RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 NHP2Q9NX24 153 aaKnown RBP12.01□□□□□ -0.49
ATG3-208ENST00000495756 CBY1Q9Y3M2 126 aa12.01□□□□□ -0.49
ATG3-208ENST00000495756 RPL13AP40429 203 aaKnown RBP12□□□□□ -0.49
ATG3-208ENST00000495756 Q8N1X5 172 aa12□□□□□ -0.49
ATG3-208ENST00000495756 A0A1B0GWB2 263 aa11.98□□□□□ -0.49
ATG3-208ENST00000495756 BCE1O60756 84 aa11.98□□□□□ -0.49
ATG3-208ENST00000495756 SPRR1AP35321 89 aa11.98□□□□□ -0.49
ATG3-208ENST00000495756 Q5VSD8 79 aa11.98□□□□□ -0.49
ATG3-208ENST00000495756 K7ERJ3 54 aa11.97□□□□□ -0.49
ATG3-208ENST00000495756 ZNF73O43830 326 aaPredicted RBP11.97□□□□□ -0.49
ATG3-208ENST00000495756 PLA2G1BP04054 148 aaKnown RBP11.97□□□□□ -0.49
ATG3-208ENST00000495756 KRTAP10-4P60372 401 aaPredicted RBP11.97□□□□□ -0.49
ATG3-208ENST00000495756 PRO1854Q9UHT4 67 aa11.97□□□□□ -0.49
ATG3-208ENST00000495756 KRTAP4-16G5E9R7 235 aaPredicted RBP11.95□□□□□ -0.5
ATG3-208ENST00000495756 SMIM11BQ8TCY0 68 aa11.95□□□□□ -0.5
ATG3-208ENST00000495756 IGLV7-43P04211 117 aa11.95□□□□□ -0.5
ATG3-208ENST00000495756 PCP4L1A6NKN8 68 aa11.94□□□□□ -0.5
ATG3-208ENST00000495756 H7C2G1 150 aa11.94□□□□□ -0.5
ATG3-208ENST00000495756 FAM19A1Q7Z5A9 133 aa11.94□□□□□ -0.5
ATG3-208ENST00000495756 ETDCA0A1B0GVM5 59 aa11.93□□□□□ -0.5
ATG3-208ENST00000495756 C6orf99Q4VX62 202 aa11.93□□□□□ -0.5
ATG3-208ENST00000495756 DIRC1Q969H9 104 aa11.93□□□□□ -0.5
ATG3-208ENST00000495756 BATFQ16520 125 aa11.92□□□□□ -0.5
ATG3-208ENST00000495756 UBE2AP49459 152 aa11.91□□□□□ -0.5
ATG3-208ENST00000495756 RPL28P46779 137 aaKnown RBP11.9□□□□□ -0.5
ATG3-208ENST00000495756 PRLHP81277 87 aa11.9□□□□□ -0.5
ATG3-208ENST00000495756 KRTAP13-1Q8IUC0 172 aa11.9□□□□□ -0.5
ATG3-208ENST00000495756 B5MCH6 92 aa11.89□□□□□ -0.51
ATG3-208ENST00000495756 Q1RN00 199 aa11.89□□□□□ -0.51
ATG3-208ENST00000495756 H0Y9J4 135 aa11.89□□□□□ -0.51
ATG3-208ENST00000495756 ZNF861PO60384 105 aa11.89□□□□□ -0.51
ATG3-208ENST00000495756 TRBV7-6A0A0J9YX20 115 aa11.88□□□□□ -0.51
ATG3-208ENST00000495756 Q6ZRX8 168 aa11.88□□□□□ -0.51
ATG3-208ENST00000495756 COX7BP24311 80 aa11.86□□□□□ -0.51
ATG3-208ENST00000495756 ELOF1P60002 83 aaKnown RBP11.86□□□□□ -0.51
ATG3-208ENST00000495756 TSPAN13O95857 204 aa11.85□□□□□ -0.51
ATG3-208ENST00000495756 SNHG12Q9BXW3 62 aa11.85□□□□□ -0.51
ATG3-208ENST00000495756 PKHD1L1Q86WI1 4243 aa11.85□□□□□ -0.51
ATG3-208ENST00000495756 VAMP3Q15836 100 aa11.84□□□□□ -0.51
ATG3-208ENST00000495756 SPINK6Q6UWN8 80 aa11.83□□□□□ -0.52
ATG3-208ENST00000495756 Q9BRP9 147 aa11.83□□□□□ -0.52
ATG3-208ENST00000495756 HIGD2AQ9BW72 106 aa11.83□□□□□ -0.52
ATG3-208ENST00000495756 KRTAP4-5Q9BYR2 181 aa11.83□□□□□ -0.52
ATG3-208ENST00000495756 SMCR5Q8TEV8 140 aa11.82□□□□□ -0.52
ATG3-208ENST00000495756 TRIAP1O43715 76 aa11.81□□□□□ -0.52
ATG3-208ENST00000495756 PSMB2P49721 201 aa11.8□□□□□ -0.52
ATG3-208ENST00000495756 DHRS4-AS1Q9P1J3 65 aa11.79□□□□□ -0.52
ATG3-208ENST00000495756 ABCA13Q86UQ4 5058 aa11.79□□□□□ -0.52
ATG3-208ENST00000495756 ERC2-IT1O76042 136 aa11.77□□□□□ -0.52
ATG3-208ENST00000495756 INAFM2P0DMQ5 153 aa11.77□□□□□ -0.52
ATG3-208ENST00000495756 LCE2DQ5TA82 110 aaPredicted RBP11.77□□□□□ -0.52
ATG3-208ENST00000495756 H0YGX0 51 aa11.76□□□□□ -0.53
ATG3-208ENST00000495756 PCLOQ9Y6V0 5065 aa11.76□□□□□ -0.53
ATG3-208ENST00000495756 LINC00575Q6W349 94 aa11.76□□□□□ -0.53
ATG3-208ENST00000495756 COX6CP09669 75 aa11.75□□□□□ -0.53
ATG3-208ENST00000495756 TAX1BP3O14907 124 aa11.74□□□□□ -0.53
ATG3-208ENST00000495756 COL5A1-AS1Q5SY13 56 aa11.74□□□□□ -0.53
ATG3-208ENST00000495756 NAA38Q9BRA0 125 aaKnown RBP11.74□□□□□ -0.53
ATG3-208ENST00000495756 SLC25A20O43772 301 aa11.73□□□□□ -0.53
ATG3-208ENST00000495756 hADV29S1A0JD25 119 aa11.71□□□□□ -0.53
ATG3-208ENST00000495756 FAM218AQ96MZ4 157 aa11.71□□□□□ -0.53
ATG3-208ENST00000495756 C9orf118A6NHY6 69 aa11.7□□□□□ -0.54
ATG3-208ENST00000495756 SCGB1C2P0DMR2 95 aa11.7□□□□□ -0.54
ATG3-208ENST00000495756 FLG2Q5D862 2391 aaPredicted RBP11.7□□□□□ -0.54
ATG3-208ENST00000495756 H3BUT2 72 aa11.7□□□□□ -0.54
ATG3-208ENST00000495756 CLEC2BQ92478 149 aa11.7□□□□□ -0.54
ATG3-208ENST00000495756 ZNF706Q9Y5V0 76 aaPredicted RBP11.7□□□□□ -0.54
ATG3-208ENST00000495756 MYCBP2O75592 4640 aa11.69□□□□□ -0.54
ATG3-208ENST00000495756 ST20-AS1Q8NBB2 130 aa11.69□□□□□ -0.54
ATG3-208ENST00000495756 SPRR4Q96PI1 79 aa11.69□□□□□ -0.54
ATG3-208ENST00000495756 SNCGO76070 127 aa11.67□□□□□ -0.54
ATG3-208ENST00000495756 KRTAP1-4P0C5Y4 121 aa11.67□□□□□ -0.54
ATG3-208ENST00000495756 A0A1B0GX51 115 aa11.65□□□□□ -0.54
ATG3-208ENST00000495756 LRP1Q07954 4544 aaKnown RBP11.65□□□□□ -0.54
ATG3-208ENST00000495756 GAGE2AQ6NT46 116 aa11.64□□□□□ -0.55
ATG3-208ENST00000495756 Q6ZQY7 126 aa11.64□□□□□ -0.55
ATG3-208ENST00000495756 LYRM7Q5U5X0 104 aa11.63□□□□□ -0.55
ATG3-208ENST00000495756 FAT3Q8TDW7 4589 aa11.63□□□□□ -0.55
ATG3-208ENST00000495756 A0A1W2PPM0 123 aa11.63□□□□□ -0.55
ATG3-208ENST00000495756 LST1O00453 97 aa11.63□□□□□ -0.55
ATG3-208ENST00000495756 LINC00483Q53H64 154 aa11.63□□□□□ -0.55
ATG3-208ENST00000495756 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.63□□□□□ -0.55
ATG3-208ENST00000495756 ANAPC11Q9NYG5 84 aa11.63□□□□□ -0.55
ATG3-208ENST00000495756 DEFB105AQ8NG35 78 aa11.62□□□□□ -0.55
ATG3-208ENST00000495756 IGLV5-48A0A075B6I7 105 aa11.61□□□□□ -0.55
ATG3-208ENST00000495756 TCL1BO95988 128 aa11.6□□□□□ -0.55
ATG3-208ENST00000495756 LINC01547P58512 204 aaPredicted RBP11.6□□□□□ -0.55
ATG3-208ENST00000495756 TRACP01848 142 aa11.59□□□□□ -0.55
ATG3-208ENST00000495756 FABP2P12104 132 aa11.59□□□□□ -0.55
ATG3-208ENST00000495756 SPRR1BP22528 89 aa11.59□□□□□ -0.55
ATG3-208ENST00000495756 FAM229BQ4G0N7 80 aa11.59□□□□□ -0.55
ATG3-208ENST00000495756 TEX49A0A1B0GTD5 131 aa11.58□□□□□ -0.56
ATG3-208ENST00000495756 DNAL4O96015 105 aa11.58□□□□□ -0.56
ATG3-208ENST00000495756 TRBV20-1A0A075B6N2 111 aa11.57□□□□□ -0.56
ATG3-208ENST00000495756 ATXN8Q156A1 80 aa11.57□□□□□ -0.56
ATG3-208ENST00000495756 LINC01600Q96MT4 127 aa11.57□□□□□ -0.56
ATG3-208ENST00000495756 A0A087X002 238 aa11.57□□□□□ -0.56
ATG3-208ENST00000495756 Q8N377 158 aa11.57□□□□□ -0.56
ATG3-208ENST00000495756 OCIAD2Q56VL3 154 aa11.56□□□□□ -0.56
ATG3-208ENST00000495756 CRYGAP11844 174 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms