RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 UQCRHP07919 91 aa-1.69□□□□□ -2.68
SMAD1-203ENST00000502342 NDUFC1O43677 76 aa-1.7□□□□□ -2.68
SMAD1-203ENST00000502342 C4AP0C0L4 1744 aa-1.7□□□□□ -2.68
SMAD1-203ENST00000502342 C4BP0C0L5 1744 aa-1.7□□□□□ -2.68
SMAD1-203ENST00000502342 ABCA3Q99758 1704 aa-1.7□□□□□ -2.68
SMAD1-203ENST00000502342 MLH3Q9UHC1 1453 aa-1.7□□□□□ -2.68
SMAD1-203ENST00000502342 NBEAL2Q6ZNJ1 2754 aa-1.71□□□□□ -2.68
SMAD1-203ENST00000502342 TMEM218A2RU14 115 aa-1.71□□□□□ -2.68
SMAD1-203ENST00000502342 HMGN1P05114 100 aa-1.71□□□□□ -2.68
SMAD1-203ENST00000502342 S100A1P23297 94 aa-1.71□□□□□ -2.68
SMAD1-203ENST00000502342 RPL13AP3Q6NVV1 102 aa-1.71□□□□□ -2.68
SMAD1-203ENST00000502342 PZPP20742 1482 aa-1.71□□□□□ -2.68
SMAD1-203ENST00000502342 ABCC2Q92887 1545 aa-1.71□□□□□ -2.68
SMAD1-203ENST00000502342 FAM135AQ9P2D6 1515 aa-1.71□□□□□ -2.68
SMAD1-203ENST00000502342 EIF4G3O43432 1585 aaKnown RBP-1.72□□□□□ -2.68
SMAD1-203ENST00000502342 DNAH1Q9P2D7 4330 aa-1.73□□□□□ -2.69
SMAD1-203ENST00000502342 QSER1Q2KHR3 1735 aa-1.73□□□□□ -2.69
SMAD1-203ENST00000502342 NDUFA3O95167 84 aa-1.73□□□□□ -2.69
SMAD1-203ENST00000502342 IGLC2P0DOY2 106 aa-1.73□□□□□ -2.69
SMAD1-203ENST00000502342 IGLC3P0DOY3 106 aa-1.73□□□□□ -2.69
SMAD1-203ENST00000502342 CEP290O15078 2479 aa-1.73□□□□□ -2.69
SMAD1-203ENST00000502342 RAPGEF2Q9Y4G8 1499 aa-1.74□□□□□ -2.69
SMAD1-203ENST00000502342 CORTO00230 105 aa-1.74□□□□□ -2.69
SMAD1-203ENST00000502342 DEFA5Q01523 94 aa-1.74□□□□□ -2.69
SMAD1-203ENST00000502342 KRTAP20-1Q3LI63 56 aa-1.74□□□□□ -2.69
SMAD1-203ENST00000502342 COX6B2Q6YFQ2 88 aa-1.74□□□□□ -2.69
SMAD1-203ENST00000502342 TRGV9Q99603 122 aa-1.74□□□□□ -2.69
SMAD1-203ENST00000502342 UBR3Q6ZT12 1888 aa-1.74□□□□□ -2.69
SMAD1-203ENST00000502342 RIF1Q5UIP0 2472 aaKnown RBP-1.74□□□□□ -2.69
SMAD1-203ENST00000502342 ALKQ9UM73 1620 aa-1.74□□□□□ -2.69
SMAD1-203ENST00000502342 PKD1L3Q7Z443 1732 aa-1.74□□□□□ -2.69
SMAD1-203ENST00000502342 GNGT2O14610 69 aa-1.75□□□□□ -2.69
SMAD1-203ENST00000502342 MPC2O95563 127 aa-1.75□□□□□ -2.69
SMAD1-203ENST00000502342 GTF2H5Q6ZYL4 71 aa-1.75□□□□□ -2.69
SMAD1-203ENST00000502342 MAGI2Q86UL8 1455 aa-1.75□□□□□ -2.69
SMAD1-203ENST00000502342 DLEU1O43261 78 aa-1.76□□□□□ -2.69
SMAD1-203ENST00000502342 RPL38P63173 70 aaKnown RBP-1.76□□□□□ -2.69
SMAD1-203ENST00000502342 CRYBG1Q9Y4K1 1723 aa-1.77□□□□□ -2.69
SMAD1-203ENST00000502342 RGPD8O14715 1765 aaPredicted RBP-1.77□□□□□ -2.69
SMAD1-203ENST00000502342 RGPD5Q99666 1765 aa-1.77□□□□□ -2.69
SMAD1-203ENST00000502342 A0A1B0GV90 55 aa-1.77□□□□□ -2.69
SMAD1-203ENST00000502342 D6R8Y8 96 aa-1.77□□□□□ -2.69
SMAD1-203ENST00000502342 H7BZZ5 65 aa-1.77□□□□□ -2.69
SMAD1-203ENST00000502342 LEPROTL1O95214 131 aa-1.77□□□□□ -2.69
SMAD1-203ENST00000502342 MUSTN1Q8IVN3 82 aa-1.77□□□□□ -2.69
SMAD1-203ENST00000502342 A0A0C4DFX4 3053 aa-1.78□□□□□ -2.69
SMAD1-203ENST00000502342 COX7BP24311 80 aa-1.78□□□□□ -2.69
SMAD1-203ENST00000502342 ETDBQ3ZM63 59 aa-1.78□□□□□ -2.69
SMAD1-203ENST00000502342 GNG8Q9UK08 70 aa-1.78□□□□□ -2.69
SMAD1-203ENST00000502342 LRRC9Q6ZRR7 1453 aa-1.78□□□□□ -2.69
SMAD1-203ENST00000502342 ACACBO00763 2458 aa-1.79□□□□□ -2.7
SMAD1-203ENST00000502342 HMGN3Q15651 99 aa-1.79□□□□□ -2.7
SMAD1-203ENST00000502342 ALKAL2Q6UX46 152 aa-1.79□□□□□ -2.7
SMAD1-203ENST00000502342 TMEM203Q969S6 136 aa-1.79□□□□□ -2.7
SMAD1-203ENST00000502342 S4R3F8 94 aa-1.79□□□□□ -2.7
SMAD1-203ENST00000502342 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.8□□□□□ -2.7
SMAD1-203ENST00000502342 PRDM15P57071 1507 aaPredicted RBP-1.8□□□□□ -2.7
SMAD1-203ENST00000502342 MAP3K1Q13233 1512 aa-1.8□□□□□ -2.7
SMAD1-203ENST00000502342 NRXN1Q9ULB1 1477 aa-1.8□□□□□ -2.7
SMAD1-203ENST00000502342 CMYA5Q8N3K9 4069 aa-1.8□□□□□ -2.7
SMAD1-203ENST00000502342 ZNF720Q7Z2F6 126 aa-1.8□□□□□ -2.7
SMAD1-203ENST00000502342 PMCHL2Q9BQD1 86 aa-1.8□□□□□ -2.7
SMAD1-203ENST00000502342 MRPS10P82664 201 aaKnown RBP-1.81□□□□□ -2.7
SMAD1-203ENST00000502342 MT1HP80294 61 aa-1.82□□□□□ -2.7
SMAD1-203ENST00000502342 DNAH7Q8WXX0 4024 aa-1.82□□□□□ -2.7
SMAD1-203ENST00000502342 SCN11AQ9UI33 1791 aa-1.82□□□□□ -2.7
SMAD1-203ENST00000502342 ATOX1O00244 68 aa-1.83□□□□□ -2.7
SMAD1-203ENST00000502342 DEFB110Q30KQ9 67 aa-1.83□□□□□ -2.7
SMAD1-203ENST00000502342 SERP2Q8N6R1 65 aa-1.83□□□□□ -2.7
SMAD1-203ENST00000502342 LRRC7Q96NW7 1537 aa-1.83□□□□□ -2.7
SMAD1-203ENST00000502342 SACSQ9NZJ4 4579 aa-1.84□□□□□ -2.7
SMAD1-203ENST00000502342 F8WEM9 126 aa-1.84□□□□□ -2.7
SMAD1-203ENST00000502342 K7EP34 96 aa-1.84□□□□□ -2.7
SMAD1-203ENST00000502342 UBE2D4Q9Y2X8 147 aa-1.84□□□□□ -2.7
SMAD1-203ENST00000502342 ANKRD36BQ8N2N9 1353 aa-1.85□□□□□ -2.7
SMAD1-203ENST00000502342 EFCAB10A6NFE3 127 aa-1.85□□□□□ -2.71
SMAD1-203ENST00000502342 PRO3102Q9H379 93 aa-1.85□□□□□ -2.71
SMAD1-203ENST00000502342 TRIOO75962 3097 aa-1.85□□□□□ -2.71
SMAD1-203ENST00000502342 CLTCQ00610 1675 aaKnown RBP-1.86□□□□□ -2.71
SMAD1-203ENST00000502342 UQCRHLA0A096LP55 91 aa-1.86□□□□□ -2.71
SMAD1-203ENST00000502342 GAFA1Q96PS6 74 aa-1.86□□□□□ -2.71
SMAD1-203ENST00000502342 DNAH8Q96JB1 4490 aa-1.86□□□□□ -2.71
SMAD1-203ENST00000502342 TIAM2Q8IVF5 1701 aa-1.86□□□□□ -2.71
SMAD1-203ENST00000502342 DYNC1H1Q14204 4646 aaKnown RBP-1.86□□□□□ -2.71
SMAD1-203ENST00000502342 PLXNC1O60486 1568 aa-1.87□□□□□ -2.71
SMAD1-203ENST00000502342 PRLHP81277 87 aa-1.87□□□□□ -2.71
SMAD1-203ENST00000502342 ITPR1Q14643 2758 aa-1.87□□□□□ -2.71
SMAD1-203ENST00000502342 RGPD3A6NKT7 1758 aaPredicted RBP-1.87□□□□□ -2.71
SMAD1-203ENST00000502342 RGPD4Q7Z3J3 1758 aa-1.87□□□□□ -2.71
SMAD1-203ENST00000502342 C3orf79P0CE67 100 aa-1.88□□□□□ -2.71
SMAD1-203ENST00000502342 LINC00158P58513 81 aa-1.88□□□□□ -2.71
SMAD1-203ENST00000502342 COL5A1-AS1Q5SY13 56 aa-1.88□□□□□ -2.71
SMAD1-203ENST00000502342 USP32Q8NFA0 1604 aa-1.88□□□□□ -2.71
SMAD1-203ENST00000502342 MT-ATP8P03928 68 aa-1.89□□□□□ -2.71
SMAD1-203ENST00000502342 MT1HL1P0DM35 61 aa-1.89□□□□□ -2.71
SMAD1-203ENST00000502342 DEFB1P60022 68 aa-1.89□□□□□ -2.71
SMAD1-203ENST00000502342 C2orf88Q9BSF0 95 aa-1.89□□□□□ -2.71
SMAD1-203ENST00000502342 MYH4Q9Y623 1939 aa-1.89□□□□□ -2.71
SMAD1-203ENST00000502342 ZFYVE16Q7Z3T8 1539 aa-1.9□□□□□ -2.71
SMAD1-203ENST00000502342 RGPD1P0DJD0 1748 aa-1.9□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms