RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 DIRC1Q969H9 104 aa2.17□□□□□ -2.06
TRIM4-205ENST00000496896 IGF2RP11717 2491 aa2.17□□□□□ -2.06
TRIM4-205ENST00000496896 LAMA5O15230 3695 aa2.17□□□□□ -2.06
TRIM4-205ENST00000496896 SORL1Q92673 2214 aa2.17□□□□□ -2.06
TRIM4-205ENST00000496896 LRBAP50851 2863 aa2.16□□□□□ -2.06
TRIM4-205ENST00000496896 DCHS2Q6V1P9 2916 aa2.16□□□□□ -2.06
TRIM4-205ENST00000496896 DCHS1Q96JQ0 3298 aa2.16□□□□□ -2.06
TRIM4-205ENST00000496896 SMIM26A0A096LP01 95 aa2.16□□□□□ -2.06
TRIM4-205ENST00000496896 TRBV7-4A0A0J9YYF1 115 aa2.16□□□□□ -2.06
TRIM4-205ENST00000496896 H3BNG1 76 aa2.16□□□□□ -2.06
TRIM4-205ENST00000496896 PRM2P04554 102 aa2.16□□□□□ -2.06
TRIM4-205ENST00000496896 MIFP14174 115 aa2.16□□□□□ -2.06
TRIM4-205ENST00000496896 REG3AQ06141 175 aa2.16□□□□□ -2.06
TRIM4-205ENST00000496896 C6orf99Q4VX62 202 aa2.16□□□□□ -2.06
TRIM4-205ENST00000496896 KPRPQ5T749 579 aaPredicted RBP2.16□□□□□ -2.06
TRIM4-205ENST00000496896 ENHOQ6UWT2 76 aa2.16□□□□□ -2.06
TRIM4-205ENST00000496896 LAMTOR3Q9UHA4 124 aa2.16□□□□□ -2.06
TRIM4-205ENST00000496896 TRAV23DV6A0A075B6W5 121 aa2.15□□□□□ -2.07
TRIM4-205ENST00000496896 IGKV3OR2-268A0A0C4DH90 116 aa2.15□□□□□ -2.07
TRIM4-205ENST00000496896 ANGP03950 147 aaKnown RBP2.15□□□□□ -2.07
TRIM4-205ENST00000496896 COX7BP24311 80 aa2.15□□□□□ -2.07
TRIM4-205ENST00000496896 ELOF1P60002 83 aaKnown RBP2.15□□□□□ -2.07
TRIM4-205ENST00000496896 SPAG11BQ08648 103 aa2.15□□□□□ -2.07
TRIM4-205ENST00000496896 ANKRD17O75179 2603 aaKnown RBP2.14□□□□□ -2.07
TRIM4-205ENST00000496896 A0A087WVE0 104 aa2.14□□□□□ -2.07
TRIM4-205ENST00000496896 H7BZZ5 65 aa2.14□□□□□ -2.07
TRIM4-205ENST00000496896 M0R378 163 aa2.14□□□□□ -2.07
TRIM4-205ENST00000496896 ZNF73O43830 326 aaPredicted RBP2.14□□□□□ -2.07
TRIM4-205ENST00000496896 SPART-AS1P0CW21 52 aa2.14□□□□□ -2.07
TRIM4-205ENST00000496896 DEFB130BP0DP73 79 aa2.14□□□□□ -2.07
TRIM4-205ENST00000496896 DEFB130AP0DP74 79 aa2.14□□□□□ -2.07
TRIM4-205ENST00000496896 DAD1P61803 113 aa2.14□□□□□ -2.07
TRIM4-205ENST00000496896 Q6ZQY7 126 aa2.14□□□□□ -2.07
TRIM4-205ENST00000496896 C20orf197Q8N268 126 aa2.14□□□□□ -2.07
TRIM4-205ENST00000496896 LINC00269Q8N2A0 174 aa2.14□□□□□ -2.07
TRIM4-205ENST00000496896 HAMPP81172 84 aa2.13□□□□□ -2.07
TRIM4-205ENST00000496896 Q5XG85 94 aa2.13□□□□□ -2.07
TRIM4-205ENST00000496896 FAM19A1Q7Z5A9 133 aa2.13□□□□□ -2.07
TRIM4-205ENST00000496896 C3orf56Q8N813 242 aa2.13□□□□□ -2.07
TRIM4-205ENST00000496896 PRO0628Q9UI54 55 aa2.13□□□□□ -2.07
TRIM4-205ENST00000496896 CSMD1Q96PZ7 3565 aa2.13□□□□□ -2.07
TRIM4-205ENST00000496896 MYO9AB2RTY4 2548 aa2.13□□□□□ -2.07
TRIM4-205ENST00000496896 SPG11Q96JI7 2443 aa2.12□□□□□ -2.07
TRIM4-205ENST00000496896 IGLV5-48A0A075B6I7 105 aa2.12□□□□□ -2.07
TRIM4-205ENST00000496896 BPY2O14599 106 aa2.12□□□□□ -2.07
TRIM4-205ENST00000496896 TLX1NBP0CAT3 122 aa2.12□□□□□ -2.07
TRIM4-205ENST00000496896 FUSP35637 526 aaKnown RBP eCLIP2.12□□□□□ -2.07
TRIM4-205ENST00000496896 NREPQ16612 68 aa2.12□□□□□ -2.07
TRIM4-205ENST00000496896 UNQ6190/PRO20217Q6UXQ8 127 aa2.12□□□□□ -2.07
TRIM4-205ENST00000496896 Q8NAQ8 132 aa2.12□□□□□ -2.07
TRIM4-205ENST00000496896 C11orf68Q9H3H3 251 aaKnown RBP2.12□□□□□ -2.07
TRIM4-205ENST00000496896 ACACBO00763 2458 aa2.12□□□□□ -2.07
TRIM4-205ENST00000496896 PKD1L2Q7Z442 2459 aa2.12□□□□□ -2.07
TRIM4-205ENST00000496896 USP9YO00507 2555 aaPredicted RBP2.11□□□□□ -2.07
TRIM4-205ENST00000496896 NAV2Q8IVL1 2488 aa2.11□□□□□ -2.07
TRIM4-205ENST00000496896 CACNA1AO00555 2505 aa2.11□□□□□ -2.07
TRIM4-205ENST00000496896 F8WEM9 126 aa2.11□□□□□ -2.07
TRIM4-205ENST00000496896 NDUFB1O75438 58 aa2.11□□□□□ -2.07
TRIM4-205ENST00000496896 KRTAP13-2Q52LG2 175 aa2.11□□□□□ -2.07
TRIM4-205ENST00000496896 TMEM254Q8TBM7 123 aa2.11□□□□□ -2.07
TRIM4-205ENST00000496896 CAMK2N2Q96S95 79 aa2.11□□□□□ -2.07
TRIM4-205ENST00000496896 CYSTM1Q9H1C7 97 aa2.11□□□□□ -2.07
TRIM4-205ENST00000496896 WFDC10AQ9H1F0 79 aa2.11□□□□□ -2.07
TRIM4-205ENST00000496896 KCNQ1DNQ9H478 68 aa2.11□□□□□ -2.07
TRIM4-205ENST00000496896 C6orf48Q9UBA6 75 aa2.11□□□□□ -2.07
TRIM4-205ENST00000496896 RELNP78509 3460 aa2.11□□□□□ -2.07
TRIM4-205ENST00000496896 USP9XQ93008 2570 aaPredicted RBP2.1□□□□□ -2.07
TRIM4-205ENST00000496896 SVEP1Q4LDE5 3571 aa2.1□□□□□ -2.07
TRIM4-205ENST00000496896 IGLV10-54A0A075B6I4 117 aa2.1□□□□□ -2.07
TRIM4-205ENST00000496896 A0A096LPF7 62 aa2.1□□□□□ -2.07
TRIM4-205ENST00000496896 A0A0U1RQV1 116 aa2.1□□□□□ -2.07
TRIM4-205ENST00000496896 LCE6AA0A183 80 aa2.1□□□□□ -2.07
TRIM4-205ENST00000496896 OXTP01178 125 aa2.1□□□□□ -2.07
TRIM4-205ENST00000496896 PRR3P79522 188 aaKnown RBP2.1□□□□□ -2.07
TRIM4-205ENST00000496896 C9orf116Q5BN46 136 aaPredicted RBP2.1□□□□□ -2.07
TRIM4-205ENST00000496896 LINC01556Q5JQF7 62 aa2.1□□□□□ -2.07
TRIM4-205ENST00000496896 CLPSL2Q6UWE3 100 aa2.1□□□□□ -2.07
TRIM4-205ENST00000496896 WFDC9Q8NEX5 89 aa2.1□□□□□ -2.07
TRIM4-205ENST00000496896 SPRR4Q96PI1 79 aa2.1□□□□□ -2.07
TRIM4-205ENST00000496896 PKIGQ9Y2B9 76 aa2.1□□□□□ -2.07
TRIM4-205ENST00000496896 NCOR2Q9Y618 2525 aa2.1□□□□□ -2.07
TRIM4-205ENST00000496896 ZFHX3Q15911 3703 aa2.09□□□□□ -2.07
TRIM4-205ENST00000496896 CELSR1Q9NYQ6 3014 aa2.09□□□□□ -2.07
TRIM4-205ENST00000496896 TLN2Q9Y4G6 2542 aa2.09□□□□□ -2.07
TRIM4-205ENST00000496896 H3BPC8 53 aa2.09□□□□□ -2.07
TRIM4-205ENST00000496896 IGKV4-1P06312 121 aa2.09□□□□□ -2.07
TRIM4-205ENST00000496896 C4orf26Q17RF5 130 aa2.09□□□□□ -2.07
TRIM4-205ENST00000496896 ESRGQ1W209 222 aa2.09□□□□□ -2.07
TRIM4-205ENST00000496896 DEFB135Q30KP9 77 aa2.09□□□□□ -2.07
TRIM4-205ENST00000496896 Q5W150 140 aa2.09□□□□□ -2.07
TRIM4-205ENST00000496896 Q6ZRX8 168 aa2.09□□□□□ -2.07
TRIM4-205ENST00000496896 Q8NDZ9 215 aa2.09□□□□□ -2.07
TRIM4-205ENST00000496896 WFDC11Q8NEX6 87 aa2.09□□□□□ -2.07
TRIM4-205ENST00000496896 RMI2Q96E14 147 aa2.09□□□□□ -2.07
TRIM4-205ENST00000496896 V9GYY9 64 aa2.09□□□□□ -2.07
TRIM4-205ENST00000496896 C2CD3Q4AC94 2353 aa2.09□□□□□ -2.08
TRIM4-205ENST00000496896 SPTBN4Q9H254 2564 aa2.08□□□□□ -2.08
TRIM4-205ENST00000496896 ITPR1Q14643 2758 aa2.08□□□□□ -2.08
TRIM4-205ENST00000496896 PTPN13Q12923 2485 aa2.08□□□□□ -2.08
TRIM4-205ENST00000496896 TRAV10A0A0B4J240 114 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 186.3 ms