RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 DDTP30046 118 aa9.23□□□□□ -0.93
NUP50-219ENST00000497960 RPL28P46779 137 aaKnown RBP9.23□□□□□ -0.93
NUP50-219ENST00000497960 PPDPFQ9H3Y8 114 aa9.23□□□□□ -0.93
NUP50-219ENST00000497960 PRYO14603 147 aa9.22□□□□□ -0.93
NUP50-219ENST00000497960 KRTAP1-4P0C5Y4 121 aa9.22□□□□□ -0.93
NUP50-219ENST00000497960 C2orf91Q6ZV80 131 aa9.22□□□□□ -0.93
NUP50-219ENST00000497960 HIGD1BQ9P298 99 aa9.22□□□□□ -0.93
NUP50-219ENST00000497960 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.94
NUP50-219ENST00000497960 LINC00518Q8N0U6 118 aa9.2□□□□□ -0.94
NUP50-219ENST00000497960 TMEM126AQ9H061 195 aa9.2□□□□□ -0.94
NUP50-219ENST00000497960 UQCR10Q9UDW1 63 aa9.2□□□□□ -0.94
NUP50-219ENST00000497960 RPL13AP40429 203 aaKnown RBP9.19□□□□□ -0.94
NUP50-219ENST00000497960 UBE2AP49459 152 aa9.19□□□□□ -0.94
NUP50-219ENST00000497960 IGLV6-57P01721 117 aa9.18□□□□□ -0.94
NUP50-219ENST00000497960 FAM19A1Q7Z5A9 133 aa9.18□□□□□ -0.94
NUP50-219ENST00000497960 TRAV23DV6A0A075B6W5 121 aa9.17□□□□□ -0.94
NUP50-219ENST00000497960 LINC00337Q8N6G1 96 aa9.17□□□□□ -0.94
NUP50-219ENST00000497960 KCNQ1DNQ9H478 68 aa9.17□□□□□ -0.94
NUP50-219ENST00000497960 CBY1Q9Y3M2 126 aa9.17□□□□□ -0.94
NUP50-219ENST00000497960 A4D1N5 150 aa9.16□□□□□ -0.94
NUP50-219ENST00000497960 PRO1933Q9H354 126 aa9.16□□□□□ -0.94
NUP50-219ENST00000497960 ETDCA0A1B0GVM5 59 aa9.15□□□□□ -0.94
NUP50-219ENST00000497960 A6NDN8 102 aa9.15□□□□□ -0.94
NUP50-219ENST00000497960 PRLHP81277 87 aa9.15□□□□□ -0.94
NUP50-219ENST00000497960 TAL2Q16559 108 aa9.15□□□□□ -0.94
NUP50-219ENST00000497960 C12orf57Q99622 126 aa9.15□□□□□ -0.94
NUP50-219ENST00000497960 TRAV13-2A0A0B4J235 113 aa9.14□□□□□ -0.95
NUP50-219ENST00000497960 SPRR1AP35321 89 aa9.13□□□□□ -0.95
NUP50-219ENST00000497960 HSD52Q0P140 79 aa9.13□□□□□ -0.95
NUP50-219ENST00000497960 TMEM238LA0A1B0GVL6 79 aa9.12□□□□□ -0.95
NUP50-219ENST00000497960 A6NJY4 79 aa9.12□□□□□ -0.95
NUP50-219ENST00000497960 ZNF73O43830 326 aaPredicted RBP9.12□□□□□ -0.95
NUP50-219ENST00000497960 KRTAP13-1Q8IUC0 172 aa9.12□□□□□ -0.95
NUP50-219ENST00000497960 CEND1Q8N111 149 aa9.12□□□□□ -0.95
NUP50-219ENST00000497960 CRYGAP11844 174 aa9.11□□□□□ -0.95
NUP50-219ENST00000497960 UBR4Q5T4S7 5183 aa9.11□□□□□ -0.95
NUP50-219ENST00000497960 TSTD3H0UI37 97 aa9.1□□□□□ -0.95
NUP50-219ENST00000497960 KRTAP4-16G5E9R7 235 aaPredicted RBP9.09□□□□□ -0.95
NUP50-219ENST00000497960 HINT1P49773 126 aaPredicted RBP9.09□□□□□ -0.95
NUP50-219ENST00000497960 FXYD2P54710 66 aa9.09□□□□□ -0.95
NUP50-219ENST00000497960 RAB37Q96AX2 223 aa9.09□□□□□ -0.95
NUP50-219ENST00000497960 HIGD2AQ9BW72 106 aa9.09□□□□□ -0.95
NUP50-219ENST00000497960 LRP2P98164 4655 aa9.08□□□□□ -0.96
NUP50-219ENST00000497960 A0A087X002 238 aa9.07□□□□□ -0.96
NUP50-219ENST00000497960 A0A0B4J2C4 111 aa9.07□□□□□ -0.96
NUP50-219ENST00000497960 B5MCH6 92 aa9.07□□□□□ -0.96
NUP50-219ENST00000497960 C6orf99Q4VX62 202 aa9.07□□□□□ -0.96
NUP50-219ENST00000497960 Q6ZRX8 168 aa9.07□□□□□ -0.96
NUP50-219ENST00000497960 TYMSOSQ8TAI1 123 aa9.07□□□□□ -0.96
NUP50-219ENST00000497960 CFC1BP0CG36 223 aa9.06□□□□□ -0.96
NUP50-219ENST00000497960 CFC1P0CG37 223 aa9.06□□□□□ -0.96
NUP50-219ENST00000497960 ANAPC11Q9NYG5 84 aa9.06□□□□□ -0.96
NUP50-219ENST00000497960 FAM229BQ4G0N7 80 aa9.05□□□□□ -0.96
NUP50-219ENST00000497960 SMIM11BQ8TCY0 68 aa9.05□□□□□ -0.96
NUP50-219ENST00000497960 H7C2G1 150 aa9.04□□□□□ -0.96
NUP50-219ENST00000497960 COX7BP24311 80 aa9.04□□□□□ -0.96
NUP50-219ENST00000497960 NHP2Q9NX24 153 aaKnown RBP9.04□□□□□ -0.96
NUP50-219ENST00000497960 ELOF1P60002 83 aaKnown RBP9.03□□□□□ -0.96
NUP50-219ENST00000497960 SMCR5Q8TEV8 140 aa9.03□□□□□ -0.96
NUP50-219ENST00000497960 TSPAN13O95857 204 aa9.02□□□□□ -0.97
NUP50-219ENST00000497960 Q1RN00 199 aa9.02□□□□□ -0.97
NUP50-219ENST00000497960 Q9BRP9 147 aa9.02□□□□□ -0.97
NUP50-219ENST00000497960 A0A1B0GWB2 263 aa9.01□□□□□ -0.97
NUP50-219ENST00000497960 CTAG1AP78358 180 aa9.01□□□□□ -0.97
NUP50-219ENST00000497960 PRR4Q16378 134 aa9.01□□□□□ -0.97
NUP50-219ENST00000497960 ZNF706Q9Y5V0 76 aaPredicted RBP9.01□□□□□ -0.97
NUP50-219ENST00000497960 TRBV7-6A0A0J9YX20 115 aa9□□□□□ -0.97
NUP50-219ENST00000497960 M0R143 59 aa9□□□□□ -0.97
NUP50-219ENST00000497960 KRTAP13-2Q52LG2 175 aa9□□□□□ -0.97
NUP50-219ENST00000497960 K7ERJ3 54 aa8.99□□□□□ -0.97
NUP50-219ENST00000497960 BVES-AS1Q5T3Y7 98 aa8.99□□□□□ -0.97
NUP50-219ENST00000497960 DHRS4-AS1Q9P1J3 65 aa8.99□□□□□ -0.97
NUP50-219ENST00000497960 PRO1854Q9UHT4 67 aa8.99□□□□□ -0.97
NUP50-219ENST00000497960 VAMP3Q15836 100 aa8.98□□□□□ -0.97
NUP50-219ENST00000497960 ERC2-IT1O76042 136 aa8.97□□□□□ -0.97
NUP50-219ENST00000497960 SPRR4Q96PI1 79 aa8.97□□□□□ -0.97
NUP50-219ENST00000497960 LINC00304Q8N9R0 145 aa8.96□□□□□ -0.98
NUP50-219ENST00000497960 SLC25A20O43772 301 aa8.94□□□□□ -0.98
NUP50-219ENST00000497960 GAGE2AQ6NT46 116 aa8.93□□□□□ -0.98
NUP50-219ENST00000497960 BATFQ16520 125 aa8.92□□□□□ -0.98
NUP50-219ENST00000497960 ST20-AS1Q8NBB2 130 aa8.92□□□□□ -0.98
NUP50-219ENST00000497960 PSMB2P49721 201 aa8.91□□□□□ -0.98
NUP50-219ENST00000497960 C3orf22Q8N5N4 141 aa8.91□□□□□ -0.98
NUP50-219ENST00000497960 TRIAP1O43715 76 aa8.9□□□□□ -0.98
NUP50-219ENST00000497960 LINC00575Q6W349 94 aa8.9□□□□□ -0.98
NUP50-219ENST00000497960 LINC00483Q53H64 154 aa8.89□□□□□ -0.99
NUP50-219ENST00000497960 hADV29S1A0JD25 119 aa8.88□□□□□ -0.99
NUP50-219ENST00000497960 H0YGX0 51 aa8.88□□□□□ -0.99
NUP50-219ENST00000497960 LPAP08519 4548 aa8.88□□□□□ -0.99
NUP50-219ENST00000497960 C4orf48Q5BLP8 95 aa8.87□□□□□ -0.99
NUP50-219ENST00000497960 SPAG11AQ6PDA7 123 aa8.87□□□□□ -0.99
NUP50-219ENST00000497960 DEFB105AQ8NG35 78 aa8.87□□□□□ -0.99
NUP50-219ENST00000497960 SNCGO76070 127 aa8.86□□□□□ -0.99
NUP50-219ENST00000497960 COX6CP09669 75 aa8.86□□□□□ -0.99
NUP50-219ENST00000497960 Q6ZQY7 126 aa8.85□□□□□ -0.99
NUP50-219ENST00000497960 RETNLBQ9BQ08 111 aa8.85□□□□□ -0.99
NUP50-219ENST00000497960 IGLV9-49A0A0B4J1Y8 123 aa8.84□□□□□ -0.99
NUP50-219ENST00000497960 CLEC2BQ92478 149 aa8.84□□□□□ -0.99
NUP50-219ENST00000497960 FAM218AQ96MZ4 157 aa8.84□□□□□ -0.99
NUP50-219ENST00000497960 RNF213Q63HN8 5207 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms