RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 LINC00528Q8N1L1 170 aa11.3□□□□□ -0.6
RGP1-202ENST00000496906 SNHG12Q9BXW3 62 aa11.3□□□□□ -0.6
RGP1-202ENST00000496906 VPS13BQ7Z7G8 4022 aa11.3□□□□□ -0.6
RGP1-202ENST00000496906 SPRR1AP35321 89 aa11.29□□□□□ -0.6
RGP1-202ENST00000496906 H7C2G1 150 aa11.28□□□□□ -0.6
RGP1-202ENST00000496906 SMIM11BQ8TCY0 68 aa11.28□□□□□ -0.6
RGP1-202ENST00000496906 ZNF73O43830 326 aaPredicted RBP11.28□□□□□ -0.6
RGP1-202ENST00000496906 KRTAP4-16G5E9R7 235 aaPredicted RBP11.26□□□□□ -0.61
RGP1-202ENST00000496906 RPL28P46779 137 aaKnown RBP11.25□□□□□ -0.61
RGP1-202ENST00000496906 C6orf99Q4VX62 202 aa11.25□□□□□ -0.61
RGP1-202ENST00000496906 C1orf137Q5JT78 98 aa11.25□□□□□ -0.61
RGP1-202ENST00000496906 DIRC1Q969H9 104 aa11.25□□□□□ -0.61
RGP1-202ENST00000496906 BCE1O60756 84 aa11.24□□□□□ -0.61
RGP1-202ENST00000496906 TSPAN13O95857 204 aa11.24□□□□□ -0.61
RGP1-202ENST00000496906 Q1RN00 199 aa11.24□□□□□ -0.61
RGP1-202ENST00000496906 RPL37AP61513 92 aaKnown RBP11.24□□□□□ -0.61
RGP1-202ENST00000496906 FAM19A1Q7Z5A9 133 aa11.22□□□□□ -0.61
RGP1-202ENST00000496906 ETDCA0A1B0GVM5 59 aa11.21□□□□□ -0.61
RGP1-202ENST00000496906 B5MCH6 92 aa11.2□□□□□ -0.62
RGP1-202ENST00000496906 TRBV7-6A0A0J9YX20 115 aa11.2□□□□□ -0.62
RGP1-202ENST00000496906 IGLV7-43P04211 117 aa11.2□□□□□ -0.62
RGP1-202ENST00000496906 KRTAP10-4P60372 401 aaPredicted RBP11.2□□□□□ -0.62
RGP1-202ENST00000496906 KRTAP17-1Q9BYP8 105 aa11.2□□□□□ -0.62
RGP1-202ENST00000496906 FAM229AH3BQW9 127 aa11.19□□□□□ -0.62
RGP1-202ENST00000496906 ELOF1P60002 83 aaKnown RBP11.19□□□□□ -0.62
RGP1-202ENST00000496906 PRLHP81277 87 aa11.19□□□□□ -0.62
RGP1-202ENST00000496906 Q6ZRX8 168 aa11.19□□□□□ -0.62
RGP1-202ENST00000496906 KRTAP13-1Q8IUC0 172 aa11.19□□□□□ -0.62
RGP1-202ENST00000496906 TRIAP1O43715 76 aa11.18□□□□□ -0.62
RGP1-202ENST00000496906 COX7BP24311 80 aa11.18□□□□□ -0.62
RGP1-202ENST00000496906 UBE2AP49459 152 aa11.18□□□□□ -0.62
RGP1-202ENST00000496906 H0Y9J4 135 aa11.17□□□□□ -0.62
RGP1-202ENST00000496906 TAX1BP3O14907 124 aa11.17□□□□□ -0.62
RGP1-202ENST00000496906 COL5A1-AS1Q5SY13 56 aa11.17□□□□□ -0.62
RGP1-202ENST00000496906 Q5VSD8 79 aa11.17□□□□□ -0.62
RGP1-202ENST00000496906 Q8N1X5 172 aa11.17□□□□□ -0.62
RGP1-202ENST00000496906 HERC2O95714 4834 aa11.17□□□□□ -0.62
RGP1-202ENST00000496906 ZNF861PO60384 105 aa11.16□□□□□ -0.62
RGP1-202ENST00000496906 PLA2G1BP04054 148 aaKnown RBP11.16□□□□□ -0.62
RGP1-202ENST00000496906 PSMB2P49721 201 aa11.16□□□□□ -0.62
RGP1-202ENST00000496906 VAMP3Q15836 100 aa11.16□□□□□ -0.62
RGP1-202ENST00000496906 NAA38Q9BRA0 125 aaKnown RBP11.15□□□□□ -0.62
RGP1-202ENST00000496906 Q9BRP9 147 aa11.14□□□□□ -0.63
RGP1-202ENST00000496906 SMCR5Q8TEV8 140 aa11.12□□□□□ -0.63
RGP1-202ENST00000496906 C9orf118A6NHY6 69 aa11.11□□□□□ -0.63
RGP1-202ENST00000496906 H0YGX0 51 aa11.11□□□□□ -0.63
RGP1-202ENST00000496906 COX6CP09669 75 aa11.11□□□□□ -0.63
RGP1-202ENST00000496906 HIGD2AQ9BW72 106 aa11.11□□□□□ -0.63
RGP1-202ENST00000496906 H3BUT2 72 aa11.11□□□□□ -0.63
RGP1-202ENST00000496906 LINC00575Q6W349 94 aa11.1□□□□□ -0.63
RGP1-202ENST00000496906 DHRS4-AS1Q9P1J3 65 aa11.1□□□□□ -0.63
RGP1-202ENST00000496906 INAFM2P0DMQ5 153 aa11.09□□□□□ -0.63
RGP1-202ENST00000496906 SCGB1C2P0DMR2 95 aa11.08□□□□□ -0.64
RGP1-202ENST00000496906 FAM218AQ96MZ4 157 aa11.08□□□□□ -0.64
RGP1-202ENST00000496906 ERC2-IT1O76042 136 aa11.07□□□□□ -0.64
RGP1-202ENST00000496906 CLEC2BQ92478 149 aa11.07□□□□□ -0.64
RGP1-202ENST00000496906 SLC25A20O43772 301 aa11.06□□□□□ -0.64
RGP1-202ENST00000496906 SPINK6Q6UWN8 80 aa11.06□□□□□ -0.64
RGP1-202ENST00000496906 A0A1W2PPM0 123 aa11.05□□□□□ -0.64
RGP1-202ENST00000496906 KRTAP4-5Q9BYR2 181 aa11.05□□□□□ -0.64
RGP1-202ENST00000496906 SRRM2Q9UQ35 2752 aaKnown RBP11.04□□□□□ -0.64
RGP1-202ENST00000496906 hADV29S1A0JD25 119 aa11.04□□□□□ -0.64
RGP1-202ENST00000496906 PKHD1L1Q86WI1 4243 aa11.04□□□□□ -0.64
RGP1-202ENST00000496906 A0A1B0GX51 115 aa11.03□□□□□ -0.64
RGP1-202ENST00000496906 LYRM7Q5U5X0 104 aa11.03□□□□□ -0.64
RGP1-202ENST00000496906 LST1O00453 97 aa11.01□□□□□ -0.65
RGP1-202ENST00000496906 TCL1BO95988 128 aa11.01□□□□□ -0.65
RGP1-202ENST00000496906 FABP2P12104 132 aa11.01□□□□□ -0.65
RGP1-202ENST00000496906 ST20-AS1Q8NBB2 130 aa11□□□□□ -0.65
RGP1-202ENST00000496906 SNCGO76070 127 aa10.99□□□□□ -0.65
RGP1-202ENST00000496906 Q6ZQY7 126 aa10.99□□□□□ -0.65
RGP1-202ENST00000496906 SPRR4Q96PI1 79 aa10.99□□□□□ -0.65
RGP1-202ENST00000496906 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.98□□□□□ -0.65
RGP1-202ENST00000496906 ZNF706Q9Y5V0 76 aaPredicted RBP10.98□□□□□ -0.65
RGP1-202ENST00000496906 TRBV20-1A0A075B6N2 111 aa10.97□□□□□ -0.65
RGP1-202ENST00000496906 TRACP01848 142 aa10.97□□□□□ -0.65
RGP1-202ENST00000496906 ATXN8Q156A1 80 aa10.97□□□□□ -0.65
RGP1-202ENST00000496906 DNAL4O96015 105 aa10.95□□□□□ -0.66
RGP1-202ENST00000496906 LINC01547P58512 204 aaPredicted RBP10.95□□□□□ -0.66
RGP1-202ENST00000496906 IGLV5-48A0A075B6I7 105 aa10.94□□□□□ -0.66
RGP1-202ENST00000496906 KRTAP1-4P0C5Y4 121 aa10.94□□□□□ -0.66
RGP1-202ENST00000496906 SPCS1Q9Y6A9 102 aa10.94□□□□□ -0.66
RGP1-202ENST00000496906 GAGE2AQ6NT46 116 aa10.94□□□□□ -0.66
RGP1-202ENST00000496906 LINC00483Q53H64 154 aa10.93□□□□□ -0.66
RGP1-202ENST00000496906 DEFB105AQ8NG35 78 aa10.92□□□□□ -0.66
RGP1-202ENST00000496906 ABCA13Q86UQ4 5058 aa10.92□□□□□ -0.66
RGP1-202ENST00000496906 SPRR1BP22528 89 aa10.91□□□□□ -0.66
RGP1-202ENST00000496906 OCIAD2Q56VL3 154 aa10.91□□□□□ -0.66
RGP1-202ENST00000496906 TEX49A0A1B0GTD5 131 aa10.9□□□□□ -0.66
RGP1-202ENST00000496906 Q8N377 158 aa10.9□□□□□ -0.66
RGP1-202ENST00000496906 ANAPC11Q9NYG5 84 aa10.9□□□□□ -0.66
RGP1-202ENST00000496906 ORMDL1Q9P0S3 153 aa10.9□□□□□ -0.67
RGP1-202ENST00000496906 H3BMG7 143 aa10.89□□□□□ -0.67
RGP1-202ENST00000496906 K7EP34 96 aa10.89□□□□□ -0.67
RGP1-202ENST00000496906 PPDPFLQ8WWR9 84 aa10.88□□□□□ -0.67
RGP1-202ENST00000496906 GHRHP01286 108 aa10.86□□□□□ -0.67
RGP1-202ENST00000496906 FAM229BQ4G0N7 80 aa10.86□□□□□ -0.67
RGP1-202ENST00000496906 FLG2Q5D862 2391 aaPredicted RBP10.86□□□□□ -0.67
RGP1-202ENST00000496906 FAT3Q8TDW7 4589 aa10.86□□□□□ -0.67
RGP1-202ENST00000496906 LRP1Q07954 4544 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms