSER1-202ENST00000502478 IFI27P40305 119 aaPredicted RBP2.3□□□□□ -2.04
CCSER1-202ENST00000502478 UBE2D1P51668 147 aa2.3□□□□□ -2.04
CCSER1-202ENST00000502478 RBM3P98179 157 aaKnown RBP2.3□□□□□ -2.04
CCSER1-202ENST00000502478 PDE6HQ13956 83 aa2.3□□□□□ -2.04
CCSER1-202ENST00000502478 SFTA2Q6UW10 78 aa2.3□□□□□ -2.04
CCSER1-202ENST00000502478 FP248Q71RG6 208 aaPredicted RBP2.3□□□□□ -2.04
CCSER1-202ENST00000502478 Q86TA4 180 aa2.3□□□□□ -2.04
CCSER1-202ENST00000502478 TMEM75Q8N9X5 138 aa2.3□□□□□ -2.04
CCSER1-202ENST00000502478 CNFNQ9BYD5 112 aa2.3□□□□□ -2.04
CCSER1-202ENST00000502478 DNAH2Q9P225 4427 aa2.3□□□□□ -2.04
CCSER1-202ENST00000502478 DNAH17Q9UFH2 4485 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 IGKV2D-26A0A0A0MRZ7 120 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 C8orf87E5RJ46 101 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 K7EMI3 77 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 GNRH2O43555 120 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 PSCAO43653 123 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 NDUFC1O43677 76 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 IGHV3-30P01768 117 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 IGHV3-33P01772 117 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 COX6CP09669 75 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 IGHV3-30-3P0DP02 117 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 IGHV3-30-5P0DP03 117 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 PLNP26678 52 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 CKS2P33552 79 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 ZNF138P52744 262 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 SS18Q15532 418 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 LYPD5Q6UWN5 251 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 WFDC10BQ8IUB3 73 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 ZFAND2AQ8N6M9 145 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 C11orf72Q8NBR9 251 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 CYSTM1Q9H1C7 97 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 PRO1854Q9UHT4 67 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 PRO0255Q9UI72 69 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 DNAH11Q96DT5 4516 aa2.29□□□□□ -2.04
CCSER1-202ENST00000502478 FAT2Q9NYQ8 4349 aa2.28□□□□□ -2.04
CCSER1-202ENST00000502478 PCLOQ9Y6V0 5065 aa2.28□□□□□ -2.04
CCSER1-202ENST00000502478 PKHD1P08F94 4074 aa2.28□□□□□ -2.04
CCSER1-202ENST00000502478 A0A087WTM6 91 aa2.28□□□□□ -2.04
CCSER1-202ENST00000502478 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.28□□□□□ -2.04
CCSER1-202ENST00000502478 TRBV27A0A0K0K1C4 114 aa2.28□□□□□ -2.04
CCSER1-202ENST00000502478 A0A1B0GUT8 65 aa2.28□□□□□ -2.04
CCSER1-202ENST00000502478 H3BNG1 76 aa2.28□□□□□ -2.04
CCSER1-202ENST00000502478 LECT2O14960 151 aa2.28□□□□□ -2.04
CCSER1-202ENST00000502478 CCKP06307 115 aa2.28□□□□□ -2.04
CCSER1-202ENST00000502478 UBE2BP63146 152 aa2.28□□□□□ -2.04
CCSER1-202ENST00000502478 Q5VSD8 79 aa2.28□□□□□ -2.04
CCSER1-202ENST00000502478 SDIM1Q6ZPB5 146 aa2.28□□□□□ -2.04
CCSER1-202ENST00000502478 SLC25A29Q8N8R3 303 aa2.28□□□□□ -2.04
CCSER1-202ENST00000502478 LINC00467Q9BRT7 94 aa2.28□□□□□ -2.04
CCSER1-202ENST00000502478 ABCA13Q86UQ4 5058 aa2.27□□□□□ -2.05
CCSER1-202ENST00000502478 RYR1P21817 5038 aa2.27□□□□□ -2.05
CCSER1-202ENST00000502478 DYNC1H1Q14204 4646 aaKnown RBP2.27□□□□□ -2.05
CCSER1-202ENST00000502478 TMEM256-PLSCR3K7ERE1 68 aa2.27□□□□□ -2.05
CCSER1-202ENST00000502478 ZNF73O43830 326 aaPredicted RBP2.27□□□□□ -2.05
CCSER1-202ENST00000502478 ZNF22P17026 224 aaPredicted RBP2.27□□□□□ -2.05
CCSER1-202ENST00000502478 XCL1P47992 114 aa2.27□□□□□ -2.05
CCSER1-202ENST00000502478 CIRBPQ14011 172 aaKnown RBP2.27□□□□□ -2.05
CCSER1-202ENST00000502478 S100A7L2Q5SY68 101 aa2.27□□□□□ -2.05
CCSER1-202ENST00000502478 Q6JHZ5 121 aa2.27□□□□□ -2.05
CCSER1-202ENST00000502478 Q6ZRN7 208 aaPredicted RBP2.27□□□□□ -2.05
CCSER1-202ENST00000502478 PRNTQ86SH4 94 aa2.27□□□□□ -2.05
CCSER1-202ENST00000502478 Q8N8P6 123 aa2.27□□□□□ -2.05
CCSER1-202ENST00000502478 DAND5Q8N907 189 aa2.27□□□□□ -2.05
CCSER1-202ENST00000502478 TIMM17AQ99595 171 aa2.27□□□□□ -2.05
CCSER1-202ENST00000502478 TTTY13Q9BZ97 58 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms