RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 K7EIL1 84 aa7.76□□□□□ -1.17
SNRNP200-208ENST00000497539 NANOS2P60321 138 aaKnown RBP7.76□□□□□ -1.17
SNRNP200-208ENST00000497539 ZNF73O43830 326 aaPredicted RBP7.75□□□□□ -1.17
SNRNP200-208ENST00000497539 ENHOQ6UWT2 76 aa7.75□□□□□ -1.17
SNRNP200-208ENST00000497539 IGLV10-54A0A075B6I4 117 aa7.75□□□□□ -1.17
SNRNP200-208ENST00000497539 ANK2Q01484 3957 aa7.75□□□□□ -1.17
SNRNP200-208ENST00000497539 DEFB131BA0A096LNP1 70 aa7.74□□□□□ -1.17
SNRNP200-208ENST00000497539 TMEM256-PLSCR3K7ERE1 68 aa7.74□□□□□ -1.17
SNRNP200-208ENST00000497539 Q8N814 137 aa7.74□□□□□ -1.17
SNRNP200-208ENST00000497539 GVQW2A0A096LPI5 108 aaPredicted RBP7.73□□□□□ -1.17
SNRNP200-208ENST00000497539 TRAV10A0A0B4J240 114 aa7.73□□□□□ -1.17
SNRNP200-208ENST00000497539 UBE2BP63146 152 aa7.73□□□□□ -1.17
SNRNP200-208ENST00000497539 LINC01556Q5JQF7 62 aa7.73□□□□□ -1.17
SNRNP200-208ENST00000497539 KRTAP26-1Q6PEX3 210 aa7.73□□□□□ -1.17
SNRNP200-208ENST00000497539 Q8NDZ9 215 aa7.73□□□□□ -1.17
SNRNP200-208ENST00000497539 TRBV7-4A0A0J9YYF1 115 aa7.72□□□□□ -1.17
SNRNP200-208ENST00000497539 KLK12Q9UKR0 248 aa7.72□□□□□ -1.17
SNRNP200-208ENST00000497539 ERC2-IT1O76042 136 aa7.72□□□□□ -1.17
SNRNP200-208ENST00000497539 Q6ZRP5 223 aa7.72□□□□□ -1.17
SNRNP200-208ENST00000497539 WFDC10BQ8IUB3 73 aa7.72□□□□□ -1.17
SNRNP200-208ENST00000497539 C6orf99Q4VX62 202 aa7.71□□□□□ -1.17
SNRNP200-208ENST00000497539 M0R2N4 97 aa7.7□□□□□ -1.18
SNRNP200-208ENST00000497539 DNAH10OSP0CZ25 163 aa7.7□□□□□ -1.18
SNRNP200-208ENST00000497539 SERTAD4-AS1Q5TG53 156 aa7.7□□□□□ -1.18
SNRNP200-208ENST00000497539 SPAG11BQ08648 103 aa7.69□□□□□ -1.18
SNRNP200-208ENST00000497539 LCA10Q71F78 164 aa7.69□□□□□ -1.18
SNRNP200-208ENST00000497539 hDV103S1A0JD37 113 aa7.68□□□□□ -1.18
SNRNP200-208ENST00000497539 JMJD7-PLA2G4BH0Y9G9 81 aa7.68□□□□□ -1.18
SNRNP200-208ENST00000497539 LINC00167Q96N53 147 aa7.68□□□□□ -1.18
SNRNP200-208ENST00000497539 STAB1Q9NY15 2570 aa7.67□□□□□ -1.18
SNRNP200-208ENST00000497539 SYCNQ0VAF6 134 aa7.67□□□□□ -1.18
SNRNP200-208ENST00000497539 A8MUN3 132 aa7.66□□□□□ -1.18
SNRNP200-208ENST00000497539 C10orf25Q5T742 122 aa7.66□□□□□ -1.18
SNRNP200-208ENST00000497539 A6NN06 94 aa7.66□□□□□ -1.18
SNRNP200-208ENST00000497539 UBL5Q9BZL1 73 aa7.66□□□□□ -1.18
SNRNP200-208ENST00000497539 ATP11AUNQ6ZP68 121 aa7.65□□□□□ -1.18
SNRNP200-208ENST00000497539 DIRC1Q969H9 104 aa7.65□□□□□ -1.18
SNRNP200-208ENST00000497539 FUSP35637 526 aaKnown RBP eCLIP7.65□□□□□ -1.18
SNRNP200-208ENST00000497539 HAMPP81172 84 aa7.65□□□□□ -1.18
SNRNP200-208ENST00000497539 UNQ6190/PRO20217Q6UXQ8 127 aa7.65□□□□□ -1.19
SNRNP200-208ENST00000497539 TMEM254Q8TBM7 123 aa7.65□□□□□ -1.19
SNRNP200-208ENST00000497539 TRAV22A0A0B4J277 110 aa7.64□□□□□ -1.19
SNRNP200-208ENST00000497539 COL6A5A8TX70 2615 aa7.64□□□□□ -1.19
SNRNP200-208ENST00000497539 PRB2P02812 416 aaPredicted RBP7.64□□□□□ -1.19
SNRNP200-208ENST00000497539 LINC00575Q6W349 94 aa7.64□□□□□ -1.19
SNRNP200-208ENST00000497539 MDFIQ99750 246 aa7.64□□□□□ -1.19
SNRNP200-208ENST00000497539 C7orf65Q6ZTY9 151 aa7.63□□□□□ -1.19
SNRNP200-208ENST00000497539 C15orf56Q8N910 161 aa7.63□□□□□ -1.19
SNRNP200-208ENST00000497539 PKD1L1Q8TDX9 2849 aa7.63□□□□□ -1.19
SNRNP200-208ENST00000497539 Q6ZQT0 140 aa7.62□□□□□ -1.19
SNRNP200-208ENST00000497539 C6orf48Q9UBA6 75 aa7.62□□□□□ -1.19
SNRNP200-208ENST00000497539 HUWE1Q7Z6Z7 4374 aaKnown RBP7.62□□□□□ -1.19
SNRNP200-208ENST00000497539 Q6ZQY7 126 aa7.61□□□□□ -1.19
SNRNP200-208ENST00000497539 SCXQ7RTU7 201 aa7.61□□□□□ -1.19
SNRNP200-208ENST00000497539 B9D2Q9BPU9 175 aa7.61□□□□□ -1.19
SNRNP200-208ENST00000497539 C16orf90A8MZG2 172 aa7.6□□□□□ -1.19
SNRNP200-208ENST00000497539 PSPHP1O15172 72 aa7.6□□□□□ -1.19
SNRNP200-208ENST00000497539 TENM3Q9P273 2699 aa7.6□□□□□ -1.19
SNRNP200-208ENST00000497539 A8MU10 97 aa7.6□□□□□ -1.19
SNRNP200-208ENST00000497539 PRYO14603 147 aa7.6□□□□□ -1.19
SNRNP200-208ENST00000497539 LINC01547P58512 204 aaPredicted RBP7.6□□□□□ -1.19
SNRNP200-208ENST00000497539 XAGE1AQ9HD64 81 aa7.6□□□□□ -1.19
SNRNP200-208ENST00000497539 UBE2AP49459 152 aa7.59□□□□□ -1.19
SNRNP200-208ENST00000497539 IGLV6-57P01721 117 aa7.57□□□□□ -1.2
SNRNP200-208ENST00000497539 CAMK2N2Q96S95 79 aa7.57□□□□□ -1.2
SNRNP200-208ENST00000497539 NREPQ16612 68 aa7.56□□□□□ -1.2
SNRNP200-208ENST00000497539 KRTAP21-3Q3LHN1 58 aa7.56□□□□□ -1.2
SNRNP200-208ENST00000497539 Q5VV11 94 aa7.56□□□□□ -1.2
SNRNP200-208ENST00000497539 IGKV2D-24A0A075B6R9 120 aa7.55□□□□□ -1.2
SNRNP200-208ENST00000497539 TLX1NBP0CAT3 122 aa7.55□□□□□ -1.2
SNRNP200-208ENST00000497539 CXCL6P80162 114 aa7.55□□□□□ -1.2
SNRNP200-208ENST00000497539 LOC110117498A0A087WWA1 95 aa7.55□□□□□ -1.2
SNRNP200-208ENST00000497539 HIGD2BQ4VC39 106 aa7.55□□□□□ -1.2
SNRNP200-208ENST00000497539 NKAPP1Q8N9T2 125 aa7.55□□□□□ -1.2
SNRNP200-208ENST00000497539 C1orf64Q8NEQ6 169 aa7.53□□□□□ -1.2
SNRNP200-208ENST00000497539 APLNQ9ULZ1 77 aa7.53□□□□□ -1.2
SNRNP200-208ENST00000497539 DYNC2H1Q8NCM8 4307 aaKnown RBP7.53□□□□□ -1.2
SNRNP200-208ENST00000497539 DNAH1Q9P2D7 4330 aa7.53□□□□□ -1.2
SNRNP200-208ENST00000497539 Q8N9L7 120 aa7.52□□□□□ -1.21
SNRNP200-208ENST00000497539 HCG22E2RYF7 251 aa7.51□□□□□ -1.21
SNRNP200-208ENST00000497539 PLA2G2DQ9UNK4 145 aa7.51□□□□□ -1.21
SNRNP200-208ENST00000497539 DNAH9Q9NYC9 4486 aa7.51□□□□□ -1.21
SNRNP200-208ENST00000497539 PSCAO43653 123 aa7.5□□□□□ -1.21
SNRNP200-208ENST00000497539 DNHD1Q96M86 4753 aa7.5□□□□□ -1.21
SNRNP200-208ENST00000497539 LRCOL1A6NCL2 159 aa7.49□□□□□ -1.21
SNRNP200-208ENST00000497539 SPTSSBQ8NFR3 76 aa7.49□□□□□ -1.21
SNRNP200-208ENST00000497539 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.49□□□□□ -1.21
SNRNP200-208ENST00000497539 CYP4F30PQ9H0H9 118 aa7.49□□□□□ -1.21
SNRNP200-208ENST00000497539 NBEAL1Q6ZS30 2694 aa7.49□□□□□ -1.21
SNRNP200-208ENST00000497539 IGLV5-37A0A075B6J1 123 aa7.48□□□□□ -1.21
SNRNP200-208ENST00000497539 COX7BP24311 80 aa7.48□□□□□ -1.21
SNRNP200-208ENST00000497539 LINC00313P59037 77 aa7.48□□□□□ -1.21
SNRNP200-208ENST00000497539 NOTCH1P46531 2555 aa7.48□□□□□ -1.21
SNRNP200-208ENST00000497539 LINC01554Q52M75 96 aa7.47□□□□□ -1.21
SNRNP200-208ENST00000497539 OCR1Q9BZK8 76 aa7.47□□□□□ -1.21
SNRNP200-208ENST00000497539 NUPR2A6NF83 97 aa7.47□□□□□ -1.21
SNRNP200-208ENST00000497539 H3BQ85 93 aa7.47□□□□□ -1.21
SNRNP200-208ENST00000497539 BPY2O14599 106 aa7.47□□□□□ -1.21
SNRNP200-208ENST00000497539 CHKB-CPT1BH3BT56 60 aa7.45□□□□□ -1.22
SNRNP200-208ENST00000497539 CASC10Q5T4H9 136 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms